Click here to switch to the map view.

The map label for this gene is cpsA1 [H]

Identifier: 93006086

GI number: 93006086

Start: 1528957

End: 1530252

Strand: Reverse

Name: cpsA1 [H]

Synonym: Pcryo_1258

Alternate gene names: 93006086

Gene position: 1530252-1528957 (Counterclockwise)

Preceding gene: 93006087

Following gene: 93006085

Centisome position: 50.01

GC content: 41.67

Gene sequence:

>1296_bases
ATGAAACGATCATTATTATCATTGGTTATCGGTATTTTTACTTTTAGCACATTTAGTGCTCATGCCAACATCAATATCGA
TAAAGAAGTTAAAAGTGTTGAAAGAAAAGTGATTGAATGGCGTCGGGATATTCACAAACATCCCGAATTGAGCAATAGAG
AAACTCGTACTGCCGCTCTTGTTGCCAAGCATCTAAAATCACTAGGTATGCAGGTCGAAACTGATATAGCGCATACAGGT
GTTGTTGGTTTTTTGAAGGGAGCTAAACCTGGCCCTACAGTGATGCTACGTGCAGACATGGACGCATTACCCGTTACCGA
AAAAGCAGATGTGCCTTTTAAATCAACCATTGTGACTAAGTATATGGGTGAAGACGTTGGGGTCATGCATGCCTGCGGAC
ACGATACTCATGTTGCTATGCTAATGGGAACGGCTGAAGTACTAGCTGCGGTTAAAAATGAATTGCACGGCAATATCATG
TTTGTATTTCAGCCTGCCGAAGAAGGTGCCCCTGAAGGTGAAGAAGGCGGCGCTGAGCTCATGCTGAAGCAAGGCATATT
CAAAAAACATAAACCCGAGGTCGCGTTTGGACTACATATTATGTCGAGCTTAAATAGTGGTCAAATTGGTTACCGAAGCG
GCCCTATTATGGCAAGCGCTGATACCTTTGACATAACAGTAAATGGTAAGCAAACTCATGGCTCAGCGCCCTGGAATGGG
GTCGATCCTATTTCAACTGCGGCGCAAATCGTTACCGGTGTTAATCATATAGTGAGCCGTCAGATTGATATTACTAAAGA
GCCGGCTATTGTCTCATTCGGTAAAATAGGTGGCGGTGTACGCGATAATATTATTCCAGATAGTGTCAATATGATTGGTA
CTATTCGTAACTTTGATATGGATAATCGCGACCAAATTTTTGATAAGATGAAAACCACGGCCACTCATATCGCAATAGCA
TCAGGCGCTAAAGCTGACGTCAAAATCAATAAAGGTTATCCAGTTACGATTAATGACCCAGCGCTTACCGCGCAAATGTT
ACCAACGCTTAAAAATGTAGCAGGTAAAGACAATGTACTTGAGGTGCCTAAACTAACGGCATCTGAAGATTTCTCATTTT
ATGCCCAAGAAATACCTAGTTTATTTTTCTTTTTAGGCGGCACTCCAGTAGGACAAGACGTTAGCAAGGCGCCATATAAT
CATTCCCCATACTTTTATGTAGACGAATCATCATTCAAAGTTGGTACTAAAGCGCTTAGCCAACTAGCAATAGATTATTT
GGCTATGAAAAAATAA

Upstream 100 bases:

>100_bases
GACAATATTTAAATGTTCAATAGCTCTATTGGTCACTAAAATTATCACATGAGCATATCAAAGCAATAACAAGGAAGTAC
CATCAAACAAGGAAGACAGT

Downstream 100 bases:

>100_bases
CTTTCTAAAAGAGCAATATCTATTGGTATGAGCACTTGCTTAACTCAATAATTAAAGTCGTCATTTTATCTCTTACAACC
GATATAATTTAATAAAAATC

Product: peptidase M20D, amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKRSLLSLVIGIFTFSTFSAHANINIDKEVKSVERKVIEWRRDIHKHPELSNRETRTAALVAKHLKSLGMQVETDIAHTG
VVGFLKGAKPGPTVMLRADMDALPVTEKADVPFKSTIVTKYMGEDVGVMHACGHDTHVAMLMGTAEVLAAVKNELHGNIM
FVFQPAEEGAPEGEEGGAELMLKQGIFKKHKPEVAFGLHIMSSLNSGQIGYRSGPIMASADTFDITVNGKQTHGSAPWNG
VDPISTAAQIVTGVNHIVSRQIDITKEPAIVSFGKIGGGVRDNIIPDSVNMIGTIRNFDMDNRDQIFDKMKTTATHIAIA
SGAKADVKINKGYPVTINDPALTAQMLPTLKNVAGKDNVLEVPKLTASEDFSFYAQEIPSLFFFLGGTPVGQDVSKAPYN
HSPYFYVDESSFKVGTKALSQLAIDYLAMKK

Sequences:

>Translated_431_residues
MKRSLLSLVIGIFTFSTFSAHANINIDKEVKSVERKVIEWRRDIHKHPELSNRETRTAALVAKHLKSLGMQVETDIAHTG
VVGFLKGAKPGPTVMLRADMDALPVTEKADVPFKSTIVTKYMGEDVGVMHACGHDTHVAMLMGTAEVLAAVKNELHGNIM
FVFQPAEEGAPEGEEGGAELMLKQGIFKKHKPEVAFGLHIMSSLNSGQIGYRSGPIMASADTFDITVNGKQTHGSAPWNG
VDPISTAAQIVTGVNHIVSRQIDITKEPAIVSFGKIGGGVRDNIIPDSVNMIGTIRNFDMDNRDQIFDKMKTTATHIAIA
SGAKADVKINKGYPVTINDPALTAQMLPTLKNVAGKDNVLEVPKLTASEDFSFYAQEIPSLFFFLGGTPVGQDVSKAPYN
HSPYFYVDESSFKVGTKALSQLAIDYLAMKK
>Mature_431_residues
MKRSLLSLVIGIFTFSTFSAHANINIDKEVKSVERKVIEWRRDIHKHPELSNRETRTAALVAKHLKSLGMQVETDIAHTG
VVGFLKGAKPGPTVMLRADMDALPVTEKADVPFKSTIVTKYMGEDVGVMHACGHDTHVAMLMGTAEVLAAVKNELHGNIM
FVFQPAEEGAPEGEEGGAELMLKQGIFKKHKPEVAFGLHIMSSLNSGQIGYRSGPIMASADTFDITVNGKQTHGSAPWNG
VDPISTAAQIVTGVNHIVSRQIDITKEPAIVSFGKIGGGVRDNIIPDSVNMIGTIRNFDMDNRDQIFDKMKTTATHIAIA
SGAKADVKINKGYPVTINDPALTAQMLPTLKNVAGKDNVLEVPKLTASEDFSFYAQEIPSLFFFLGGTPVGQDVSKAPYN
HSPYFYVDESSFKVGTKALSQLAIDYLAMKK

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=450, Percent_Identity=25.7777777777778, Blast_Score=111, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 46736; Mature: 46736

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLLSLVIGIFTFSTFSAHANINIDKEVKSVERKVIEWRRDIHKHPELSNRETRTAAL
CCHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VAKHLKSLGMQVETDIAHTGVVGFLKGAKPGPTVMLRADMDALPVTEKADVPFKSTIVTK
HHHHHHHCCCEEECCHHHHCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
YMGEDVGVMHACGHDTHVAMLMGTAEVLAAVKNELHGNIMFVFQPAEEGAPEGEEGGAEL
HHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH
MLKQGIFKKHKPEVAFGLHIMSSLNSGQIGYRSGPIMASADTFDITVNGKQTHGSAPWNG
HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC
VDPISTAAQIVTGVNHIVSRQIDITKEPAIVSFGKIGGGVRDNIIPDSVNMIGTIRNFDM
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCCCCCCCCCCCCHHHEEEEECCCC
DNRDQIFDKMKTTATHIAIASGAKADVKINKGYPVTINDPALTAQMLPTLKNVAGKDNVL
CCHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCEE
EVPKLTASEDFSFYAQEIPSLFFFLGGTPVGQDVSKAPYNHSPYFYVDESSFKVGTKALS
ECCCCCCCCCHHHHHHHHHHHEEHCCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHH
QLAIDYLAMKK
HHHHHHHHCCC
>Mature Secondary Structure
MKRSLLSLVIGIFTFSTFSAHANINIDKEVKSVERKVIEWRRDIHKHPELSNRETRTAAL
CCHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VAKHLKSLGMQVETDIAHTGVVGFLKGAKPGPTVMLRADMDALPVTEKADVPFKSTIVTK
HHHHHHHCCCEEECCHHHHCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
YMGEDVGVMHACGHDTHVAMLMGTAEVLAAVKNELHGNIMFVFQPAEEGAPEGEEGGAEL
HHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH
MLKQGIFKKHKPEVAFGLHIMSSLNSGQIGYRSGPIMASADTFDITVNGKQTHGSAPWNG
HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCC
VDPISTAAQIVTGVNHIVSRQIDITKEPAIVSFGKIGGGVRDNIIPDSVNMIGTIRNFDM
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCCCCCCCCCCCCCHHHEEEEECCCC
DNRDQIFDKMKTTATHIAIASGAKADVKINKGYPVTINDPALTAQMLPTLKNVAGKDNVL
CCHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCEE
EVPKLTASEDFSFYAQEIPSLFFFLGGTPVGQDVSKAPYNHSPYFYVDESSFKVGTKALS
ECCCCCCCCCHHHHHHHHHHHEEHCCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHH
QLAIDYLAMKK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]