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The map label for this gene is yfjD [C]

Identifier: 93005938

GI number: 93005938

Start: 1336024

End: 1337298

Strand: Direct

Name: yfjD [C]

Synonym: Pcryo_1110

Alternate gene names: 93005938

Gene position: 1336024-1337298 (Clockwise)

Preceding gene: 93005931

Following gene: 93005939

Centisome position: 43.66

GC content: 44.0

Gene sequence:

>1275_bases
ATGTCTGTACCTCGTTTACATCGTTCGCGTGCTTGTCGTAAAGACGCCTCTGCCAAACCTCCCCCGACGATGCGCGGCGA
TACTCGCTTGAGTATCAAATCATTGTTGGTATTATTCGGGATAACGTTACTGCCGCAAACGGTTTGGGCGGCTGAAGCTT
TGGCAGACCCAAGTGCCAGTAGCATACTACTGCTCATCTTATTTGTGGTAGTAGCGATTGGTATCTCATTTATCTGTTCG
TTGGCAGAGGCTGCATTGCTCAGTATGACCCCGTCATATATTGCTGACATTCAAGAAACCAATCCAAAAAAAGCAAATAT
GCTAAAAAGCTTAAAGGTTGATAATATCGATCAGTCTTTGGCAGCTATCTTGACGCTAAATACAGTGGCGCATACCTTAG
GCTCTATCGGTGCTGGTGCGCAGGCAACGATTGTATTTGGTAGTGCCTGGTTTGGTCTGTTTTCTGCAATCATGACATTG
GCGATTTTGTTTTTGTCGGAAATCATGCCAAAAACGCTCGGAACAATATACTGGCGACAACTAGGTGGCGTTGTTGCTTA
TTTTGTCCGCGGTATTATATTGCTGCTGTATCCACTTATTTGGATATCAGAGAAGTTCACCAAGCTGCTTGTACGCGGTA
AAGAGCCGCAGGCGTTTAGCCGTCGTGAGTTTGCCGCGCTTGCCAGTATTGGTGAAGAAGCAGGACAGATCGACCCATTA
GAGTCACGTATCATCCGTAACCTATTGGCATTTGGCGCTATTAAAGTCGAAGATATAATGACACCGCGTTCAGTGATGCT
GGCGTTTGAAGAAAATAAAACCGTTGCAGAATTATTGGTTGATCGCCCAAAGCTGACATTCTCAAGATTGCCAATTTATG
ATGGCGATTTGGACAATATTACAGGTTTTGTGTTGAAGACGGACATGCTATTAGCAAAGGTGAATCATGCTGTCGATAGA
CCATTGACGCAGTTTAAACGAGATATCACTTTTGTATTCTCAAAAATGAAGTTATTTGATCTACTAGAGCTGATGCTCAA
AAACCGTATCCATATTGCTATTACGGTTGGTGAGTATGGCGAAGTCAAAGGTTTAGTTACTCTAGAAGATGTGTTCGAAA
CTCTCTTAGGTCTTGAGATTGTCGATGAGATAGATCGCGTTGAAGACATGCAAGCATTGGCACGGCAAATGATGGACAGA
CGTGTCGAGCGCTTGGGTATGAAGCTAAGTGATGATGAGCATTACGAAGACTATACGGCTGACAGTAAGCAGTAA

Upstream 100 bases:

>100_bases
CATATCAGATAATATTTTCTATCTGCTTGCCTCTGCTCATGATATATTGTGACTTCCTTTTACTTCTTTGTTTAGGTTAC
CTAACTTGTTCACCTCTTTT

Downstream 100 bases:

>100_bases
AAACTTAATCAGTTTTTATTGCGTAAACTACTGATAATTTATCGTATGCTTTTTATAAAATAGCTCATTTATTCAAAAAG
CATACTTTACTGAAGTAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSVPRLHRSRACRKDASAKPPPTMRGDTRLSIKSLLVLFGITLLPQTVWAAEALADPSASSILLLILFVVVAIGISFICS
LAEAALLSMTPSYIADIQETNPKKANMLKSLKVDNIDQSLAAILTLNTVAHTLGSIGAGAQATIVFGSAWFGLFSAIMTL
AILFLSEIMPKTLGTIYWRQLGGVVAYFVRGIILLLYPLIWISEKFTKLLVRGKEPQAFSRREFAALASIGEEAGQIDPL
ESRIIRNLLAFGAIKVEDIMTPRSVMLAFEENKTVAELLVDRPKLTFSRLPIYDGDLDNITGFVLKTDMLLAKVNHAVDR
PLTQFKRDITFVFSKMKLFDLLELMLKNRIHIAITVGEYGEVKGLVTLEDVFETLLGLEIVDEIDRVEDMQALARQMMDR
RVERLGMKLSDDEHYEDYTADSKQ

Sequences:

>Translated_424_residues
MSVPRLHRSRACRKDASAKPPPTMRGDTRLSIKSLLVLFGITLLPQTVWAAEALADPSASSILLLILFVVVAIGISFICS
LAEAALLSMTPSYIADIQETNPKKANMLKSLKVDNIDQSLAAILTLNTVAHTLGSIGAGAQATIVFGSAWFGLFSAIMTL
AILFLSEIMPKTLGTIYWRQLGGVVAYFVRGIILLLYPLIWISEKFTKLLVRGKEPQAFSRREFAALASIGEEAGQIDPL
ESRIIRNLLAFGAIKVEDIMTPRSVMLAFEENKTVAELLVDRPKLTFSRLPIYDGDLDNITGFVLKTDMLLAKVNHAVDR
PLTQFKRDITFVFSKMKLFDLLELMLKNRIHIAITVGEYGEVKGLVTLEDVFETLLGLEIVDEIDRVEDMQALARQMMDR
RVERLGMKLSDDEHYEDYTADSKQ
>Mature_423_residues
SVPRLHRSRACRKDASAKPPPTMRGDTRLSIKSLLVLFGITLLPQTVWAAEALADPSASSILLLILFVVVAIGISFICSL
AEAALLSMTPSYIADIQETNPKKANMLKSLKVDNIDQSLAAILTLNTVAHTLGSIGAGAQATIVFGSAWFGLFSAIMTLA
ILFLSEIMPKTLGTIYWRQLGGVVAYFVRGIILLLYPLIWISEKFTKLLVRGKEPQAFSRREFAALASIGEEAGQIDPLE
SRIIRNLLAFGAIKVEDIMTPRSVMLAFEENKTVAELLVDRPKLTFSRLPIYDGDLDNITGFVLKTDMLLAKVNHAVDRP
LTQFKRDITFVFSKMKLFDLLELMLKNRIHIAITVGEYGEVKGLVTLEDVFETLLGLEIVDEIDRVEDMQALARQMMDRR
VERLGMKLSDDEHYEDYTADSKQ

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=406, Percent_Identity=26.1083743842365, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI40068053, Length=305, Percent_Identity=23.6065573770492, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI40068055, Length=305, Percent_Identity=23.6065573770492, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI94681046, Length=300, Percent_Identity=24.3333333333333, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI145693175, Length=268, Percent_Identity=23.8805970149254, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786879, Length=163, Percent_Identity=29.4478527607362, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790664, Length=332, Percent_Identity=22.5903614457831, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17539402, Length=281, Percent_Identity=25.9786476868327, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324512, Length=298, Percent_Identity=25.503355704698, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47153; Mature: 47022

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPRLHRSRACRKDASAKPPPTMRGDTRLSIKSLLVLFGITLLPQTVWAAEALADPSAS
CCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SILLLILFVVVAIGISFICSLAEAALLSMTPSYIADIQETNPKKANMLKSLKVDNIDQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH
AAILTLNTVAHTLGSIGAGAQATIVFGSAWFGLFSAIMTLAILFLSEIMPKTLGTIYWRQ
HHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGVVAYFVRGIILLLYPLIWISEKFTKLLVRGKEPQAFSRREFAALASIGEEAGQIDPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
ESRIIRNLLAFGAIKVEDIMTPRSVMLAFEENKTVAELLVDRPKLTFSRLPIYDGDLDNI
HHHHHHHHHHHCCHHHHHHCCCHHHHEEECCCCHHHHHHHCCCCCCHHCCCCCCCCHHHH
TGFVLKTDMLLAKVNHAVDRPLTQFKRDITFVFSKMKLFDLLELMLKNRIHIAITVGEYG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
EVKGLVTLEDVFETLLGLEIVDEIDRVEDMQALARQMMDRRVERLGMKLSDDEHYEDYTA
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DSKQ
CCCC
>Mature Secondary Structure 
SVPRLHRSRACRKDASAKPPPTMRGDTRLSIKSLLVLFGITLLPQTVWAAEALADPSAS
CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SILLLILFVVVAIGISFICSLAEAALLSMTPSYIADIQETNPKKANMLKSLKVDNIDQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH
AAILTLNTVAHTLGSIGAGAQATIVFGSAWFGLFSAIMTLAILFLSEIMPKTLGTIYWRQ
HHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGVVAYFVRGIILLLYPLIWISEKFTKLLVRGKEPQAFSRREFAALASIGEEAGQIDPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
ESRIIRNLLAFGAIKVEDIMTPRSVMLAFEENKTVAELLVDRPKLTFSRLPIYDGDLDNI
HHHHHHHHHHHCCHHHHHHCCCHHHHEEECCCCHHHHHHHCCCCCCHHCCCCCCCCHHHH
TGFVLKTDMLLAKVNHAVDRPLTQFKRDITFVFSKMKLFDLLELMLKNRIHIAITVGEYG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
EVKGLVTLEDVFETLLGLEIVDEIDRVEDMQALARQMMDRRVERLGMKLSDDEHYEDYTA
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DSKQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]