| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006068
Identifier: 93006068
GI number: 93006068
Start: 1510899
End: 1512038
Strand: Direct
Name: 93006068
Synonym: Pcryo_1240
Alternate gene names: NA
Gene position: 1510899-1512038 (Clockwise)
Preceding gene: 93006067
Following gene: 93006074
Centisome position: 49.38
GC content: 44.65
Gene sequence:
>1140_bases ATGCATATCACGGCAAATTTTGACGCGGGCAATATTGAGGTTATTAGTTTAGAAGATAAAAAAGATATCCAATTGGCTAT TCGTCCGGACGTCGGTGGCGAGTTTTTTCAATGGTTTAACTTTCGTATAACCGGTCAAATTGGCGAGCAATATGTGCTCA ATATCCTAAATGCAGGGGAAGCCGCGTTTCCTGGAGGGTGGGAGAGTTATCAAGCAGTTGCTTCCTATGATCGTGAGTAT TGGTTCCGCCTGCCCACCTCTTATAAAGACGGCAAGCTGACCATAAACGTAGACATGGAATGTGAAACCATTCAAATTGC TTTTTTTGCTCCTTACAGCTATGAGCGTCATCAAGATTTATTAGCCGCTGTACAAATGCATCCATTTGTGACGTTAGAGC ATTTAGGTGAAACGCTTGATAAGCGCGACTTAACCTTAGTTAAAATTAGTGATGGCGATAGCAGTAGTGACGAGAGTAAG CGCAACATTTGGATCACGGCGCGTCAGCATCCCGGTGAGACCATGGCTGAATGGTTAGTCGAAGGTCTCATGTATAGCTT ATTAGACGGTGATAATGCGACTGGCAAATTATTATTAGATAAAGCAAACTTTTATATTGTGCCGAATATGAACCCCGACG GCAGTGTACGTGGTCACCTACGTACTAATGCAGTCGGAACGAACCTAAACCGCGCCTGGTCAAATCCGAGTTTAGAAAAA AGCCCTGAAGTGTTTCATGTTATTAAGAAAATGGAAGCGACTGGCGTTGATCTATTCTATGATGTACATGGTGACGAAGA GATACCTTTTGTCTTCCTTGCTGGCTCTCAAGGGACGCCTAATTATAATGACCGACTCGCCCGACTCCGTGATAGATTTG CAGAAGTGTTAAAGCTGGCCAGTGCTGACTTTCAGACTGAAGAAGGCTATGACGTTGATGCACCGGGTACAGCGAATATG ACGCTCGCCACTCACTGGGTGGCCGAACGTTTTGACTGCCTAGCCAATACTTTAGAGATGCCGTTCATAGATAACAATAA TGTACCTGATGCAGATACGGGTTGGTCACCAGAGCGTTCTATTAAATTGGGAGAAGCGTCGCTAGTTGCCATGTTAGCGG TCGTTGATGATTTACGCTAA
Upstream 100 bases:
>100_bases GGCATAGCTCATTTTTGCGTTGACTGCTACACTATTACACTATCTGATACTCCAACATATTCTTTAAAGCACTACCATAA AAACTGATTAAGGACAGGTT
Downstream 100 bases:
>100_bases TTAATAGCTTCTCTAATCCTAATTTTATAACACCACATAAGAAAAACCATCATAAAAAGGTTGTTATCGCTATTTTTAAT ATAGCGATAACAACCTTTTT
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MHITANFDAGNIEVISLEDKKDIQLAIRPDVGGEFFQWFNFRITGQIGEQYVLNILNAGEAAFPGGWESYQAVASYDREY WFRLPTSYKDGKLTINVDMECETIQIAFFAPYSYERHQDLLAAVQMHPFVTLEHLGETLDKRDLTLVKISDGDSSSDESK RNIWITARQHPGETMAEWLVEGLMYSLLDGDNATGKLLLDKANFYIVPNMNPDGSVRGHLRTNAVGTNLNRAWSNPSLEK SPEVFHVIKKMEATGVDLFYDVHGDEEIPFVFLAGSQGTPNYNDRLARLRDRFAEVLKLASADFQTEEGYDVDAPGTANM TLATHWVAERFDCLANTLEMPFIDNNNVPDADTGWSPERSIKLGEASLVAMLAVVDDLR
Sequences:
>Translated_379_residues MHITANFDAGNIEVISLEDKKDIQLAIRPDVGGEFFQWFNFRITGQIGEQYVLNILNAGEAAFPGGWESYQAVASYDREY WFRLPTSYKDGKLTINVDMECETIQIAFFAPYSYERHQDLLAAVQMHPFVTLEHLGETLDKRDLTLVKISDGDSSSDESK RNIWITARQHPGETMAEWLVEGLMYSLLDGDNATGKLLLDKANFYIVPNMNPDGSVRGHLRTNAVGTNLNRAWSNPSLEK SPEVFHVIKKMEATGVDLFYDVHGDEEIPFVFLAGSQGTPNYNDRLARLRDRFAEVLKLASADFQTEEGYDVDAPGTANM TLATHWVAERFDCLANTLEMPFIDNNNVPDADTGWSPERSIKLGEASLVAMLAVVDDLR >Mature_379_residues MHITANFDAGNIEVISLEDKKDIQLAIRPDVGGEFFQWFNFRITGQIGEQYVLNILNAGEAAFPGGWESYQAVASYDREY WFRLPTSYKDGKLTINVDMECETIQIAFFAPYSYERHQDLLAAVQMHPFVTLEHLGETLDKRDLTLVKISDGDSSSDESK RNIWITARQHPGETMAEWLVEGLMYSLLDGDNATGKLLLDKANFYIVPNMNPDGSVRGHLRTNAVGTNLNRAWSNPSLEK SPEVFHVIKKMEATGVDLFYDVHGDEEIPFVFLAGSQGTPNYNDRLARLRDRFAEVLKLASADFQTEEGYDVDAPGTANM TLATHWVAERFDCLANTLEMPFIDNNNVPDADTGWSPERSIKLGEASLVAMLAVVDDLR
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI222352158, Length=306, Percent_Identity=27.7777777777778, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI190194403, Length=298, Percent_Identity=26.8456375838926, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI170763513, Length=322, Percent_Identity=25.776397515528, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI31657119, Length=329, Percent_Identity=26.1398176291793, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI120444924, Length=371, Percent_Identity=26.1455525606469, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI78482633, Length=288, Percent_Identity=25.6944444444444, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI118421091, Length=292, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI115533904, Length=401, Percent_Identity=26.1845386533666, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193202888, Length=309, Percent_Identity=22.6537216828479, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24641847, Length=327, Percent_Identity=25.9938837920489, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI28571179, Length=205, Percent_Identity=31.219512195122, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI161077807, Length=205, Percent_Identity=31.219512195122, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24641845, Length=205, Percent_Identity=31.219512195122, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24651466, Length=274, Percent_Identity=28.4671532846715, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 42574; Mature: 42574
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHITANFDAGNIEVISLEDKKDIQLAIRPDVGGEFFQWFNFRITGQIGEQYVLNILNAGE CEEEEECCCCCEEEEEECCCCCEEEEEECCCCHHHHEEEEEEEEECCCHHHHHHHHCCCC AAFPGGWESYQAVASYDREYWFRLPTSYKDGKLTINVDMECETIQIAFFAPYSYERHQDL CCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCEEEEEEEEECCCCCHHHHHH LAAVQMHPFVTLEHLGETLDKRDLTLVKISDGDSSSDESKRNIWITARQHPGETMAEWLV HHHHHHCCCEEHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHH EGLMYSLLDGDNATGKLLLDKANFYIVPNMNPDGSVRGHLRTNAVGTNLNRAWSNPSLEK HHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCC SPEVFHVIKKMEATGVDLFYDVHGDEEIPFVFLAGSQGTPNYNDRLARLRDRFAEVLKLA CCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH SADFQTEEGYDVDAPGTANMTLATHWVAERFDCLANTLEMPFIDNNNVPDADTGWSPERS CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC IKLGEASLVAMLAVVDDLR EEECHHHHHHHHHHHHCCC >Mature Secondary Structure MHITANFDAGNIEVISLEDKKDIQLAIRPDVGGEFFQWFNFRITGQIGEQYVLNILNAGE CEEEEECCCCCEEEEEECCCCCEEEEEECCCCHHHHEEEEEEEEECCCHHHHHHHHCCCC AAFPGGWESYQAVASYDREYWFRLPTSYKDGKLTINVDMECETIQIAFFAPYSYERHQDL CCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCEEEEEEEEECCCCCHHHHHH LAAVQMHPFVTLEHLGETLDKRDLTLVKISDGDSSSDESKRNIWITARQHPGETMAEWLV HHHHHHCCCEEHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHH EGLMYSLLDGDNATGKLLLDKANFYIVPNMNPDGSVRGHLRTNAVGTNLNRAWSNPSLEK HHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCC SPEVFHVIKKMEATGVDLFYDVHGDEEIPFVFLAGSQGTPNYNDRLARLRDRFAEVLKLA CCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH SADFQTEEGYDVDAPGTANMTLATHWVAERFDCLANTLEMPFIDNNNVPDADTGWSPERS CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC IKLGEASLVAMLAVVDDLR EEECHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]