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The map label for this gene is 93005866

Identifier: 93005866

GI number: 93005866

Start: 1239051

End: 1240355

Strand: Reverse

Name: 93005866

Synonym: Pcryo_1038

Alternate gene names: NA

Gene position: 1240355-1239051 (Counterclockwise)

Preceding gene: 93005867

Following gene: 93005865

Centisome position: 40.54

GC content: 45.06

Gene sequence:

>1305_bases
ATGCGCCTGACGAAGCTAAAGGATGCTTTTGTACGCAGTGCAGCTTACGAGCGACGTTTTTTGGTAAAAAATCCGTGGGA
CTTGGCGATGGTGTTCTGGATACCGCTGGCTACTGTGCTGCTGATTTGGTGGATTTTTTCACAAATACAAATCACTGATT
TGCCTATTGGCGTGATTGATAATGATCGGGGGCCTGTTGCCAATACGGCATTACGGTATTTGGAAGCCAATCCTAATTTG
ACGGTAAAGCAGCTATATCATACACCTGCTGCGGCAAAAGCTGCTATCTTGCAGCGTGATATCTATGCAGTCGTCATTAT
CCCTGAAGATTTTTCTCGTAATATCTTATTAAGTAAGCCTGCTCCTATCGTACTCCAAGTCAATGCCCAATATGGCACCC
ACTCTGGCATTATCCAAACCAGCGTACAGTCTGTCATTGGTACCTTATCCGCAGGCGTTGAGATGAAGCGCTTGGTCAAG
CAAGGGATGGCTCCATCACAAGCTGCGATTGCCTACTCTCCTATTAGTATTCAACGTATTAGCTTGTTTAATGCTGCGAC
TGATTATCAGCAATTTTTGGCATCGACAGTCATTCCTGCGCTGCTGCATATTTTGGCAATGGTGATTGGCGCAACGACGA
TCGGCCGTGAATTGCGTGACAAGCGAATCGGACGCTGGTATCACTTTATTAATGGCAGTCATGTTTATTTAACATTACCA
TCTAAAAATGATCAACCTAATAATAACAGCCAACCTAGTCCATTAGATAATGTCTCAGACAGTCAAAACCAAGCACCAGA
AGAAGTAAGTATACCGGTTTTGGTATTTGGTTTATTGGGCAAGTACTTTTGGCCGCTACTGGCTTATAGTATTTGGTCGA
TATTGGCTTTATGGCTGGCAGCGCCGCAACAATCGATTGCTATTAGCGCGCTCATGGTAACCTATATAAGCCTTATATTA
TTAATGATGTTATCTTTCTGGCTTGGCGCTATATTTACCTTAGGCTCCTTCTCATTGCGTATGGGTTTATCGGCGACGGG
TTTTATCTCAGCACCTTCTTATGCGTTCGCTGGGGTGACGTTTCCTTATGTCGCTATCAGTAAGAATGCCCAGCATTGGT
CAGATGTGCTGCCACTCACTCATTATCTTAAGCTGCATATTGCCCAGTTACAGATGCAAGCGCCCGTCCTCATATCCTTA
CCGATTGTTTACGGGCTGACGCTAGCAACACTCGTTACGCTATATTTAACGGCTTTACTAAGCAAACGCGCATTAGCGCA
TCCTGAACGCTGGGGAGCACGCTGA

Upstream 100 bases:

>100_bases
AAAAGCCCGACCGACTAACCCTGATAGACGTATTCGCTCAGGTATGAGCGTAGTTGTACGTCTCAATCCTGCCCTCGTTA
ATCAGAACCAAGAGTAAGCT

Downstream 100 bases:

>100_bases
TGTCATTATCCAAAAACAAGTCCTCTACTATCATGACAGAATCAGAGAAAATTCTGGCATCGCCAAGCTTTTTTGGCAGC
TTTTTACAAACTATAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; Permease Component Of ABC Transporter; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; Daunorubicin Resistance Transmembrane Protein; Conserved Transporter; ABC Transporter Permease; ABC-2 Type Transporter Family; ABC Transporter Transmembrane Protein; ABC-Type Multidrug Transporter Permease Component; ABC Transporter Transmembrane Permease; Multidrug ABC Transporter Permease Component; ABC-2 Type Transport System Permease Protein; Abc-2 Type Transporter; ABC-Type Multidrug Transport System; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MRLTKLKDAFVRSAAYERRFLVKNPWDLAMVFWIPLATVLLIWWIFSQIQITDLPIGVIDNDRGPVANTALRYLEANPNL
TVKQLYHTPAAAKAAILQRDIYAVVIIPEDFSRNILLSKPAPIVLQVNAQYGTHSGIIQTSVQSVIGTLSAGVEMKRLVK
QGMAPSQAAIAYSPISIQRISLFNAATDYQQFLASTVIPALLHILAMVIGATTIGRELRDKRIGRWYHFINGSHVYLTLP
SKNDQPNNNSQPSPLDNVSDSQNQAPEEVSIPVLVFGLLGKYFWPLLAYSIWSILALWLAAPQQSIAISALMVTYISLIL
LMMLSFWLGAIFTLGSFSLRMGLSATGFISAPSYAFAGVTFPYVAISKNAQHWSDVLPLTHYLKLHIAQLQMQAPVLISL
PIVYGLTLATLVTLYLTALLSKRALAHPERWGAR

Sequences:

>Translated_434_residues
MRLTKLKDAFVRSAAYERRFLVKNPWDLAMVFWIPLATVLLIWWIFSQIQITDLPIGVIDNDRGPVANTALRYLEANPNL
TVKQLYHTPAAAKAAILQRDIYAVVIIPEDFSRNILLSKPAPIVLQVNAQYGTHSGIIQTSVQSVIGTLSAGVEMKRLVK
QGMAPSQAAIAYSPISIQRISLFNAATDYQQFLASTVIPALLHILAMVIGATTIGRELRDKRIGRWYHFINGSHVYLTLP
SKNDQPNNNSQPSPLDNVSDSQNQAPEEVSIPVLVFGLLGKYFWPLLAYSIWSILALWLAAPQQSIAISALMVTYISLIL
LMMLSFWLGAIFTLGSFSLRMGLSATGFISAPSYAFAGVTFPYVAISKNAQHWSDVLPLTHYLKLHIAQLQMQAPVLISL
PIVYGLTLATLVTLYLTALLSKRALAHPERWGAR
>Mature_434_residues
MRLTKLKDAFVRSAAYERRFLVKNPWDLAMVFWIPLATVLLIWWIFSQIQITDLPIGVIDNDRGPVANTALRYLEANPNL
TVKQLYHTPAAAKAAILQRDIYAVVIIPEDFSRNILLSKPAPIVLQVNAQYGTHSGIIQTSVQSVIGTLSAGVEMKRLVK
QGMAPSQAAIAYSPISIQRISLFNAATDYQQFLASTVIPALLHILAMVIGATTIGRELRDKRIGRWYHFINGSHVYLTLP
SKNDQPNNNSQPSPLDNVSDSQNQAPEEVSIPVLVFGLLGKYFWPLLAYSIWSILALWLAAPQQSIAISALMVTYISLIL
LMMLSFWLGAIFTLGSFSLRMGLSATGFISAPSYAFAGVTFPYVAISKNAQHWSDVLPLTHYLKLHIAQLQMQAPVLISL
PIVYGLTLATLVTLYLTALLSKRALAHPERWGAR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48065; Mature: 48065

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTKLKDAFVRSAAYERRFLVKNPWDLAMVFWIPLATVLLIWWIFSQIQITDLPIGVID
CCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEEE
NDRGPVANTALRYLEANPNLTVKQLYHTPAAAKAAILQRDIYAVVIIPEDFSRNILLSKP
CCCCCHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEECC
APIVLQVNAQYGTHSGIIQTSVQSVIGTLSAGVEMKRLVKQGMAPSQAAIAYSPISIQRI
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCEEEHH
SLFNAATDYQQFLASTVIPALLHILAMVIGATTIGRELRDKRIGRWYHFINGSHVYLTLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECC
SKNDQPNNNSQPSPLDNVSDSQNQAPEEVSIPVLVFGLLGKYFWPLLAYSIWSILALWLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APQQSIAISALMVTYISLILLMMLSFWLGAIFTLGSFSLRMGLSATGFISAPSYAFAGVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC
FPYVAISKNAQHWSDVLPLTHYLKLHIAQLQMQAPVLISLPIVYGLTLATLVTLYLTALL
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH
SKRALAHPERWGAR
HHHHHCCCHHCCCC
>Mature Secondary Structure
MRLTKLKDAFVRSAAYERRFLVKNPWDLAMVFWIPLATVLLIWWIFSQIQITDLPIGVID
CCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCEEEEE
NDRGPVANTALRYLEANPNLTVKQLYHTPAAAKAAILQRDIYAVVIIPEDFSRNILLSKP
CCCCCHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEECC
APIVLQVNAQYGTHSGIIQTSVQSVIGTLSAGVEMKRLVKQGMAPSQAAIAYSPISIQRI
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCEEEHH
SLFNAATDYQQFLASTVIPALLHILAMVIGATTIGRELRDKRIGRWYHFINGSHVYLTLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECC
SKNDQPNNNSQPSPLDNVSDSQNQAPEEVSIPVLVFGLLGKYFWPLLAYSIWSILALWLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APQQSIAISALMVTYISLILLMMLSFWLGAIFTLGSFSLRMGLSATGFISAPSYAFAGVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC
FPYVAISKNAQHWSDVLPLTHYLKLHIAQLQMQAPVLISLPIVYGLTLATLVTLYLTALL
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH
SKRALAHPERWGAR
HHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA