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The map label for this gene is dsdX [C]

Identifier: 93005853

GI number: 93005853

Start: 1225037

End: 1226395

Strand: Reverse

Name: dsdX [C]

Synonym: Pcryo_1025

Alternate gene names: 93005853

Gene position: 1226395-1225037 (Counterclockwise)

Preceding gene: 93005857

Following gene: 93005852

Centisome position: 40.08

GC content: 43.86

Gene sequence:

>1359_bases
ATGATCGTATTTTGGCTGGTACTGACCATTCTTTTTATTATTTTTGCCACCGCAAAACTCAAGTGGCATCCTTTTTTAGT
ATTAATCTTATCTGCCTTTTTGGTCGCACTATTTTACCAAGTACCGCTTAATACGGTCGCTAAAACCATCTCTGATGGCT
TTGGGGGCATCTTAGGATATATCGGTCTGGTCATTGTATTTGGTACTATTATCGGCTTAATACTTGAGAAAACGGGTGCC
GCCATTGTGATGGCAGAAACGGTCATTAAAGTCTTGGGACCACGCTTCCCTACTTTGACGATGTCTATTGTAGGTGCCGT
AGTATCTGTACCAGTGTTTTGCGATTCAGGCTATATTATTTTAAACTCGTTAAAAGAGTCTTTGGCTGAGCGCTTAAAAG
TATCAAGCGTGGCGATGAGTATTGCCTTAGCAACTGGCTTATATGCGACTCATACCTTTGTACCGCCAACACCAGGTCCA
ATTGCAGCAGCAGGAAACTTGGGACTTGAGTCAAATTTGGGCTTGGTCATCATGGTTGGGGTCGTTGTGACAACTGTTGC
CGTACTTGCCGGTTGGTTATGGTCCAATCGCTTCCTGAATGCCACTCCTGACAATATTGATGCAATCGAAGCGCCAGCTG
CGACTGTGCCAAATAACATGAAAACTCGCGACGACTATAGTAAGCTACCGTCGGCAACCATGGCATTTTTACCTATTATC
GTGCCTATCGTCTTGATTTGCTTATCGTCTGTTGCTAACTTACCTAGTACGCCATTTGGTACAAGTACCATAACAGATAT
CTTGATATTTATTGGCAATCCATTGACAGCCCTACTGATTGGTTTGTTTTTATCATTTTTACTCATCAATACTGAACAAA
AAACGCAGCAAATCAGCGATAGCATCTCTCAAGGCTTGGTGGTCGCAGCGCCTATTCTCTTAATCACTGGTGCTGGCGGC
GCGTTTGGCGCTATGCTAAAGGTCACACCAATTGGCGATTATTTGGGTACGACTTTATCTGCCTTGGGGCTTGGTATTTT
TATGCCATTTATCGTTTCTGCTGCACTAAAAACAGCACAAGGCTCAACTACTGTTGCCTTGGTGACCACCTCTGCGATGG
TCGCACCACTATTGGGTCAAATAGGTCTCGATAGTGAGCTTGGTCGCGTATTTTGTGTGATGGCAATTGGTGCAGGCGCG
ATGACTATCTCGCACGCTAATGACAGCTTTTTTTGGATTGTTAGCCAGTTTAGTCGTATGAGTGTGGCACAGGCTTATAA
AGCCCATTCTATGGCGACTGGTATTCAGGGCGTGACCAGTATCATCTTTATTTGGTTATTAACCTTGGTATTTATTTAA

Upstream 100 bases:

>100_bases
CCCCTTTAAAAATTCATATGACTATTGATGCTTTATGAAGTGCACGCTGCATGAGCCTCATAATTTGTCATAAGACATTA
ACAACTATATAGAGACAGTG

Downstream 100 bases:

>100_bases
AGAGATTCAAAGAGACATTCATGAAAATTTTAATTGCTCCCGACTCATTTAAAGAAAGCTTAGAAGCACTGGATGTTTGC
CGCGCCATTCAATCTGGCTT

Product: gluconate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MIVFWLVLTILFIIFATAKLKWHPFLVLILSAFLVALFYQVPLNTVAKTISDGFGGILGYIGLVIVFGTIIGLILEKTGA
AIVMAETVIKVLGPRFPTLTMSIVGAVVSVPVFCDSGYIILNSLKESLAERLKVSSVAMSIALATGLYATHTFVPPTPGP
IAAAGNLGLESNLGLVIMVGVVVTTVAVLAGWLWSNRFLNATPDNIDAIEAPAATVPNNMKTRDDYSKLPSATMAFLPII
VPIVLICLSSVANLPSTPFGTSTITDILIFIGNPLTALLIGLFLSFLLINTEQKTQQISDSISQGLVVAAPILLITGAGG
AFGAMLKVTPIGDYLGTTLSALGLGIFMPFIVSAALKTAQGSTTVALVTTSAMVAPLLGQIGLDSELGRVFCVMAIGAGA
MTISHANDSFFWIVSQFSRMSVAQAYKAHSMATGIQGVTSIIFIWLLTLVFI

Sequences:

>Translated_452_residues
MIVFWLVLTILFIIFATAKLKWHPFLVLILSAFLVALFYQVPLNTVAKTISDGFGGILGYIGLVIVFGTIIGLILEKTGA
AIVMAETVIKVLGPRFPTLTMSIVGAVVSVPVFCDSGYIILNSLKESLAERLKVSSVAMSIALATGLYATHTFVPPTPGP
IAAAGNLGLESNLGLVIMVGVVVTTVAVLAGWLWSNRFLNATPDNIDAIEAPAATVPNNMKTRDDYSKLPSATMAFLPII
VPIVLICLSSVANLPSTPFGTSTITDILIFIGNPLTALLIGLFLSFLLINTEQKTQQISDSISQGLVVAAPILLITGAGG
AFGAMLKVTPIGDYLGTTLSALGLGIFMPFIVSAALKTAQGSTTVALVTTSAMVAPLLGQIGLDSELGRVFCVMAIGAGA
MTISHANDSFFWIVSQFSRMSVAQAYKAHSMATGIQGVTSIIFIWLLTLVFI
>Mature_452_residues
MIVFWLVLTILFIIFATAKLKWHPFLVLILSAFLVALFYQVPLNTVAKTISDGFGGILGYIGLVIVFGTIIGLILEKTGA
AIVMAETVIKVLGPRFPTLTMSIVGAVVSVPVFCDSGYIILNSLKESLAERLKVSSVAMSIALATGLYATHTFVPPTPGP
IAAAGNLGLESNLGLVIMVGVVVTTVAVLAGWLWSNRFLNATPDNIDAIEAPAATVPNNMKTRDDYSKLPSATMAFLPII
VPIVLICLSSVANLPSTPFGTSTITDILIFIGNPLTALLIGLFLSFLLINTEQKTQQISDSISQGLVVAAPILLITGAGG
AFGAMLKVTPIGDYLGTTLSALGLGIFMPFIVSAALKTAQGSTTVALVTTSAMVAPLLGQIGLDSELGRVFCVMAIGAGA
MTISHANDSFFWIVSQFSRMSVAQAYKAHSMATGIQGVTSIIFIWLLTLVFI

Specific function: Probable Permease For An Unknown Substrate. [C]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=454, Percent_Identity=31.9383259911894, Blast_Score=184, Evalue=7e-48,
Organism=Escherichia coli, GI1789097, Length=447, Percent_Identity=30.4250559284116, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI48994935, Length=438, Percent_Identity=26.9406392694064, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI1790716, Length=420, Percent_Identity=29.5238095238095, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790776, Length=465, Percent_Identity=26.4516129032258, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI48994939, Length=442, Percent_Identity=28.5067873303167, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI2367370, Length=435, Percent_Identity=26.8965517241379, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 47457; Mature: 47457

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]