Click here to switch to the map view.

The map label for this gene is adhB [H]

Identifier: 93005958

GI number: 93005958

Start: 1363981

End: 1365435

Strand: Direct

Name: adhB [H]

Synonym: Pcryo_1130

Alternate gene names: 93005958

Gene position: 1363981-1365435 (Clockwise)

Preceding gene: 93005957

Following gene: 93005959

Centisome position: 44.58

GC content: 47.01

Gene sequence:

>1455_bases
ATGAAGCGATTTTCTATGATGTTATCGATGCTTGCCATTGGTATGGCCTCCAGCGCTGCGATGGCTGAGGATACGAGCCT
TACTAATACAAGCTTACCTAATGCGACCCTACCTAATATCAGTCCTGCCAATAGCGTGCTCGTCAATCGAGGTGCCTATA
TTGCTCGTGCAGCGGACTGTATGGCGTGTCATGGCGAAGACTATACTGGCGGTACAGCAATAGAGACCCCTATGGGGGAG
ATTTATTCTACGAATATCACCCCCTCCAAACGCTATGGTATCGGCAATTATACTGAAAACGATCTAAAAAATGTACTACA
AAAAGGTCGTGCGCCTAGCCATATGCTATATCCTGCTATGCCATATCCTTCTTATAGTGGTATGAAAGAAGAGGATATCA
ACGCGCTGTTTGCCTATCTGCAAACCGTTCCAGTAGTAGATGAAGCGCCAAAGCATAAAACTGACCTACCATTTCCTTTC
AATATTCGTGCGCTAATGCTCGGTTGGAACTTTTTAAATGTTCCTTCTACCCAAGGACGTGATGGCCTCAATGAGACGCA
GAAGCGCGGTGAGTATCTGGTCAATAATCTAGAACACTGTGGTACTTGCCATACGCCACGCAACAGCACTATGGGCTTCG
ATAAAAAAATGTATTTATCTGGAGCGCAGTTAGGGCATTGGTATGCACCTAATATCACCCCTGACGAGTCAAGTGGTATT
GGCAGCTGGAGTGAGCAAGATATCATTACTTATCTACGCACCGGCGAGCTTGATCAGCGCGCTTATGCTGGTGGTCCAAT
GGGTGAGGCAGTCGCGCATAGTACTCAATATCTAAAGCAAGAAGACCTAAGCGCGATTGCCTCTTATCTAAAAGCAGTAC
CTGCCATTCAAACCGATGATAAGGTATCTGCCATCGATGTCTCACGTTTGCCAACCCGTGTAAACGAATCTATCACCCAT
GATTTACTTGCCCAAAAAGATTATTTGGCTCAAGCCAAAACTGCTGTTAGTAAGGGCAGTAATTCACCAGAAGCCTTGTA
TTTGGCGACATGCGGTAGCTGTCATGGTGTGGACGGCTATGGTCAACCTGATGCACAGTATTCACCCATCGTAGGATTAA
GCAGTCTGCGCCGTGATAAGCCTGATGTGCTCGTCAATATGATTTTGCATGGGGTCGTTGGCAGCACCAATACCTCACCG
ATTATGCCGGCCTTCTCTGATGAGCTGAGCAGCGAGCAAATTGCCAGTATCGCCAATTACGTACGCATCAGCTTTGGCGG
TCTTGCCAGCAGCGATGTGAGTGCAGCCGATATCGAGCGCATCGCTGCCACTAGCGCCGAAAAGCCATTTTTAATTAAAT
ACGCAGGCTTGCTGGCGATATTGGGTATTATCGTCGCCATTGCTGTCATTATATTTATTATTCGAGCCATCATACGCTCT
AAGCACCGTCACTGA

Upstream 100 bases:

>100_bases
CTGATAATAGCAAAAAATAATGATAAAAATTCAGCTTAACAGTGGATGTTATGCGCAACAATCATAAAAATATATGAGAT
GTTAGCGAAATGAGGGAATT

Downstream 100 bases:

>100_bases
TTTGGGTTTCATTTCACCTTTCATCAAACAGCGTAGTAATAAATACTATAAAGCTATGTTAGATACTGATTATAAGACAA
GGATTATGGCAATTAGATAG

Product: putative cytochrome c alcohol dehydrogenase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKRFSMMLSMLAIGMASSAAMAEDTSLTNTSLPNATLPNISPANSVLVNRGAYIARAADCMACHGEDYTGGTAIETPMGE
IYSTNITPSKRYGIGNYTENDLKNVLQKGRAPSHMLYPAMPYPSYSGMKEEDINALFAYLQTVPVVDEAPKHKTDLPFPF
NIRALMLGWNFLNVPSTQGRDGLNETQKRGEYLVNNLEHCGTCHTPRNSTMGFDKKMYLSGAQLGHWYAPNITPDESSGI
GSWSEQDIITYLRTGELDQRAYAGGPMGEAVAHSTQYLKQEDLSAIASYLKAVPAIQTDDKVSAIDVSRLPTRVNESITH
DLLAQKDYLAQAKTAVSKGSNSPEALYLATCGSCHGVDGYGQPDAQYSPIVGLSSLRRDKPDVLVNMILHGVVGSTNTSP
IMPAFSDELSSEQIASIANYVRISFGGLASSDVSAADIERIAATSAEKPFLIKYAGLLAILGIIVAIAVIIFIIRAIIRS
KHRH

Sequences:

>Translated_484_residues
MKRFSMMLSMLAIGMASSAAMAEDTSLTNTSLPNATLPNISPANSVLVNRGAYIARAADCMACHGEDYTGGTAIETPMGE
IYSTNITPSKRYGIGNYTENDLKNVLQKGRAPSHMLYPAMPYPSYSGMKEEDINALFAYLQTVPVVDEAPKHKTDLPFPF
NIRALMLGWNFLNVPSTQGRDGLNETQKRGEYLVNNLEHCGTCHTPRNSTMGFDKKMYLSGAQLGHWYAPNITPDESSGI
GSWSEQDIITYLRTGELDQRAYAGGPMGEAVAHSTQYLKQEDLSAIASYLKAVPAIQTDDKVSAIDVSRLPTRVNESITH
DLLAQKDYLAQAKTAVSKGSNSPEALYLATCGSCHGVDGYGQPDAQYSPIVGLSSLRRDKPDVLVNMILHGVVGSTNTSP
IMPAFSDELSSEQIASIANYVRISFGGLASSDVSAADIERIAATSAEKPFLIKYAGLLAILGIIVAIAVIIFIIRAIIRS
KHRH
>Mature_484_residues
MKRFSMMLSMLAIGMASSAAMAEDTSLTNTSLPNATLPNISPANSVLVNRGAYIARAADCMACHGEDYTGGTAIETPMGE
IYSTNITPSKRYGIGNYTENDLKNVLQKGRAPSHMLYPAMPYPSYSGMKEEDINALFAYLQTVPVVDEAPKHKTDLPFPF
NIRALMLGWNFLNVPSTQGRDGLNETQKRGEYLVNNLEHCGTCHTPRNSTMGFDKKMYLSGAQLGHWYAPNITPDESSGI
GSWSEQDIITYLRTGELDQRAYAGGPMGEAVAHSTQYLKQEDLSAIASYLKAVPAIQTDDKVSAIDVSRLPTRVNESITH
DLLAQKDYLAQAKTAVSKGSNSPEALYLATCGSCHGVDGYGQPDAQYSPIVGLSSLRRDKPDVLVNMILHGVVGSTNTSP
IMPAFSDELSSEQIASIANYVRISFGGLASSDVSAADIERIAATSAEKPFLIKYAGLLAILGIIVAIAVIIFIIRAIIRS
KHRH

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 52329; Mature: 52329

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFSMMLSMLAIGMASSAAMAEDTSLTNTSLPNATLPNISPANSVLVNRGAYIARAADC
CHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHHH
MACHGEDYTGGTAIETPMGEIYSTNITPSKRYGIGNYTENDLKNVLQKGRAPSHMLYPAM
HHCCCCCCCCCCEECCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCC
PYPSYSGMKEEDINALFAYLQTVPVVDEAPKHKTDLPFPFNIRALMLGWNFLNVPSTQGR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCC
DGLNETQKRGEYLVNNLEHCGTCHTPRNSTMGFDKKMYLSGAQLGHWYAPNITPDESSGI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCEECCCCCCCCCCCC
GSWSEQDIITYLRTGELDQRAYAGGPMGEAVAHSTQYLKQEDLSAIASYLKAVPAIQTDD
CCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KVSAIDVSRLPTRVNESITHDLLAQKDYLAQAKTAVSKGSNSPEALYLATCGSCHGVDGY
CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
GQPDAQYSPIVGLSSLRRDKPDVLVNMILHGVVGSTNTSPIMPAFSDELSSEQIASIANY
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VRISFGGLASSDVSAADIERIAATSAEKPFLIKYAGLLAILGIIVAIAVIIFIIRAIIRS
HHHEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHRH
CCCC
>Mature Secondary Structure
MKRFSMMLSMLAIGMASSAAMAEDTSLTNTSLPNATLPNISPANSVLVNRGAYIARAADC
CHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEECCCHHHHHHHH
MACHGEDYTGGTAIETPMGEIYSTNITPSKRYGIGNYTENDLKNVLQKGRAPSHMLYPAM
HHCCCCCCCCCCEECCCCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCC
PYPSYSGMKEEDINALFAYLQTVPVVDEAPKHKTDLPFPFNIRALMLGWNFLNVPSTQGR
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCC
DGLNETQKRGEYLVNNLEHCGTCHTPRNSTMGFDKKMYLSGAQLGHWYAPNITPDESSGI
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCEECCCCCCCCCCCC
GSWSEQDIITYLRTGELDQRAYAGGPMGEAVAHSTQYLKQEDLSAIASYLKAVPAIQTDD
CCCCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KVSAIDVSRLPTRVNESITHDLLAQKDYLAQAKTAVSKGSNSPEALYLATCGSCHGVDGY
CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
GQPDAQYSPIVGLSSLRRDKPDVLVNMILHGVVGSTNTSPIMPAFSDELSSEQIASIANY
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VRISFGGLASSDVSAADIERIAATSAEKPFLIKYAGLLAILGIIVAIAVIIFIIRAIIRS
HHHEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHRH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA