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The map label for this gene is ureF [H]

Identifier: 93005812

GI number: 93005812

Start: 1174888

End: 1175697

Strand: Reverse

Name: ureF [H]

Synonym: Pcryo_0984

Alternate gene names: 93005812

Gene position: 1175697-1174888 (Counterclockwise)

Preceding gene: 93005813

Following gene: 93005811

Centisome position: 38.42

GC content: 45.19

Gene sequence:

>810_bases
ATGACTAATCATGCCACGCACTATCCTACCAGTACCGCACAAGGTATGAATGATCTGAATAATGCAGATGTGACCGGACG
TTTGCTCATGCTGGCGTCAAGCAACTTACCTATTGGCAGTTATACCTACTCGCAAGGTATAGAACCGGCTATTGAGTCAG
GGCTTATTCATGATGAAAGCAGTAGTATGGATTTTATGAGTGATTATCTGGAGCTGGCATTATGTCGTTATGAGCTACCG
CTACTAGCACTCATTATTGAAGCCCTTATGATTGAGGACGTCGCACTTGCTGATGCTATAGGTGCAGATTACCACGCTAG
CCGCGAAACCAAAGAGTTCGTCTATGAATCAAGTCAATTGGCTCTGTCTTTATCCGCATGGCTTGATAATGTCCTTGAGC
TTAATGTGCCTGATAGCTTACTCGCTCATGGGTTTTTGCCACTGTTTGCCCATATCAGCTCGCACTGGCAATTTAACCCT
GTACAAGCCATGACCACTTACGCTTTTGGTCAAATCGAAAATATGGTGCTGGCTGCGGTCAAGACCGTACCGCTTGGACA
AATGGCAGGACAGCGAATCATTTGGCAGCTGCAACAGCTATTAAGCCAACAAATACAGCCACTGGCTGCTCGCGTCAAGC
AAAGTTTTTTGTACGCTCAAAGGCTGCCGTTAGTGGCAGATACGCCTGACATAGCGATATCAAAGCTAAATCTACTTTAT
CAACAGCTACAAATATCAGCTAACTTACCAAATTTAGCGCTCCTGTCTTGCCAGCATGAAAGGCAATATAGCCGCTTATT
TCGCTCTTAA

Upstream 100 bases:

>100_bases
AAAGGCAATCAAGGCGGACATTCTCACTCCCATGGTCATGGTAATAATCATAATCACAGTCATCACAATCACGACCATTC
ACACACCCATGGCAACTCTC

Downstream 100 bases:

>100_bases
TGGCTGAAAACCCTAACACTTATTAAGGAACTTTATTTATGGCACTAACTCCTAAAGTCGAAAACAAACATTCAGACACG
ACATTATCACCACTACGCTT

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTNHATHYPTSTAQGMNDLNNADVTGRLLMLASSNLPIGSYTYSQGIEPAIESGLIHDESSSMDFMSDYLELALCRYELP
LLALIIEALMIEDVALADAIGADYHASRETKEFVYESSQLALSLSAWLDNVLELNVPDSLLAHGFLPLFAHISSHWQFNP
VQAMTTYAFGQIENMVLAAVKTVPLGQMAGQRIIWQLQQLLSQQIQPLAARVKQSFLYAQRLPLVADTPDIAISKLNLLY
QQLQISANLPNLALLSCQHERQYSRLFRS

Sequences:

>Translated_269_residues
MTNHATHYPTSTAQGMNDLNNADVTGRLLMLASSNLPIGSYTYSQGIEPAIESGLIHDESSSMDFMSDYLELALCRYELP
LLALIIEALMIEDVALADAIGADYHASRETKEFVYESSQLALSLSAWLDNVLELNVPDSLLAHGFLPLFAHISSHWQFNP
VQAMTTYAFGQIENMVLAAVKTVPLGQMAGQRIIWQLQQLLSQQIQPLAARVKQSFLYAQRLPLVADTPDIAISKLNLLY
QQLQISANLPNLALLSCQHERQYSRLFRS
>Mature_268_residues
TNHATHYPTSTAQGMNDLNNADVTGRLLMLASSNLPIGSYTYSQGIEPAIESGLIHDESSSMDFMSDYLELALCRYELPL
LALIIEALMIEDVALADAIGADYHASRETKEFVYESSQLALSLSAWLDNVLELNVPDSLLAHGFLPLFAHISSHWQFNPV
QAMTTYAFGQIENMVLAAVKTVPLGQMAGQRIIWQLQQLLSQQIQPLAARVKQSFLYAQRLPLVADTPDIAISKLNLLYQ
QLQISANLPNLALLSCQHERQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 29925; Mature: 29793

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNHATHYPTSTAQGMNDLNNADVTGRLLMLASSNLPIGSYTYSQGIEPAIESGLIHDES
CCCCCCCCCCHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCHHHCCCHHHHCCCCCCCC
SSMDFMSDYLELALCRYELPLLALIIEALMIEDVALADAIGADYHASRETKEFVYESSQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH
ALSLSAWLDNVLELNVPDSLLAHGFLPLFAHISSHWQFNPVQAMTTYAFGQIENMVLAAV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KTVPLGQMAGQRIIWQLQQLLSQQIQPLAARVKQSFLYAQRLPLVADTPDIAISKLNLLY
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH
QQLQISANLPNLALLSCQHERQYSRLFRS
HHHHHHCCCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNHATHYPTSTAQGMNDLNNADVTGRLLMLASSNLPIGSYTYSQGIEPAIESGLIHDES
CCCCCCCCCHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCHHHCCCHHHHCCCCCCCC
SSMDFMSDYLELALCRYELPLLALIIEALMIEDVALADAIGADYHASRETKEFVYESSQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH
ALSLSAWLDNVLELNVPDSLLAHGFLPLFAHISSHWQFNPVQAMTTYAFGQIENMVLAAV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KTVPLGQMAGQRIIWQLQQLLSQQIQPLAARVKQSFLYAQRLPLVADTPDIAISKLNLLY
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHH
QQLQISANLPNLALLSCQHERQYSRLFRS
HHHHHHCCCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA