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The map label for this gene is ybgC [C]

Identifier: 93006019

GI number: 93006019

Start: 1443590

End: 1444159

Strand: Reverse

Name: ybgC [C]

Synonym: Pcryo_1191

Alternate gene names: 93006019

Gene position: 1444159-1443590 (Counterclockwise)

Preceding gene: 93006023

Following gene: 93006018

Centisome position: 47.2

GC content: 40.18

Gene sequence:

>570_bases
ATGACAAAAGCAACTGATAAGAACCCAACTGCCGTATCAAAACCTCACATAATTACGCCGTTATTTGCGACCAACTATAA
TGTCTACATCAATCATACTGATGCTGGCGGTATAGTCTATCATGCCAATCACTTAGTATTCTTTGAAAACTGCCGCCGCG
ATTGGTTTACTCAATTGGGATTAAATGGTTATTTCTTGGAGACCAATGACGGTCAGATTCAGCATTTCGTCGTCACTCAA
GCGGACTTGCAATATAAGCGCGCTATTTTATTAGATGAGGTCATTAATGTACGCATTGATAACGTTGAGATAAAACCTGC
CAGCATTGTATTTTATCAAAGCATTTATCGTCAGCCCTCTCAAGAGAACACTACCGACACTGTAAAAGCGGTTTTGCTAA
GCAGCACTAAAATCGTTGTTGCCTGTGTACAAAATCAAATCACACCGGATGCTATAGAGAATGATGCGTCAAATAAAACC
ATCTCAAATACCGCGCCAATGCGCCCTATTCGTGTGCCAAAAAAATTGCGTGTTGCTATTGAGCAAGCAATTTCAGAATA
CAATAAGTAG

Upstream 100 bases:

>100_bases
TCTTATTGACTATCCTACTTTTTATTAAATCATGCTTATCAAGCAGCGGCATTTAAACAACTTATAACACCCTATTATTA
AAAATCTATTGAGCATTATT

Downstream 100 bases:

>100_bases
CTTCTATAATAATTGATTTCTTAAATATCTTTAGAAAAATCTGTTTTTCCTACGACAATAATTAGTCATCTTCTCTTTTT
GTATGATATATAGAATCGAT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Pol-Pal System-Associated Acyl-CoA Thioesterase; Thioesterase Protein

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTKATDKNPTAVSKPHIITPLFATNYNVYINHTDAGGIVYHANHLVFFENCRRDWFTQLGLNGYFLETNDGQIQHFVVTQ
ADLQYKRAILLDEVINVRIDNVEIKPASIVFYQSIYRQPSQENTTDTVKAVLLSSTKIVVACVQNQITPDAIENDASNKT
ISNTAPMRPIRVPKKLRVAIEQAISEYNK

Sequences:

>Translated_189_residues
MTKATDKNPTAVSKPHIITPLFATNYNVYINHTDAGGIVYHANHLVFFENCRRDWFTQLGLNGYFLETNDGQIQHFVVTQ
ADLQYKRAILLDEVINVRIDNVEIKPASIVFYQSIYRQPSQENTTDTVKAVLLSSTKIVVACVQNQITPDAIENDASNKT
ISNTAPMRPIRVPKKLRVAIEQAISEYNK
>Mature_188_residues
TKATDKNPTAVSKPHIITPLFATNYNVYINHTDAGGIVYHANHLVFFENCRRDWFTQLGLNGYFLETNDGQIQHFVVTQA
DLQYKRAILLDEVINVRIDNVEIKPASIVFYQSIYRQPSQENTTDTVKAVLLSSTKIVVACVQNQITPDAIENDASNKTI
SNTAPMRPIRVPKKLRVAIEQAISEYNK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21367; Mature: 21235

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKATDKNPTAVSKPHIITPLFATNYNVYINHTDAGGIVYHANHLVFFENCRRDWFTQLG
CCCCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCCEEEECCEEEEEEHHHHHHHHHCC
LNGYFLETNDGQIQHFVVTQADLQYKRAILLDEVINVRIDNVEIKPASIVFYQSIYRQPS
CCEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCEEECCEEECCHHHHEEHHHHCCCC
QENTTDTVKAVLLSSTKIVVACVQNQITPDAIENDASNKTISNTAPMRPIRVPKKLRVAI
CCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCCEECCCCCCCCCCCCHHHHHHH
EQAISEYNK
HHHHHHHCC
>Mature Secondary Structure 
TKATDKNPTAVSKPHIITPLFATNYNVYINHTDAGGIVYHANHLVFFENCRRDWFTQLG
CCCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCCEEEECCEEEEEEHHHHHHHHHCC
LNGYFLETNDGQIQHFVVTQADLQYKRAILLDEVINVRIDNVEIKPASIVFYQSIYRQPS
CCEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHCEEECCEEECCHHHHEEHHHHCCCC
QENTTDTVKAVLLSSTKIVVACVQNQITPDAIENDASNKTISNTAPMRPIRVPKKLRVAI
CCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCCEECCCCCCCCCCCCHHHHHHH
EQAISEYNK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA