| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is maeB [H]
Identifier: 93005825
GI number: 93005825
Start: 1189066
End: 1191399
Strand: Reverse
Name: maeB [H]
Synonym: Pcryo_0997
Alternate gene names: 93005825
Gene position: 1191399-1189066 (Counterclockwise)
Preceding gene: 93005826
Following gene: 93005824
Centisome position: 38.94
GC content: 45.03
Gene sequence:
>2334_bases ATGGCAATTATTATGAATGACGATATCACTTTGAATACGGACACCCCTAGTACGGAAAAAGAGCAGTTTGAACAAGCTGC CTTACATTACCATGAGTTCCCTCGCCCTGGTAAAATCTCAGTTACTCCTATCAAGCAATTGGCAAACCAACGTGATCTGG CGCTCGCCTATTCACCAGGCGTGGCAGTACCTTGTCTTGAGATTCAAAGAGACCCATCTCTTGCGGCAAAATATACCGCA CGTAGCAACTTAGTTGGTGTTATTACCAATGGTACAGCGGTGTTAGGTTTGGGAAATATCGGTCCATTGGCATCAAAGCC TGTTATGGAAGGCAAAGGGGTTCTATTCAAAAAGTTCGCTGGTATCGACGTTTTTGATATTGAAATTGCACAAAACGATC CGGACAAATTCATTGAGGCTGTTGCTTCTTTAGAGCCTACGTTTGGTGGGATTAATTTAGAAGACATCAAAGCACCAGAG TGTTTCAAAATCGAGCGCGAACTGCGTAAGCGTATGAACATTCCAGTATTCCATGATGACCAACATGGCACGTCAATCAT TGTTGCGGCGGCGATGCTTAATGCATTAATCATCACGAACAAAAAAATTGAAGATATTAAAATCATTTGTTCTGGTGCCG GTGCTGCAGCGATTTCTTGCTTGGATATCATTTGTGCCCTTGGTGTGAATAAAAACAATATCTACGTATCAGACTCACGT GGCATTATCTCTACTACCCGTGAAAACCTTGATGAAACCAAACAGCGCTATGCTCGTGAAACCACTGCTACGACTATTGA AGAGCTGATGGATGATGTCGACATGTTCCTAGGCTTATCTATGCCGGGTACATTGACAGAAGACATGGTTCGCCGTATGG CAAAAGACCCTATCATCTTTGCGCTTGCTAACCCAACGCCTGAGATCATGCCAGAAATCGCCCATGCCGTCCGTCCAGAC GTTATTATGGCAACCGGTCGCTCTGATTATCCGAACCAAGTAAACAACGCATTGTGTTTCCCTTATATCTTCCGCGGTGC ATTAGATGTAGGCGCAACGACTGTCAACGAAGAAATGAAAATTGCATGCGTACGCGCCATTGCTGCCATGGCACATGTTG AAGCGACGCCAATGAGCAACGTCAAAAACGTTGAAAGTACGCCAAGCTTTGGTCGTGATTACCTGATCCCAGGACCACTT GAGCCAAACCTAATCATTGAAATCGCCTCTGCAGTCGCAAAAGCGGCTATGGATTCAGGCGTTGCAACGCTTCCTATCGC AGATATGAAAGCCTATCGTCAGCGTCTGTCTGAGTTTGTCTATAACTCAGCGTTTGTAATGAAGCCTATTTTTGCTCGTG CAAAAGCAGATCCAAAACGTATCGTTTACTGTGAAGGCGAAGACAGCAACGTACTATTAGCGGTACAAGTGGTCGTCGAT GAGCAGTTGGCTTATCCAATCTTGGTCGGTCGTCCCTCAGTGATCGAAAATAACATCGCCAAGCTAGCATTACGCTTGAA AGACGGCGTGAACATTACTATTGTCAATGTTGATGATGATCCGCGCTATAACGATTACTGGAAAGGCTACTACGAGAAAA ACAAACGTACTGGGGTCAGTATCGAGCTTGCTCGCCGTGATGTGCGCCGCAAGACCTCTTTAATTGGTGCTCTTTTGGTT GAAAATGGCGATGCCGATGGTATGATTTGTGGTACATTCGGTCACTATCAGCTGCATTTAAAATATGTTGGCGGAGTAAT CAACAAAAAAGAAGGTATTAATGATTTTTATGCGATGAATGCGGTGCTTATGCAGGATCGTAATATTTTTATTGCTGATA CCTATATCCATGAAGATCCAACGGCTGAGCAATTGGCTGAGATGACTGTATTGGCAGCTGAGCAATTGTGCCGCTTTAGC ATTACCCCACGTGTGGCTTTGGTGTCGCATTCAAACTTCGGAACTTCTGATCGTGCCAGTGCTGTCAAAATGCGTAAAGT ACATCAACTGCTGACCGAGATGAATGTCGATTTTGAGTTTGACGGTGAAATGCAAGGTGATGCTGCACTTGACGAACATA TCCGTGCCAATGACTTGCCTTCGAGCAACCTTAAAGGTTCAGCAAATCTACTTATCTTGCCAACGTTAGATGCGTCGAAC ATTGCCTTTAACCTGCTTAAGACAGCAACCGGTAGCGCGTCTATCGGTCCTATTTTGTTAGGTGCAAGCAAACCTGTACA TATTCTAACGCCATCAGCCACAGCGCGCCGTGTGGTTAATATGACGGCACTTGCGGTCACTGAAGCTCAGGATTTAGACA ACGAGAAACAGTAA
Upstream 100 bases:
>100_bases CCTTTAACAATCAATGTACACTCATGATCATATTCAATGGTTATTGAGAATTAGGCATTAGTTTTTATCACCATTTAATT TATTCCAATTTATCCTAACC
Downstream 100 bases:
>100_bases TTGATTATGCTCTGTAAAGTGCGCAATTTACACGGTCTCTTGCATTTTTTATAGAGACCGTCTGCTATACTAAAACCAGC CAATGCTTAAAGTATTGGCT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 777; Mature: 776
Protein sequence:
>777_residues MAIIMNDDITLNTDTPSTEKEQFEQAALHYHEFPRPGKISVTPIKQLANQRDLALAYSPGVAVPCLEIQRDPSLAAKYTA RSNLVGVITNGTAVLGLGNIGPLASKPVMEGKGVLFKKFAGIDVFDIEIAQNDPDKFIEAVASLEPTFGGINLEDIKAPE CFKIERELRKRMNIPVFHDDQHGTSIIVAAAMLNALIITNKKIEDIKIICSGAGAAAISCLDIICALGVNKNNIYVSDSR GIISTTRENLDETKQRYARETTATTIEELMDDVDMFLGLSMPGTLTEDMVRRMAKDPIIFALANPTPEIMPEIAHAVRPD VIMATGRSDYPNQVNNALCFPYIFRGALDVGATTVNEEMKIACVRAIAAMAHVEATPMSNVKNVESTPSFGRDYLIPGPL EPNLIIEIASAVAKAAMDSGVATLPIADMKAYRQRLSEFVYNSAFVMKPIFARAKADPKRIVYCEGEDSNVLLAVQVVVD EQLAYPILVGRPSVIENNIAKLALRLKDGVNITIVNVDDDPRYNDYWKGYYEKNKRTGVSIELARRDVRRKTSLIGALLV ENGDADGMICGTFGHYQLHLKYVGGVINKKEGINDFYAMNAVLMQDRNIFIADTYIHEDPTAEQLAEMTVLAAEQLCRFS ITPRVALVSHSNFGTSDRASAVKMRKVHQLLTEMNVDFEFDGEMQGDAALDEHIRANDLPSSNLKGSANLLILPTLDASN IAFNLLKTATGSASIGPILLGASKPVHILTPSATARRVVNMTALAVTEAQDLDNEKQ
Sequences:
>Translated_777_residues MAIIMNDDITLNTDTPSTEKEQFEQAALHYHEFPRPGKISVTPIKQLANQRDLALAYSPGVAVPCLEIQRDPSLAAKYTA RSNLVGVITNGTAVLGLGNIGPLASKPVMEGKGVLFKKFAGIDVFDIEIAQNDPDKFIEAVASLEPTFGGINLEDIKAPE CFKIERELRKRMNIPVFHDDQHGTSIIVAAAMLNALIITNKKIEDIKIICSGAGAAAISCLDIICALGVNKNNIYVSDSR GIISTTRENLDETKQRYARETTATTIEELMDDVDMFLGLSMPGTLTEDMVRRMAKDPIIFALANPTPEIMPEIAHAVRPD VIMATGRSDYPNQVNNALCFPYIFRGALDVGATTVNEEMKIACVRAIAAMAHVEATPMSNVKNVESTPSFGRDYLIPGPL EPNLIIEIASAVAKAAMDSGVATLPIADMKAYRQRLSEFVYNSAFVMKPIFARAKADPKRIVYCEGEDSNVLLAVQVVVD EQLAYPILVGRPSVIENNIAKLALRLKDGVNITIVNVDDDPRYNDYWKGYYEKNKRTGVSIELARRDVRRKTSLIGALLV ENGDADGMICGTFGHYQLHLKYVGGVINKKEGINDFYAMNAVLMQDRNIFIADTYIHEDPTAEQLAEMTVLAAEQLCRFS ITPRVALVSHSNFGTSDRASAVKMRKVHQLLTEMNVDFEFDGEMQGDAALDEHIRANDLPSSNLKGSANLLILPTLDASN IAFNLLKTATGSASIGPILLGASKPVHILTPSATARRVVNMTALAVTEAQDLDNEKQ >Mature_776_residues AIIMNDDITLNTDTPSTEKEQFEQAALHYHEFPRPGKISVTPIKQLANQRDLALAYSPGVAVPCLEIQRDPSLAAKYTAR SNLVGVITNGTAVLGLGNIGPLASKPVMEGKGVLFKKFAGIDVFDIEIAQNDPDKFIEAVASLEPTFGGINLEDIKAPEC FKIERELRKRMNIPVFHDDQHGTSIIVAAAMLNALIITNKKIEDIKIICSGAGAAAISCLDIICALGVNKNNIYVSDSRG IISTTRENLDETKQRYARETTATTIEELMDDVDMFLGLSMPGTLTEDMVRRMAKDPIIFALANPTPEIMPEIAHAVRPDV IMATGRSDYPNQVNNALCFPYIFRGALDVGATTVNEEMKIACVRAIAAMAHVEATPMSNVKNVESTPSFGRDYLIPGPLE PNLIIEIASAVAKAAMDSGVATLPIADMKAYRQRLSEFVYNSAFVMKPIFARAKADPKRIVYCEGEDSNVLLAVQVVVDE QLAYPILVGRPSVIENNIAKLALRLKDGVNITIVNVDDDPRYNDYWKGYYEKNKRTGVSIELARRDVRRKTSLIGALLVE NGDADGMICGTFGHYQLHLKYVGGVINKKEGINDFYAMNAVLMQDRNIFIADTYIHEDPTAEQLAEMTVLAAEQLCRFSI TPRVALVSHSNFGTSDRASAVKMRKVHQLLTEMNVDFEFDGEMQGDAALDEHIRANDLPSSNLKGSANLLILPTLDASNI AFNLLKTATGSASIGPILLGASKPVHILTPSATARRVVNMTALAVTEAQDLDNEKQ
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=364, Percent_Identity=26.0989010989011, Blast_Score=94, Evalue=7e-19, Organism=Homo sapiens, GI62420882, Length=365, Percent_Identity=26.8493150684932, Blast_Score=87, Evalue=8e-17, Organism=Homo sapiens, GI62420880, Length=365, Percent_Identity=26.8493150684932, Blast_Score=87, Evalue=8e-17, Organism=Homo sapiens, GI239049447, Length=365, Percent_Identity=26.8493150684932, Blast_Score=87, Evalue=8e-17, Organism=Escherichia coli, GI1788806, Length=753, Percent_Identity=58.3001328021248, Blast_Score=905, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=342, Percent_Identity=28.9473684210526, Blast_Score=125, Evalue=1e-29, Organism=Escherichia coli, GI1788800, Length=321, Percent_Identity=26.4797507788162, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI87081919, Length=510, Percent_Identity=23.1372549019608, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17537199, Length=345, Percent_Identity=27.536231884058, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=323, Percent_Identity=29.4117647058824, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI281362674, Length=491, Percent_Identity=25.050916496945, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI281362672, Length=491, Percent_Identity=25.050916496945, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI21356279, Length=491, Percent_Identity=25.050916496945, Blast_Score=99, Evalue=2e-20, Organism=Drosophila melanogaster, GI78707242, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI78707238, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI78707240, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI24646388, Length=406, Percent_Identity=26.1083743842365, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI24646386, Length=406, Percent_Identity=26.1083743842365, Blast_Score=81, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 84872; Mature: 84740
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIMNDDITLNTDTPSTEKEQFEQAALHYHEFPRPGKISVTPIKQLANQRDLALAYSPG CEEEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHCCCCCEEEEECCC VAVPCLEIQRDPSLAAKYTARSNLVGVITNGTAVLGLGNIGPLASKPVMEGKGVLFKKFA CCCEEEEECCCCCHHEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEHCC GIDVFDIEIAQNDPDKFIEAVASLEPTFGGINLEDIKAPECFKIERELRKRMNIPVFHDD CCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEECC QHGTSIIVAAAMLNALIITNKKIEDIKIICSGAGAAAISCLDIICALGVNKNNIYVSDSR CCCCHHHHHHHHHHHHEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCC GIISTTRENLDETKQRYARETTATTIEELMDDVDMFLGLSMPGTLTEDMVRRMAKDPIIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEE ALANPTPEIMPEIAHAVRPDVIMATGRSDYPNQVNNALCFPYIFRGALDVGATTVNEEMK EECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCEEHHHHHHHHHHCCCEECCHHHH IACVRAIAAMAHVEATPMSNVKNVESTPSFGRDYLIPGPLEPNLIIEIASAVAKAAMDSG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC VATLPIADMKAYRQRLSEFVYNSAFVMKPIFARAKADPKRIVYCEGEDSNVLLAVQVVVD CEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEEC EQLAYPILVGRPSVIENNIAKLALRLKDGVNITIVNVDDDPRYNDYWKGYYEKNKRTGVS CCCCCEEEECCCHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCHHHCCHHHCCCCCCCE IELARRDVRRKTSLIGALLVENGDADGMICGTFGHYQLHLKYVGGVINKKEGINDFYAMN EHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEEEEEECCCHHCCCCCCCHHHHHH AVLMQDRNIFIADTYIHEDPTAEQLAEMTVLAAEQLCRFSITPRVALVSHSNFGTSDRAS EEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH AVKMRKVHQLLTEMNVDFEFDGEMQGDAALDEHIRANDLPSSNLKGSANLLILPTLDASN HHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCH IAFNLLKTATGSASIGPILLGASKPVHILTPSATARRVVNMTALAVTEAQDLDNEKQ HHHHHHHHCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHEEEECHHCCCCCCC >Mature Secondary Structure AIIMNDDITLNTDTPSTEKEQFEQAALHYHEFPRPGKISVTPIKQLANQRDLALAYSPG EEEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHCCCCCEEEEECCC VAVPCLEIQRDPSLAAKYTARSNLVGVITNGTAVLGLGNIGPLASKPVMEGKGVLFKKFA CCCEEEEECCCCCHHEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEHCC GIDVFDIEIAQNDPDKFIEAVASLEPTFGGINLEDIKAPECFKIERELRKRMNIPVFHDD CCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEECC QHGTSIIVAAAMLNALIITNKKIEDIKIICSGAGAAAISCLDIICALGVNKNNIYVSDSR CCCCHHHHHHHHHHHHEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCC GIISTTRENLDETKQRYARETTATTIEELMDDVDMFLGLSMPGTLTEDMVRRMAKDPIIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEE ALANPTPEIMPEIAHAVRPDVIMATGRSDYPNQVNNALCFPYIFRGALDVGATTVNEEMK EECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCEEHHHHHHHHHHCCCEECCHHHH IACVRAIAAMAHVEATPMSNVKNVESTPSFGRDYLIPGPLEPNLIIEIASAVAKAAMDSG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC VATLPIADMKAYRQRLSEFVYNSAFVMKPIFARAKADPKRIVYCEGEDSNVLLAVQVVVD CEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEEEEC EQLAYPILVGRPSVIENNIAKLALRLKDGVNITIVNVDDDPRYNDYWKGYYEKNKRTGVS CCCCCEEEECCCHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCHHHCCHHHCCCCCCCE IELARRDVRRKTSLIGALLVENGDADGMICGTFGHYQLHLKYVGGVINKKEGINDFYAMN EHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEEEEEECCCHHCCCCCCCHHHHHH AVLMQDRNIFIADTYIHEDPTAEQLAEMTVLAAEQLCRFSITPRVALVSHSNFGTSDRAS EEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHH AVKMRKVHQLLTEMNVDFEFDGEMQGDAALDEHIRANDLPSSNLKGSANLLILPTLDASN HHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCH IAFNLLKTATGSASIGPILLGASKPVHILTPSATARRVVNMTALAVTEAQDLDNEKQ HHHHHHHHCCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHEEEECHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]