| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005732
Identifier: 93005732
GI number: 93005732
Start: 1071059
End: 1071955
Strand: Direct
Name: 93005732
Synonym: Pcryo_0904
Alternate gene names: NA
Gene position: 1071059-1071955 (Clockwise)
Preceding gene: 93005731
Following gene: 93005736
Centisome position: 35.0
GC content: 44.82
Gene sequence:
>897_bases TTGTCAGATAACGTATCCATTTTATTTTGTATCGACTATAAAACTATCATTCAACCGAGAAGTAACTATCCTGTGGAACT AATCATTTTCTTAATAATAGGCGCTCTAGCAGGATTTGCTGCGGGGCTTTTTGGTGTGGGCGGCGGCACGATTATCGTAC CACTATTATTTATCGTCTTTACCCAAATGGATTACAGTCCTGACAGTATCATGCATTTGGCCTTAGGTACGTCACTGGCG ACCATCATTGTCACCTCTATCAGCTCGCTTATGGCGCATAATAAAAAGGGCGCCGTCATGTGGCCTGTTTTTAAAAACCT AGCACCCGGCTTAGCGATTGGCTGTTTTTTAGGGGCAGGGATTGCAGGACAGATATCTGGGCTGTATCTTCAGCTTATCG TTGGGGTGTTTTTGCTGTGGGTCGCTTATAAGATGTTTTTCGCTGGTAAAAAGCAGGTCGTTAGTCATGCTGATGATGTC AATGGCGCTAATACGGAACTGCCCTCAAAACCTAAGCAGCTAGCGGCAGGCGGGGTTATTGGTATTGCTTCTGCCATTTT TGGTATTGGCGGCGGCAGCTTAACGGTGCCTTATTTAACTCGTTACGGTGTGGTCATGCAAAAAGCCGTTGGCACGTCAG CAGCGTGTGGCTTGCCCATTGCCATCGCTGGAGCATTAGGCTTTATGTTCTTTGGGATGCAGCAACAAGTTGATGTGCCC AATACCATTGGCTTTGTCCACATTTATGCCTTTTTAGGGATTAGTATCATGAGCTTTTTCACCGCTAAGTTAGGTGCAAA AGTCGCCCATATACTATCACCAGAGCTTTTAAAAAAATGCTTTGCAGTATTATTAACCGTGGTTGGGTGCTATTTCCTTT TTAAAGGGCTGGTTTAG
Upstream 100 bases:
>100_bases TAGCTCAATATCAAGAAGATACCGTGAAACTGGAATGAATTTTTTGTAGCCTTTGTCGGCGTAGGCACAGCAAGCTAGAA AAATTTGTACCAGTTTCACC
Downstream 100 bases:
>100_bases GTATTCATAGTCGTTCCTCTAAAAGGCAAAGCTTGCGAACTGAGCTACCCAAAAAGCACATAGTGGAATGCATTATCATG ATCTAAATAATCCAAAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSDNVSILFCIDYKTIIQPRSNYPVELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMDYSPDSIMHLALGTSLA TIIVTSISSLMAHNKKGAVMWPVFKNLAPGLAIGCFLGAGIAGQISGLYLQLIVGVFLLWVAYKMFFAGKKQVVSHADDV NGANTELPSKPKQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMFFGMQQQVDVP NTIGFVHIYAFLGISIMSFFTAKLGAKVAHILSPELLKKCFAVLLTVVGCYFLFKGLV
Sequences:
>Translated_298_residues MSDNVSILFCIDYKTIIQPRSNYPVELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMDYSPDSIMHLALGTSLA TIIVTSISSLMAHNKKGAVMWPVFKNLAPGLAIGCFLGAGIAGQISGLYLQLIVGVFLLWVAYKMFFAGKKQVVSHADDV NGANTELPSKPKQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMFFGMQQQVDVP NTIGFVHIYAFLGISIMSFFTAKLGAKVAHILSPELLKKCFAVLLTVVGCYFLFKGLV >Mature_297_residues SDNVSILFCIDYKTIIQPRSNYPVELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVFTQMDYSPDSIMHLALGTSLAT IIVTSISSLMAHNKKGAVMWPVFKNLAPGLAIGCFLGAGIAGQISGLYLQLIVGVFLLWVAYKMFFAGKKQVVSHADDVN GANTELPSKPKQLAAGGVIGIASAIFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMFFGMQQQVDVPN TIGFVHIYAFLGISIMSFFTAKLGAKVAHILSPELLKKCFAVLLTVVGCYFLFKGLV
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 31342; Mature: 31211
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNVSILFCIDYKTIIQPRSNYPVELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVF CCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TQMDYSPDSIMHLALGTSLATIIVTSISSLMAHNKKGAVMWPVFKNLAPGLAIGCFLGAG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHCC IAGQISGLYLQLIVGVFLLWVAYKMFFAGKKQVVSHADDVNGANTELPSKPKQLAAGGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHH GIASAIFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMFFGMQQQVDVP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHCCCCC NTIGFVHIYAFLGISIMSFFTAKLGAKVAHILSPELLKKCFAVLLTVVGCYFLFKGLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDNVSILFCIDYKTIIQPRSNYPVELIIFLIIGALAGFAAGLFGVGGGTIIVPLLFIVF CCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TQMDYSPDSIMHLALGTSLATIIVTSISSLMAHNKKGAVMWPVFKNLAPGLAIGCFLGAG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHCC IAGQISGLYLQLIVGVFLLWVAYKMFFAGKKQVVSHADDVNGANTELPSKPKQLAAGGVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHH GIASAIFGIGGGSLTVPYLTRYGVVMQKAVGTSAACGLPIAIAGALGFMFFGMQQQVDVP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHCCCCC NTIGFVHIYAFLGISIMSFFTAKLGAKVAHILSPELLKKCFAVLLTVVGCYFLFKGLV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]