| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005684
Identifier: 93005684
GI number: 93005684
Start: 1013802
End: 1014359
Strand: Direct
Name: 93005684
Synonym: Pcryo_0856
Alternate gene names: NA
Gene position: 1013802-1014359 (Clockwise)
Preceding gene: 93005676
Following gene: 93005685
Centisome position: 33.13
GC content: 42.11
Gene sequence:
>558_bases ATGATGTCCTTAGCCTCAAAATCTTCTTCTAAAAACCTCAGCCATTTGATGATTGCGATGGCTGCGAGCAGTATGCTGCT TTTGAGCGCTTGTAATGATAGTAATACTCAAGCAGATACCAAAAAGGTTGAGAAGGTAGCAGATTTATCTATCTTTGAGG GCTGTTACACCGTCAGTCATGATGAGCCGGCGCAAATAAAAGTCAGCCAACAGGGCGGCGCATGGGTCATGCAGATGAAA GAGCCTGCAAGTGCCAAACGTGTTTGGGATGATGCTGAGCCGTTAGAGGTGATTGAAAATAGCGACATACCACAGTTTTT CTCTATAGACCCTGATAATGTCGATGCGGTGATTGGTCGTCCGGATAGAGTGTTGGTATTAGCTCATGTTAAGCCTGTTT ATGCCAATATCGATCCGCTACTTGATAGTGAGTACTTGTCTTATATCTATAAAGGAGCAAACACTATTTACCGAGTCGAA TGTGATGACGTTAATACTGATATTTTGGCCAATCCTCATGCCAATATTGTCATTGATAATGTTAAAGAGACTATTTAG
Upstream 100 bases:
>100_bases TTTTCTGTTAAAATAGAGCGGTTGTAAGGATATGTCTAGCCAGACATTAACTATAATTTGCTTAACTAAAGCTTTCAATG CTCGAATGCAGGATTACCCT
Downstream 100 bases:
>100_bases TTAGGTATTATCAGTCAATACTACATATCTGTTATTTATGATAAAAAGTGCTTTTTTATCAATACAATTTTGTTATAAAC CGTCGTATCATTAGAGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MMSLASKSSSKNLSHLMIAMAASSMLLLSACNDSNTQADTKKVEKVADLSIFEGCYTVSHDEPAQIKVSQQGGAWVMQMK EPASAKRVWDDAEPLEVIENSDIPQFFSIDPDNVDAVIGRPDRVLVLAHVKPVYANIDPLLDSEYLSYIYKGANTIYRVE CDDVNTDILANPHANIVIDNVKETI
Sequences:
>Translated_185_residues MMSLASKSSSKNLSHLMIAMAASSMLLLSACNDSNTQADTKKVEKVADLSIFEGCYTVSHDEPAQIKVSQQGGAWVMQMK EPASAKRVWDDAEPLEVIENSDIPQFFSIDPDNVDAVIGRPDRVLVLAHVKPVYANIDPLLDSEYLSYIYKGANTIYRVE CDDVNTDILANPHANIVIDNVKETI >Mature_185_residues MMSLASKSSSKNLSHLMIAMAASSMLLLSACNDSNTQADTKKVEKVADLSIFEGCYTVSHDEPAQIKVSQQGGAWVMQMK EPASAKRVWDDAEPLEVIENSDIPQFFSIDPDNVDAVIGRPDRVLVLAHVKPVYANIDPLLDSEYLSYIYKGANTIYRVE CDDVNTDILANPHANIVIDNVKETI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20360; Mature: 20360
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLASKSSSKNLSHLMIAMAASSMLLLSACNDSNTQADTKKVEKVADLSIFEGCYTVSH CCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEECCC DEPAQIKVSQQGGAWVMQMKEPASAKRVWDDAEPLEVIENSDIPQFFSIDPDNVDAVIGR CCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCHHHHHCCCCCCEEEECCCCCCEEEECC PDRVLVLAHVKPVYANIDPLLDSEYLSYIYKGANTIYRVECDDVNTDILANPHANIVIDN CCEEEEEEECCEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCEEEEC VKETI CHHCC >Mature Secondary Structure MMSLASKSSSKNLSHLMIAMAASSMLLLSACNDSNTQADTKKVEKVADLSIFEGCYTVSH CCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEECCC DEPAQIKVSQQGGAWVMQMKEPASAKRVWDDAEPLEVIENSDIPQFFSIDPDNVDAVIGR CCCCEEEEECCCCEEEEEECCCCCHHHCCCCCCHHHHHCCCCCCEEEECCCCCCEEEECC PDRVLVLAHVKPVYANIDPLLDSEYLSYIYKGANTIYRVECDDVNTDILANPHANIVIDN CCEEEEEEECCEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCCEEEEC VKETI CHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA