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The map label for this gene is 93005960

Identifier: 93005960

GI number: 93005960

Start: 1367280

End: 1367924

Strand: Direct

Name: 93005960

Synonym: Pcryo_1132

Alternate gene names: NA

Gene position: 1367280-1367924 (Clockwise)

Preceding gene: 93005959

Following gene: 93005965

Centisome position: 44.68

GC content: 44.19

Gene sequence:

>645_bases
ATGAACACTATCATCATGAAAATAACTATCATGAAAAGCATGACACCTAAGATGCTGATGATCATGCTGTTAAGCAGCAG
CGCATTATTAGGCTGTAGTCAAAAAGCAGGCGATGTAGAGACGATAGCCAGTAAGCACGATGCTGAGCAAACGGTTGACT
ATCAAGCAAGTCGCAATACAGGCAGCTGGGGCGCTGTCTATATGAGCCGTGACGAGCTAAAAGCGCAGCCTATCAATGTC
GTTGATGACAGCTCATTACCCAATATGGAAAATGACCCTATTATTAGCGAGTGGGAAGCAAAATTTGAAGGATCCAATGC
CTTTATTACGACCGATGGCAAAAAGCTCTATCATGACTCCTGTGCTGGCTGTCATATGCATAAAGGCGAAGGCGCTTATG
GTGCAGGCTATTATCCGCCACTGGCTAACAATAGCAAAATGCAGTCAAAATATTACATCATTAATATACTCATCAATGGT
TTCCGCGGAATGCCATCGTTTCATATGATGATGAATGATGAGCAAATGGCGGCAGTGACTCAATACGTCGTCAGTGACTT
AAATAGTTATACGGATACAGTGACCGCTGAAGACGTGGCCAAGCTGAGACATGCCAATCCGCCCGGTTATGATCCAAGTG
AATAG

Upstream 100 bases:

>100_bases
TATCTGGCATAGATGCCGCTAAACGCTTGCATAAAAAAGCAAAAATGCTGGGTTAATTGCGCCAAAAATAGAGACAATTA
TTATAAATTCAGAGGCTATC

Downstream 100 bases:

>100_bases
TGTTGCTGTGAACAATGTTTCCTTAGAATAAAAGCTAATCGATTTACTCTCATATAAAAAAGCGCCCAATCGATGATTGG
GCGCTTTTCTTGGTTAAGAC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C Family Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MNTIIMKITIMKSMTPKMLMIMLLSSSALLGCSQKAGDVETIASKHDAEQTVDYQASRNTGSWGAVYMSRDELKAQPINV
VDDSSLPNMENDPIISEWEAKFEGSNAFITTDGKKLYHDSCAGCHMHKGEGAYGAGYYPPLANNSKMQSKYYIINILING
FRGMPSFHMMMNDEQMAAVTQYVVSDLNSYTDTVTAEDVAKLRHANPPGYDPSE

Sequences:

>Translated_214_residues
MNTIIMKITIMKSMTPKMLMIMLLSSSALLGCSQKAGDVETIASKHDAEQTVDYQASRNTGSWGAVYMSRDELKAQPINV
VDDSSLPNMENDPIISEWEAKFEGSNAFITTDGKKLYHDSCAGCHMHKGEGAYGAGYYPPLANNSKMQSKYYIINILING
FRGMPSFHMMMNDEQMAAVTQYVVSDLNSYTDTVTAEDVAKLRHANPPGYDPSE
>Mature_214_residues
MNTIIMKITIMKSMTPKMLMIMLLSSSALLGCSQKAGDVETIASKHDAEQTVDYQASRNTGSWGAVYMSRDELKAQPINV
VDDSSLPNMENDPIISEWEAKFEGSNAFITTDGKKLYHDSCAGCHMHKGEGAYGAGYYPPLANNSKMQSKYYIINILING
FRGMPSFHMMMNDEQMAAVTQYVVSDLNSYTDTVTAEDVAKLRHANPPGYDPSE

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23646; Mature: 23646

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIIMKITIMKSMTPKMLMIMLLSSSALLGCSQKAGDVETIASKHDAEQTVDYQASRNT
CCEEEEEEEEEHHCCHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCC
GSWGAVYMSRDELKAQPINVVDDSSLPNMENDPIISEWEAKFEGSNAFITTDGKKLYHDS
CCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHEECCCCEEEEECCCEEECCC
CAGCHMHKGEGAYGAGYYPPLANNSKMQSKYYIINILINGFRGMPSFHMMMNDEQMAAVT
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCHHHHHHH
QYVVSDLNSYTDTVTAEDVAKLRHANPPGYDPSE
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNTIIMKITIMKSMTPKMLMIMLLSSSALLGCSQKAGDVETIASKHDAEQTVDYQASRNT
CCEEEEEEEEEHHCCHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCC
GSWGAVYMSRDELKAQPINVVDDSSLPNMENDPIISEWEAKFEGSNAFITTDGKKLYHDS
CCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHEECCCCEEEEECCCEEECCC
CAGCHMHKGEGAYGAGYYPPLANNSKMQSKYYIINILINGFRGMPSFHMMMNDEQMAAVT
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCHHHHHHH
QYVVSDLNSYTDTVTAEDVAKLRHANPPGYDPSE
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA