| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is maeA [H]
Identifier: 93005810
GI number: 93005810
Start: 1172106
End: 1173788
Strand: Direct
Name: maeA [H]
Synonym: Pcryo_0982
Alternate gene names: 93005810
Gene position: 1172106-1173788 (Clockwise)
Preceding gene: 93005797
Following gene: 93005829
Centisome position: 38.31
GC content: 41.59
Gene sequence:
>1683_bases ATGTTAAACCAACGTCCGTTATATATCCCCTTTGCAGGTCCTGCACTATTAGAAACCCCTTTATTGAATAAGGGCAGTGC TTTTTCATCAGAGGAGCGCGATAGCTTTAATTTAACCGGTCTATTACCTCATAATATTGAGACGATTGAAGAGCAGTCAT CACGTGCTTATCTTCAACTACGCTCATTTACCAGTGATATGGATAAGCATATTTATTTGCGTAATATACAAGACACTAAT GAGACATTATTTCACCATTTGATTGAGCAGCATATTGAGGAAGTCATGCCGCTCATCTATACCCCTACGGTTGGGCAAGC TTGTGAAAAATTCTCTCAAATTTATCGCCGTAAACGTGGTTTATTTATTTCTTATCCTGAACGTCATAAAATCGATGACA TGTTGCAAAACGCCACCAAACAAAACGTAAAAGTTATCGTGGTCACTGATGGCGAACGTATCTTGGGCTTAGGTGACCAA GGTATTGGCGGTATGGGAATTCCAATTGGTAAATTGGCTTTATACACCGCTTGTGGTGGTATTAGTCCAGCTTATTGCTT ACCTATTTTGTTAGATGTCGGTACCAATAATCAGCAGTTGCTTGACGATCCTATGTATATGGGATGGAGAAATCCACGCA TCTCTGGCGATGAGTACAATGAATTTGTAGACTTATTTATTCAGGCTGTTAAGCGTCGTTGGCCCGAGGTGTTATTGCAA TTTGAAGATTTTGCACAGGAAAATGCGACCCCATTATTGAATAAATATCGTGATCAGCTCTGTTGCTTTAATGATGATAT TCAAGGAACTGCTGCTGTTTCAGTCGGTACATTGATTGCAGCATGTTTAAATAAAAGCCAGAAACTTAGTCAACAAAATA TTGCTTTCTTGGGTGCAGGATCTGCAGGCTGCGGTATCGCTGAGCACATTATTCGTCAGATGCAGCGTGAAGGGTTAACA GAAGAGCAAGCTCGCAGACAGGTATTTATGGTTGACCGTTATGGTCTGCTAACCGATAGCATGACAGAGCTACAAAAATT CCAAACACCGTTAGTGCAAAAAGAATCAGATATTGAACATTGGGATAAGAGTCAAAAACTTGGGTTAGCACAAGTGGTTA AACAAGCAAGAATAACTGTCTTGTTTGGCGTAAGCGGACAAAAAGGTCTCTTTACGCAAGAGGTCGTCGAAGCTTTATGT GCTAATACTGAACATCCTATTGTATTGCCGCTATCAAATCCAACGTCGCGTGTTGAAGCAACACCGCAAGAAGTGACCAA CTGGAGTCGTGGTAAGGCCATTGTTGCAACGGGCAGTCCTTTTCCTAATACCACTTTTGAAGGCCAGTCTTACGAGGTTT CGCAGTGTAATAATAGCTACATATTCCCAGGCATTGGTTTAGGTGTATTAGCAGCACGTGCGACGGGTATCAGCGATAAT ATGCTGACGGCAGCAAGCCAAGCACTTGCAGATATCTCAGTAGAATATGAAAAAGCGCCAGGTGCCATATTGCCGCCCAT TAAATTCATTAGAGAAATCAGTGAAAAAATAGCCTATGCAGTTGCCTTGCAAGCGATTGAAGATAAATTGGCATTACCAG TCACGGCAGAAAACTTAGAGCGTCGATTAAAAGCTAACTTCTGGTTACCTAAATACCGCGACTATCGCCGTACTTCTTTC TAA
Upstream 100 bases:
>100_bases AACCATAAATTTAAATAATTTCATTTGTTTAATGAATCGATAAAAATATTTAACCCATTAACCTTGTACCACCCCATACT TTTAATAAGAAGATTTTATC
Downstream 100 bases:
>100_bases CGGTTAGAAAATCCGACCAAGAAGCCGAATGCTACGATTAAAAGTAGCATTCGGCTTTTTTAATGATAACAATGCTAATC CATTAGCCGTTGACGTTTTG
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MLNQRPLYIPFAGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQLRSFTSDMDKHIYLRNIQDTN ETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQ GIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTNNQQLLDDPMYMGWRNPRISGDEYNEFVDLFIQAVKRRWPEVLLQ FEDFAQENATPLLNKYRDQLCCFNDDIQGTAAVSVGTLIAACLNKSQKLSQQNIAFLGAGSAGCGIAEHIIRQMQREGLT EEQARRQVFMVDRYGLLTDSMTELQKFQTPLVQKESDIEHWDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALC ANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDN MLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPVTAENLERRLKANFWLPKYRDYRRTSF
Sequences:
>Translated_560_residues MLNQRPLYIPFAGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQLRSFTSDMDKHIYLRNIQDTN ETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQ GIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTNNQQLLDDPMYMGWRNPRISGDEYNEFVDLFIQAVKRRWPEVLLQ FEDFAQENATPLLNKYRDQLCCFNDDIQGTAAVSVGTLIAACLNKSQKLSQQNIAFLGAGSAGCGIAEHIIRQMQREGLT EEQARRQVFMVDRYGLLTDSMTELQKFQTPLVQKESDIEHWDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALC ANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDN MLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPVTAENLERRLKANFWLPKYRDYRRTSF >Mature_560_residues MLNQRPLYIPFAGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQLRSFTSDMDKHIYLRNIQDTN ETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQ GIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTNNQQLLDDPMYMGWRNPRISGDEYNEFVDLFIQAVKRRWPEVLLQ FEDFAQENATPLLNKYRDQLCCFNDDIQGTAAVSVGTLIAACLNKSQKLSQQNIAFLGAGSAGCGIAEHIIRQMQREGLT EEQARRQVFMVDRYGLLTDSMTELQKFQTPLVQKESDIEHWDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALC ANTEHPIVLPLSNPTSRVEATPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDN MLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPVTAENLERRLKANFWLPKYRDYRRTSF
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=521, Percent_Identity=43.5700575815739, Blast_Score=442, Evalue=1e-124, Organism=Homo sapiens, GI62420882, Length=562, Percent_Identity=39.6797153024911, Blast_Score=421, Evalue=1e-117, Organism=Homo sapiens, GI62420880, Length=562, Percent_Identity=39.6797153024911, Blast_Score=421, Evalue=1e-117, Organism=Homo sapiens, GI239049447, Length=562, Percent_Identity=39.6797153024911, Blast_Score=421, Evalue=1e-117, Organism=Homo sapiens, GI4505145, Length=555, Percent_Identity=40.5405405405405, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI270265879, Length=466, Percent_Identity=42.9184549356223, Blast_Score=379, Evalue=1e-105, Organism=Escherichia coli, GI87081919, Length=558, Percent_Identity=63.7992831541219, Blast_Score=729, Evalue=0.0, Organism=Caenorhabditis elegans, GI17537199, Length=546, Percent_Identity=41.7582417582418, Blast_Score=407, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6322823, Length=564, Percent_Identity=42.3758865248227, Blast_Score=433, Evalue=1e-122, Organism=Drosophila melanogaster, GI24646386, Length=512, Percent_Identity=42.96875, Blast_Score=430, Evalue=1e-120, Organism=Drosophila melanogaster, GI24646388, Length=512, Percent_Identity=42.96875, Blast_Score=429, Evalue=1e-120, Organism=Drosophila melanogaster, GI281362672, Length=516, Percent_Identity=42.6356589147287, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI21356279, Length=516, Percent_Identity=42.6356589147287, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI281362674, Length=516, Percent_Identity=42.6356589147287, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI78707240, Length=532, Percent_Identity=36.6541353383459, Blast_Score=360, Evalue=1e-99, Organism=Drosophila melanogaster, GI78707242, Length=533, Percent_Identity=36.7729831144465, Blast_Score=359, Evalue=2e-99, Organism=Drosophila melanogaster, GI78707238, Length=533, Percent_Identity=36.7729831144465, Blast_Score=359, Evalue=2e-99, Organism=Drosophila melanogaster, GI281363505, Length=510, Percent_Identity=34.7058823529412, Blast_Score=350, Evalue=2e-96, Organism=Drosophila melanogaster, GI78707236, Length=510, Percent_Identity=34.7058823529412, Blast_Score=350, Evalue=2e-96, Organism=Drosophila melanogaster, GI78707232, Length=507, Percent_Identity=34.7140039447732, Blast_Score=348, Evalue=7e-96, Organism=Drosophila melanogaster, GI281363503, Length=508, Percent_Identity=34.4488188976378, Blast_Score=346, Evalue=3e-95, Organism=Drosophila melanogaster, GI19922384, Length=547, Percent_Identity=29.4332723948812, Blast_Score=252, Evalue=6e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 62601; Mature: 62601
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNQRPLYIPFAGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQL CCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH RSFTSDMDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRG HHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCC LFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGG CEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHCC ISPAYCLPILLDVGTNNQQLLDDPMYMGWRNPRISGDEYNEFVDLFIQAVKRRWPEVLLQ CCHHHHHHHHEECCCCCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FEDFAQENATPLLNKYRDQLCCFNDDIQGTAAVSVGTLIAACLNKSQKLSQQNIAFLGAG HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEECC SAGCGIAEHIIRQMQREGLTEEQARRQVFMVDRYGLLTDSMTELQKFQTPLVQKESDIEH CCCCCHHHHHHHHHHHCCCCHHHHHCEEEEEECCCCHHHHHHHHHHHHCHHHCCCCCHHH WDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALCANTEHPIVLPLSNPTSRVEA HCHHHCCCHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHCCC TPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDN CHHHHCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCEECCCCHHHHHHHHHCCCCCH MLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPVTAENLE HHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RRLKANFWLPKYRDYRRTSF HHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure MLNQRPLYIPFAGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQL CCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH RSFTSDMDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRG HHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCC LFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGG CEEECCCCCCHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHCC ISPAYCLPILLDVGTNNQQLLDDPMYMGWRNPRISGDEYNEFVDLFIQAVKRRWPEVLLQ CCHHHHHHHHEECCCCCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FEDFAQENATPLLNKYRDQLCCFNDDIQGTAAVSVGTLIAACLNKSQKLSQQNIAFLGAG HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEECC SAGCGIAEHIIRQMQREGLTEEQARRQVFMVDRYGLLTDSMTELQKFQTPLVQKESDIEH CCCCCHHHHHHHHHHHCCCCHHHHHCEEEEEECCCCHHHHHHHHHHHHCHHHCCCCCHHH WDKSQKLGLAQVVKQARITVLFGVSGQKGLFTQEVVEALCANTEHPIVLPLSNPTSRVEA HCHHHCCCHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHCCC TPQEVTNWSRGKAIVATGSPFPNTTFEGQSYEVSQCNNSYIFPGIGLGVLAARATGISDN CHHHHCCCCCCCEEEECCCCCCCCCCCCCCEECCCCCCCEECCCCHHHHHHHHHCCCCCH MLTAASQALADISVEYEKAPGAILPPIKFIREISEKIAYAVALQAIEDKLALPVTAENLE HHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RRLKANFWLPKYRDYRRTSF HHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA