| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is minD [C]
Identifier: 93006125
GI number: 93006125
Start: 1582798
End: 1583814
Strand: Direct
Name: minD [C]
Synonym: Pcryo_1297
Alternate gene names: 93006125
Gene position: 1582798-1583814 (Clockwise)
Preceding gene: 93006124
Following gene: 93006128
Centisome position: 51.73
GC content: 46.8
Gene sequence:
>1017_bases ATGGCATTACATCCATTGCCTGCATTGGTAGAGCAATTAATGACACAGCCGATTATATTTATCGGTGGAAAGGGCGGTGT CGGTAAAACTACCACTGCCGCTGCACTTGCCAGCTATTATGCCAATCAAGGTAAAAAGACACTGATTGTCTCGACCGATC CAGCACACAGCTTGGGCGATGTATTAAACGTCCCGCTCAAAAACCAAAAAACAGCAGTAACTTCTTATCTAGATGCTATT GAACTAAACCCTGATATCATCGTCGATGAGCATTTTGCCCAAGTTGAACGCACCATTACTTCCTATGCAAACCCAGACAT GATGCCAAAAATTCGCGAGCATCTACGGCTATCAAAATCAGCACCTGGTGCACAAGAAGCCGCGATGCTCGAATCCATGT GTCACCATCTAGTCGAAGCAGCAGATGCCGGCTATGAGCACGTTATTTTTGATACCGCACCGACGGGACATACACTGCGT TTATTAGTGCTGCCTGAGATGATGGGGGCATGGACGGATGGATTGCTAGCGCAGCAGCGAAGGCAAGCAAAACTGCGCTC AGTGGCAAATCATTTGGGCAGTCATGAACAAGACAATAATAAAAACGACTTAGCCAATCCGTTTGCCGCAAAAAAAACCG ACCGCTGGGAGCAAGCAGTATCCGTACTAGAAAAACGCAAACAGCTGTTTCGTCAGGCAGGGTTGCTGCTTCATGACCGT ACACAAACCGCCATTGTATTAGTGATGACGGCTGACGTATTGCCACTGGCTGAAACAAAGCGAGCGATAGAGCAGTTAGA AGACAGTAAACTTATGCCAGCCGCAATCGTTATCAATCAGTTGATATCTCCGACGCAGTCCGATACGTTTTGGCATCGTC GTGCTGAGCGCCAACAGCAATTAATGCAAGATATTGAAAAGAATTTTTCCGAGTATCCGCTATACCCAATATATCTGCAG CAAACCGACGTACGCGGTACTGATGCCTTAAGTGCATTAGTAAGCCCGGCATCATAA
Upstream 100 bases:
>100_bases TTTCCATGAATGGCATACACGCATGGGCATGGATAGATGCCCTTTTGACCATGTTGGTTGCTGCTAGTTTCCTTTGAATT AATTAAAACGAGATAAAAGT
Downstream 100 bases:
>100_bases AGCCCGTCAGTAAGAGATATTATCTTTAACATGTTTATGCATTATTGCTGACCCTGATACGACGACAGCTTACTTGCCAG CGACCATGCCATATCTGCGC
Product: arsenite-transporting ATPase
Products: NA
Alternate protein names: Arsenical resistance ATPase; Arsenite-translocating ATPase; Arsenite-transporting ATPase [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MALHPLPALVEQLMTQPIIFIGGKGGVGKTTTAAALASYYANQGKKTLIVSTDPAHSLGDVLNVPLKNQKTAVTSYLDAI ELNPDIIVDEHFAQVERTITSYANPDMMPKIREHLRLSKSAPGAQEAAMLESMCHHLVEAADAGYEHVIFDTAPTGHTLR LLVLPEMMGAWTDGLLAQQRRQAKLRSVANHLGSHEQDNNKNDLANPFAAKKTDRWEQAVSVLEKRKQLFRQAGLLLHDR TQTAIVLVMTADVLPLAETKRAIEQLEDSKLMPAAIVINQLISPTQSDTFWHRRAERQQQLMQDIEKNFSEYPLYPIYLQ QTDVRGTDALSALVSPAS
Sequences:
>Translated_338_residues MALHPLPALVEQLMTQPIIFIGGKGGVGKTTTAAALASYYANQGKKTLIVSTDPAHSLGDVLNVPLKNQKTAVTSYLDAI ELNPDIIVDEHFAQVERTITSYANPDMMPKIREHLRLSKSAPGAQEAAMLESMCHHLVEAADAGYEHVIFDTAPTGHTLR LLVLPEMMGAWTDGLLAQQRRQAKLRSVANHLGSHEQDNNKNDLANPFAAKKTDRWEQAVSVLEKRKQLFRQAGLLLHDR TQTAIVLVMTADVLPLAETKRAIEQLEDSKLMPAAIVINQLISPTQSDTFWHRRAERQQQLMQDIEKNFSEYPLYPIYLQ QTDVRGTDALSALVSPAS >Mature_337_residues ALHPLPALVEQLMTQPIIFIGGKGGVGKTTTAAALASYYANQGKKTLIVSTDPAHSLGDVLNVPLKNQKTAVTSYLDAIE LNPDIIVDEHFAQVERTITSYANPDMMPKIREHLRLSKSAPGAQEAAMLESMCHHLVEAADAGYEHVIFDTAPTGHTLRL LVLPEMMGAWTDGLLAQQRRQAKLRSVANHLGSHEQDNNKNDLANPFAAKKTDRWEQAVSVLEKRKQLFRQAGLLLHDRT QTAIVLVMTADVLPLAETKRAIEQLEDSKLMPAAIVINQLISPTQSDTFWHRRAERQQQLMQDIEKNFSEYPLYPIYLQQ TDVRGTDALSALVSPAS
Specific function: Anion-transporting ATPase. Catalyzes the extrusion of arsenite [H]
COG id: COG0003
COG function: function code P; Oxyanion-translocating ATPase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arsA ATPase family [H]
Homologues:
Organism=Homo sapiens, GI50428938, Length=313, Percent_Identity=27.7955271565495, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17557003, Length=314, Percent_Identity=25.4777070063694, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320103, Length=323, Percent_Identity=23.8390092879257, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24586297, Length=348, Percent_Identity=27.2988505747126, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003348 [H]
Pfam domain/function: NA
EC number: =3.6.3.16 [H]
Molecular weight: Translated: 37440; Mature: 37309
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHPLPALVEQLMTQPIIFIGGKGGVGKTTTAAALASYYANQGKKTLIVSTDPAHSLGD CCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH VLNVPLKNQKTAVTSYLDAIELNPDIIVDEHFAQVERTITSYANPDMMPKIREHLRLSKS HHCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC APGAQEAAMLESMCHHLVEAADAGYEHVIFDTAPTGHTLRLLVLPEMMGAWTDGLLAQQR CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHH RQAKLRSVANHLGSHEQDNNKNDLANPFAAKKTDRWEQAVSVLEKRKQLFRQAGLLLHDR HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECC TQTAIVLVMTADVLPLAETKRAIEQLEDSKLMPAAIVINQLISPTQSDTFWHRRAERQQQ CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH LMQDIEKNFSEYPLYPIYLQQTDVRGTDALSALVSPAS HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCC >Mature Secondary Structure ALHPLPALVEQLMTQPIIFIGGKGGVGKTTTAAALASYYANQGKKTLIVSTDPAHSLGD CCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH VLNVPLKNQKTAVTSYLDAIELNPDIIVDEHFAQVERTITSYANPDMMPKIREHLRLSKS HHCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC APGAQEAAMLESMCHHLVEAADAGYEHVIFDTAPTGHTLRLLVLPEMMGAWTDGLLAQQR CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHH RQAKLRSVANHLGSHEQDNNKNDLANPFAAKKTDRWEQAVSVLEKRKQLFRQAGLLLHDR HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECC TQTAIVLVMTADVLPLAETKRAIEQLEDSKLMPAAIVINQLISPTQSDTFWHRRAERQQQ CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH LMQDIEKNFSEYPLYPIYLQQTDVRGTDALSALVSPAS HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]