Click here to switch to the map view.

The map label for this gene is 93005865

Identifier: 93005865

GI number: 93005865

Start: 1237858

End: 1239051

Strand: Reverse

Name: 93005865

Synonym: Pcryo_1037

Alternate gene names: NA

Gene position: 1239051-1237858 (Counterclockwise)

Preceding gene: 93005866

Following gene: 93005862

Centisome position: 40.49

GC content: 43.47

Gene sequence:

>1194_bases
ATGTCATTATCCAAAAACAAGTCCTCTACTATCATGACAGAATCAGAGAAAATTCTGGCATCGCCAAGCTTTTTTGGCAG
CTTTTTACAAACTATAAAAGACGTGTTTTCTGATAAAGGTGTGCTGTTACTATTGATGATTGCACCGATTATTTATGGTT
TTTTCTATCCTTGGCCGTATTCTACGGAAGTTGTAAACCACGTACCTGTTGGCATTGTTGATAAAGACAATAGTCCTTTA
TCGCAAACCATCGTTCGTTATGCCAGTGCCAGTCCGCAATTAGATACAAAACGCTTCTTAAATGAACAGCAAGCCATCGA
TGCCATGTGGGCGGATGACATCGCAGGCTACATGATTATTCCAAGCGGACTTGAACAGCAAGTGTTGTCAGGCAAAGCCG
CTAGCGTCAGCGTACTTGGTAATGGCGGCTATTTTTTATTAAATAAAAACGTACAAATGGGATTTTTGCAAGCGGTTAGT
ACCGTCTCAGCTGGCATTGAGGTAAAGAAAAACGTGGCACAAGGGGCGTACTTAGCGACTGCTTCTGCCAAAACCCAAGC
CGTACCGTTAAAGATTATCCCTTTATATAATCAAACGGAAGGTTATGGCGCTTACGTCGTGCCAGCGGTGTCTATTCTTA
TCTTGCAGCAAACGCTTTTAATGTCAACGGCGATGTTAATCGGCACTTGGTATGAGCAACGACGCCATAGAACTAATATT
CGTGGCTGGCTTGGGCGGATTGCAGCGCTAAGTATGTTTAGCTTTGTGATTGGCTGTTTTTATTACGGCTGGGCATTTGA
GCTTCATGACTATCCGCGCGGGCAAAACATGCTCGGCAGTTTATTATTCTTGCTGCTATTTTGTCCGACAGTCGCCACAC
TTGGTTGCGTGCTTGGACTTTGGTTTCGCCAGCGCGAGCGTAGTATGCAAATTTTAATTTTTAGCTCATTACCGATGTTT
TTTGTCAGTGGCTATCCGTGGCCTGCCCATCAGCTTCCTGAATTCTTGCAAATTATTCGTTGGTTATTGCCAACGACACC
AGGTATCAATACTTCCGTGCAGCTTAACCAAATGGGCGCTAGTATCGCGCAAGTAGCGACAGGATTTTATGCGTTGGCAG
GATTGTGGATTTTTTACTTTATTCTACTGTTGCTATTCCGCTGGTTAACGTCAGAACGTAAAAATGCTTATTAA

Upstream 100 bases:

>100_bases
TTGTTTACGGGCTGACGCTAGCAACACTCGTTACGCTATATTTAACGGCTTTACTAAGCAAACGCGCATTAGCGCATCCT
GAACGCTGGGGAGCACGCTG

Downstream 100 bases:

>100_bases
AGTTAATAACATATTAACCATATTAACCATGATAAAAAAAGCGCCTGTATAATTACAGACGCTTTTTTATTGACTCAGTT
TAATATCATTAATCGTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transport System Permease Protein; ABC-Type Multidrug Transport System Protein; Permease Component Of ABC Transporter; Conserved Transporter; ABC Transporter Permease; ABC Transporter Transmembrane Protein; Multidrug ABC Transporter Permease Component; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; Daunorubicin Resistance Transmembrane Protein; ABC-2 Type Transporter Domain Protein; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Family; Integral Membrane Protein; Abc Transporter; Abc-2 Type Transporter; ABC-Type Multidrug Transport System; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSLSKNKSSTIMTESEKILASPSFFGSFLQTIKDVFSDKGVLLLLMIAPIIYGFFYPWPYSTEVVNHVPVGIVDKDNSPL
SQTIVRYASASPQLDTKRFLNEQQAIDAMWADDIAGYMIIPSGLEQQVLSGKAASVSVLGNGGYFLLNKNVQMGFLQAVS
TVSAGIEVKKNVAQGAYLATASAKTQAVPLKIIPLYNQTEGYGAYVVPAVSILILQQTLLMSTAMLIGTWYEQRRHRTNI
RGWLGRIAALSMFSFVIGCFYYGWAFELHDYPRGQNMLGSLLFLLLFCPTVATLGCVLGLWFRQRERSMQILIFSSLPMF
FVSGYPWPAHQLPEFLQIIRWLLPTTPGINTSVQLNQMGASIAQVATGFYALAGLWIFYFILLLLFRWLTSERKNAY

Sequences:

>Translated_397_residues
MSLSKNKSSTIMTESEKILASPSFFGSFLQTIKDVFSDKGVLLLLMIAPIIYGFFYPWPYSTEVVNHVPVGIVDKDNSPL
SQTIVRYASASPQLDTKRFLNEQQAIDAMWADDIAGYMIIPSGLEQQVLSGKAASVSVLGNGGYFLLNKNVQMGFLQAVS
TVSAGIEVKKNVAQGAYLATASAKTQAVPLKIIPLYNQTEGYGAYVVPAVSILILQQTLLMSTAMLIGTWYEQRRHRTNI
RGWLGRIAALSMFSFVIGCFYYGWAFELHDYPRGQNMLGSLLFLLLFCPTVATLGCVLGLWFRQRERSMQILIFSSLPMF
FVSGYPWPAHQLPEFLQIIRWLLPTTPGINTSVQLNQMGASIAQVATGFYALAGLWIFYFILLLLFRWLTSERKNAY
>Mature_396_residues
SLSKNKSSTIMTESEKILASPSFFGSFLQTIKDVFSDKGVLLLLMIAPIIYGFFYPWPYSTEVVNHVPVGIVDKDNSPLS
QTIVRYASASPQLDTKRFLNEQQAIDAMWADDIAGYMIIPSGLEQQVLSGKAASVSVLGNGGYFLLNKNVQMGFLQAVST
VSAGIEVKKNVAQGAYLATASAKTQAVPLKIIPLYNQTEGYGAYVVPAVSILILQQTLLMSTAMLIGTWYEQRRHRTNIR
GWLGRIAALSMFSFVIGCFYYGWAFELHDYPRGQNMLGSLLFLLLFCPTVATLGCVLGLWFRQRERSMQILIFSSLPMFF
VSGYPWPAHQLPEFLQIIRWLLPTTPGINTSVQLNQMGASIAQVATGFYALAGLWIFYFILLLLFRWLTSERKNAY

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44312; Mature: 44181

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSKNKSSTIMTESEKILASPSFFGSFLQTIKDVFSDKGVLLLLMIAPIIYGFFYPWPY
CCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
STEVVNHVPVGIVDKDNSPLSQTIVRYASASPQLDTKRFLNEQQAIDAMWADDIAGYMII
CHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
PSGLEQQVLSGKAASVSVLGNGGYFLLNKNVQMGFLQAVSTVSAGIEVKKNVAQGAYLAT
CCCHHHHHHCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCEEEE
ASAKTQAVPLKIIPLYNQTEGYGAYVVPAVSILILQQTLLMSTAMLIGTWYEQRRHRTNI
CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGWLGRIAALSMFSFVIGCFYYGWAFELHDYPRGQNMLGSLLFLLLFCPTVATLGCVLGL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFRQRERSMQILIFSSLPMFFVSGYPWPAHQLPEFLQIIRWLLPTTPGINTSVQLNQMGA
HHHHHHCCEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
SIAQVATGFYALAGLWIFYFILLLLFRWLTSERKNAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLSKNKSSTIMTESEKILASPSFFGSFLQTIKDVFSDKGVLLLLMIAPIIYGFFYPWPY
CCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
STEVVNHVPVGIVDKDNSPLSQTIVRYASASPQLDTKRFLNEQQAIDAMWADDIAGYMII
CHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
PSGLEQQVLSGKAASVSVLGNGGYFLLNKNVQMGFLQAVSTVSAGIEVKKNVAQGAYLAT
CCCHHHHHHCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCEEEE
ASAKTQAVPLKIIPLYNQTEGYGAYVVPAVSILILQQTLLMSTAMLIGTWYEQRRHRTNI
CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGWLGRIAALSMFSFVIGCFYYGWAFELHDYPRGQNMLGSLLFLLLFCPTVATLGCVLGL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFRQRERSMQILIFSSLPMFFVSGYPWPAHQLPEFLQIIRWLLPTTPGINTSVQLNQMGA
HHHHHHCCEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
SIAQVATGFYALAGLWIFYFILLLLFRWLTSERKNAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA