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The map label for this gene is yedU [C]

Identifier: 93005839

GI number: 93005839

Start: 1209960

End: 1210637

Strand: Reverse

Name: yedU [C]

Synonym: Pcryo_1011

Alternate gene names: 93005839

Gene position: 1210637-1209960 (Counterclockwise)

Preceding gene: 93005840

Following gene: 93005838

Centisome position: 39.56

GC content: 43.07

Gene sequence:

>678_bases
ATGAATATTTTAATGGTACTAACTTCACACGATAAATTGGGCGATACTGGTAAGAAGACTGGCTTTTGGCTAGAAGAATT
TGCCGCGCCTTACTATGCTTTTTTAGATGCCGGTGTCAATATCACGATTGCCTCTCCTGCAGGCGGTCAACCACCACTTG
ACCCAAGTAGTGACACGCCGGATGCTCAAACCAAAGATACCAAACGTTTTAAAGAAGATTCTGAAGCCCAAGAACGCCTA
GCAACGACTAAAAAATTGGCAGATATGAAAGCGGAAGATTTTGATTCAGTATTCTATCCTGGTGGTCATGGTCCAATGTG
GGATTTAGCCGTTGATAAAAACTCGATTGAATTAATTGAGACGTTTATCAAACAAGATAAGCCCGTTGCTTTTGTCTGCC
ATTCTCCTGCCGCGCTCAAAAACGTTAAAATCGATGGCGAGTATCTGGTCAAAGGCAAAACGGTCACAGGCTTTAGTAAT
ACTGAAGAAGAAGCGGTTCAACTCACTGACGTCGTGCCTTTCTTATTAGAAGATGTGCTAAAAGCCAATGGCGGAAACTA
TGAAAAAAGCTCTGATTGGGAATCGTTTGTGGTCGAAGATGGTTTGCTGATCACGGGTCAAAATCCAGCGTCGTCAGAAG
AAGCCGCCAAGCGTTTAATGGCTAAAATACAGGCTTAA

Upstream 100 bases:

>100_bases
TTTTTAGCGTTAATAATTTTCAATACCGACTGCAACACAGTACTGATAGGCTTTAATAATAAACCTCAATAATAACTTTC
AACAATAAACAGGGACAATT

Downstream 100 bases:

>100_bases
TAGCATCAAATCCACTGCAAAAAGGCTAACTAAATGATTCGCTTACATCACCTCAATCAATCACGCTCATTACGGACGTT
ATGGCTTTTAGAAGAATTGG

Product: ThiJ/PfpI

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; C56 Family Peptidase; DJ-1/PfpI/ThiJ Superfamily Protein; Transcriptional Regulator; Amidotransferase; PFPI-Like Cystiene Protease; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Fis Family Transcriptional Regulator; DJ-1/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MNILMVLTSHDKLGDTGKKTGFWLEEFAAPYYAFLDAGVNITIASPAGGQPPLDPSSDTPDAQTKDTKRFKEDSEAQERL
ATTKKLADMKAEDFDSVFYPGGHGPMWDLAVDKNSIELIETFIKQDKPVAFVCHSPAALKNVKIDGEYLVKGKTVTGFSN
TEEEAVQLTDVVPFLLEDVLKANGGNYEKSSDWESFVVEDGLLITGQNPASSEEAAKRLMAKIQA

Sequences:

>Translated_225_residues
MNILMVLTSHDKLGDTGKKTGFWLEEFAAPYYAFLDAGVNITIASPAGGQPPLDPSSDTPDAQTKDTKRFKEDSEAQERL
ATTKKLADMKAEDFDSVFYPGGHGPMWDLAVDKNSIELIETFIKQDKPVAFVCHSPAALKNVKIDGEYLVKGKTVTGFSN
TEEEAVQLTDVVPFLLEDVLKANGGNYEKSSDWESFVVEDGLLITGQNPASSEEAAKRLMAKIQA
>Mature_225_residues
MNILMVLTSHDKLGDTGKKTGFWLEEFAAPYYAFLDAGVNITIASPAGGQPPLDPSSDTPDAQTKDTKRFKEDSEAQERL
ATTKKLADMKAEDFDSVFYPGGHGPMWDLAVDKNSIELIETFIKQDKPVAFVCHSPAALKNVKIDGEYLVKGKTVTGFSN
TEEEAVQLTDVVPFLLEDVLKANGGNYEKSSDWESFVVEDGLLITGQNPASSEEAAKRLMAKIQA

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=227, Percent_Identity=29.9559471365639, Blast_Score=86, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324967, Length=227, Percent_Identity=26.431718061674, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324975, Length=227, Percent_Identity=26.431718061674, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24568; Mature: 24568

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILMVLTSHDKLGDTGKKTGFWLEEFAAPYYAFLDAGVNITIASPAGGQPPLDPSSDTP
CCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
DAQTKDTKRFKEDSEAQERLATTKKLADMKAEDFDSVFYPGGHGPMWDLAVDKNSIELIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEECCCHHHHHH
TFIKQDKPVAFVCHSPAALKNVKIDGEYLVKGKTVTGFSNTEEEAVQLTDVVPFLLEDVL
HHHHCCCCEEEEECCCHHHHEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHH
KANGGNYEKSSDWESFVVEDGLLITGQNPASSEEAAKRLMAKIQA
HCCCCCCCCCCCHHHHEEECCEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILMVLTSHDKLGDTGKKTGFWLEEFAAPYYAFLDAGVNITIASPAGGQPPLDPSSDTP
CCEEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
DAQTKDTKRFKEDSEAQERLATTKKLADMKAEDFDSVFYPGGHGPMWDLAVDKNSIELIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEECCCHHHHHH
TFIKQDKPVAFVCHSPAALKNVKIDGEYLVKGKTVTGFSNTEEEAVQLTDVVPFLLEDVL
HHHHCCCCEEEEECCCHHHHEEEECCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHH
KANGGNYEKSSDWESFVVEDGLLITGQNPASSEEAAKRLMAKIQA
HCCCCCCCCCCCHHHHEEECCEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA