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The map label for this gene is ygfU [H]

Identifier: 93006128

GI number: 93006128

Start: 1587475

End: 1588956

Strand: Direct

Name: ygfU [H]

Synonym: Pcryo_1300

Alternate gene names: 93006128

Gene position: 1587475-1588956 (Clockwise)

Preceding gene: 93006125

Following gene: 93006129

Centisome position: 51.88

GC content: 45.21

Gene sequence:

>1482_bases
ATGGATATTAAATCTACTTCTCAATCGGCAGTTGCCCGCCCAGAAGATGAAAACTTGGGTATTGGTGCCAATATTGCTTA
TGGCTTTCAACACGTACTGACCATGTACGGTGGTATTATTGCGGTTCCATTAATTGTGGGACAGGCAGCTGGATTATTAC
CCGCTGAAATTGGCTTGTTAATTGCCGCCTCATTATTTATCGGTGGTCTTGCGACTTTATTACAAACGATTGGTGTGCCA
TTCTTTGGCTGTCAGCTGCCACTCGTACAAGGTGTATCATTTGCGAGTGTGGCAACCGTGGTTGCGATTGTGACAACGGG
GGGCGGACTACCTTCTGTGTTTGGTGCTGTCATTGCCGCCTCTGCTTTGGGTTTTTTGATCACGCCTATTTTCTCCCAAA
TTATCAAATTCTTCCCGCCATTAGTGACTGGCACCGTCATTACTACTATTGGTTTGACCTTGATGCCAGTCGCTGCCCGC
TGGGCAATGGGCGGCAACAGCAACTTACCTACCTTTGGCAGTATGACCAATATTGGTCTTGCTGGCTTCACGCTAGCGAT
GGTGTTATTACTAAGCAAGCTTGGTAATGCGGCGATCAGTCGCCTATCGATTCTATTAGCGATGGTCATTGGTACTTTTG
CTGCTTGGGCATTAGGCTTGGTTGATTTCTCTGGTATTACGACAGGCTCTATTTTTGCTTTCCCATCACCGTTCCATTTT
GGTATGCCGACCTTTGAGATTGCGGCAATTATCTCTATGTTTATCGTGGTATTGGTTATTTTGGTTGAAACGTCAGCAGA
TATTTTGGCGGTTGGTGATATCATTGAGACAGATATCGATTCAAAACGTTTGGGTAATGGACTACGAGCTGATATGGCAG
CCAGTATGATTGCCCCTATATTTGGCTCATTTACTCAAAGTGCTTTTGCACAAAACGTAGGTCTAGTTGCCGTAACGGGT
GTTAAAAGCCGTTTTGTAGTCGCTTATGCCGGTATTATTTTGGTTATTTTGGGCTTGATGCCGATTATGGGTCGTGTTAT
CGCTACCGTTCCTACCGCCGTACTTGGCGGCGCCGGTATCGTATTGTTTGGTACGGTTGCAGCCAGTGGTATTCGTACGC
TTGCGCAAGTCAGCTACACCAATAATATGAATCTAATCATCGTTGCGACCTCCATCGGTTTTGGTATGCTACCGATTGCC
GCGCCAGCATTTTATGATCAATTTCCAGACTGGTTTGCCACGATTTTCCATTCAGGTATCAGCTCTGCTGCCATCATGGC
CATTGCCCTAAACTTGTTGTTTAACCACTTAAAAGTAGGTAATTCAGACCAACAGTCCGTATTTGTTGCTGGTACAGAAG
ACCGCTCGGTACGTCCTGTAGTGATGATTGATCTATATGAAGGTGATTATTTTACTGAAGGCAAATTGTTTGATTGCGAC
GGTAAAGAGATACCTATATCAAAAGAACCAGCGCATCACTAG

Upstream 100 bases:

>100_bases
AGTATTTGGTTTTATAACAATCTTGAGTCCCACTCTAGGAGTTGTCGAAGAACAAGCCTAGAACATATCAACAACAGAAC
ACGAAGGACGGCTATTTAAT

Downstream 100 bases:

>100_bases
AAGCTAAAATCAGAGGCTAGAAAAATCTGGACAATTAAAGCAAACGTATAAAAAGCTGCCTGTTATGGCAGCTTTTTTTT
GTATAACCTGTTTTATCAAA

Product: uracil-xanthine permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MDIKSTSQSAVARPEDENLGIGANIAYGFQHVLTMYGGIIAVPLIVGQAAGLLPAEIGLLIAASLFIGGLATLLQTIGVP
FFGCQLPLVQGVSFASVATVVAIVTTGGGLPSVFGAVIAASALGFLITPIFSQIIKFFPPLVTGTVITTIGLTLMPVAAR
WAMGGNSNLPTFGSMTNIGLAGFTLAMVLLLSKLGNAAISRLSILLAMVIGTFAAWALGLVDFSGITTGSIFAFPSPFHF
GMPTFEIAAIISMFIVVLVILVETSADILAVGDIIETDIDSKRLGNGLRADMAASMIAPIFGSFTQSAFAQNVGLVAVTG
VKSRFVVAYAGIILVILGLMPIMGRVIATVPTAVLGGAGIVLFGTVAASGIRTLAQVSYTNNMNLIIVATSIGFGMLPIA
APAFYDQFPDWFATIFHSGISSAAIMAIALNLLFNHLKVGNSDQQSVFVAGTEDRSVRPVVMIDLYEGDYFTEGKLFDCD
GKEIPISKEPAHH

Sequences:

>Translated_493_residues
MDIKSTSQSAVARPEDENLGIGANIAYGFQHVLTMYGGIIAVPLIVGQAAGLLPAEIGLLIAASLFIGGLATLLQTIGVP
FFGCQLPLVQGVSFASVATVVAIVTTGGGLPSVFGAVIAASALGFLITPIFSQIIKFFPPLVTGTVITTIGLTLMPVAAR
WAMGGNSNLPTFGSMTNIGLAGFTLAMVLLLSKLGNAAISRLSILLAMVIGTFAAWALGLVDFSGITTGSIFAFPSPFHF
GMPTFEIAAIISMFIVVLVILVETSADILAVGDIIETDIDSKRLGNGLRADMAASMIAPIFGSFTQSAFAQNVGLVAVTG
VKSRFVVAYAGIILVILGLMPIMGRVIATVPTAVLGGAGIVLFGTVAASGIRTLAQVSYTNNMNLIIVATSIGFGMLPIA
APAFYDQFPDWFATIFHSGISSAAIMAIALNLLFNHLKVGNSDQQSVFVAGTEDRSVRPVVMIDLYEGDYFTEGKLFDCD
GKEIPISKEPAHH
>Mature_493_residues
MDIKSTSQSAVARPEDENLGIGANIAYGFQHVLTMYGGIIAVPLIVGQAAGLLPAEIGLLIAASLFIGGLATLLQTIGVP
FFGCQLPLVQGVSFASVATVVAIVTTGGGLPSVFGAVIAASALGFLITPIFSQIIKFFPPLVTGTVITTIGLTLMPVAAR
WAMGGNSNLPTFGSMTNIGLAGFTLAMVLLLSKLGNAAISRLSILLAMVIGTFAAWALGLVDFSGITTGSIFAFPSPFHF
GMPTFEIAAIISMFIVVLVILVETSADILAVGDIIETDIDSKRLGNGLRADMAASMIAPIFGSFTQSAFAQNVGLVAVTG
VKSRFVVAYAGIILVILGLMPIMGRVIATVPTAVLGGAGIVLFGTVAASGIRTLAQVSYTNNMNLIIVATSIGFGMLPIA
APAFYDQFPDWFATIFHSGISSAAIMAIALNLLFNHLKVGNSDQQSVFVAGTEDRSVRPVVMIDLYEGDYFTEGKLFDCD
GKEIPISKEPAHH

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Homo sapiens, GI44680143, Length=164, Percent_Identity=28.6585365853659, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI44680145, Length=164, Percent_Identity=28.6585365853659, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI44680148, Length=180, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI40316845, Length=180, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87082181, Length=481, Percent_Identity=38.8773388773389, Blast_Score=317, Evalue=2e-87,
Organism=Escherichia coli, GI1790087, Length=424, Percent_Identity=32.311320754717, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI87081818, Length=417, Percent_Identity=30.2158273381295, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87082178, Length=435, Percent_Identity=28.0459770114943, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1788843, Length=379, Percent_Identity=27.7044854881267, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17558856, Length=476, Percent_Identity=23.3193277310924, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21356175, Length=466, Percent_Identity=25.1072961373391, Blast_Score=92, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017588
- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 51173; Mature: 51173

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS01116 XANTH_URACIL_PERMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]