| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005640
Identifier: 93005640
GI number: 93005640
Start: 954540
End: 955763
Strand: Direct
Name: 93005640
Synonym: Pcryo_0810
Alternate gene names: NA
Gene position: 954540-955763 (Clockwise)
Preceding gene: 93005639
Following gene: 93005645
Centisome position: 31.2
GC content: 46.08
Gene sequence:
>1224_bases ATGTTTATCAAACTATTTTACACCTTGCGTACTTATGGCGTGCCAGTCAGTACGCGCGAGCTGCTCGATTTAAATGCTGC GTTAGAGCAAGGGCTGATGATGCAGCCGCATCCTGAAGATCCAGCATTGACTACTTTTGCCAGTCGTGAAGATATGTATC GTCTGATTCGATTGTGCATGGTCAAAGACGAGCGCCATTTTGATAAGTTTGATCGTGCCATGGCGGATTATTTCGAAGGC GTCGATAGTCTAGACATGGATGAGCTGTTGGCCAAGCTAACAGATGTGCCCAAAGAATGGCTCGATTTAAAGCTCGATCC AAAGAACCTGACCGATGAGCAGAGACGTCTGCTAGAAAAGTACGGCTCGCTTGAGGAGTTGATGAAGGCGTTGGAAGAGC GGTTAAAAGAGCAAAAAGAGCGTCATGAAGGTGGTAGTAAATGGGTAGGGACGGGCGGCACTTCGCCATTTGGTGCTTAT GGTGACCATCCTGAGGGCGTGCGTGTCGGCGGTGAGTCACGCAAACGTAGCGCTGCCAAAGTCTGGGAGCAGCGTAAATA TCGTAATCTCGATGACGATAATCAGCTCGGTACTCGTCAAATTCAAATGGCGCTACGCAATCTGCGCCAGTTTGCACGGA CCGGTAGTGCTGATGAGCTCGATATTCATGAGACAATTAAGCGCACGGCAAAAAAGGGTGTGCTCGATATACATATGCAA GCAGAGCGCCGTAACCGTGTCAAAGTACTGATGTTATTTGATGTGGGCGGCAGTATGGATGTTCATGTCGAAGCGCTTGA AAAACTGTTTTCTGCGGCGAAAAATGAATTTAAAACCTTAGAGTTTTTTTACTTTCATAACTGTCTATATGATTATGTCT GGAAGGATAATAACCGTCGCCATAGCGCGCCTATGCCAACCTTTGAATTGCTTAATAAGTATGGCCGAGAGTATCGTGTT ATCTTCGTGGGTGATGCGTCGATGTCACCGTATGAGCTGATGACGGTAGGCGGTAGCGTTGAATATATGAATAATGAAGC AGGCATTGTCTGGTTAAAGAGGGTGCTCGCGCACTTTGATAAAGTCGCTTGGCTCAATCCTGAGAATCCAACCTATTGGC AATATACCCAAACTATCGTTGAGATTAAAAAACTGTTTGATAATAAGATGTATCCAATGACGTTACATGGCGTGGAAGAT ATGACCAATTATATGGCGCGCTAA
Upstream 100 bases:
>100_bases TATCAAAGTCAATGCAAGCGCTTAGCCTATGACTGTATCAATTAATGATATCAGCAATATCACCAGATAATAATGTCAGC CAATAAGTGATACGACTCTT
Downstream 100 bases:
>100_bases TATTATATTAGCTTTAGAGTAATTGAATGTTAGCTTTGCAGTCAGTTTTTATATGACATAAATCAGACTAAAAAAACAGC TTCTATTATTTAATAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MFIKLFYTLRTYGVPVSTRELLDLNAALEQGLMMQPHPEDPALTTFASREDMYRLIRLCMVKDERHFDKFDRAMADYFEG VDSLDMDELLAKLTDVPKEWLDLKLDPKNLTDEQRRLLEKYGSLEELMKALEERLKEQKERHEGGSKWVGTGGTSPFGAY GDHPEGVRVGGESRKRSAAKVWEQRKYRNLDDDNQLGTRQIQMALRNLRQFARTGSADELDIHETIKRTAKKGVLDIHMQ AERRNRVKVLMLFDVGGSMDVHVEALEKLFSAAKNEFKTLEFFYFHNCLYDYVWKDNNRRHSAPMPTFELLNKYGREYRV IFVGDASMSPYELMTVGGSVEYMNNEAGIVWLKRVLAHFDKVAWLNPENPTYWQYTQTIVEIKKLFDNKMYPMTLHGVED MTNYMAR
Sequences:
>Translated_407_residues MFIKLFYTLRTYGVPVSTRELLDLNAALEQGLMMQPHPEDPALTTFASREDMYRLIRLCMVKDERHFDKFDRAMADYFEG VDSLDMDELLAKLTDVPKEWLDLKLDPKNLTDEQRRLLEKYGSLEELMKALEERLKEQKERHEGGSKWVGTGGTSPFGAY GDHPEGVRVGGESRKRSAAKVWEQRKYRNLDDDNQLGTRQIQMALRNLRQFARTGSADELDIHETIKRTAKKGVLDIHMQ AERRNRVKVLMLFDVGGSMDVHVEALEKLFSAAKNEFKTLEFFYFHNCLYDYVWKDNNRRHSAPMPTFELLNKYGREYRV IFVGDASMSPYELMTVGGSVEYMNNEAGIVWLKRVLAHFDKVAWLNPENPTYWQYTQTIVEIKKLFDNKMYPMTLHGVED MTNYMAR >Mature_407_residues MFIKLFYTLRTYGVPVSTRELLDLNAALEQGLMMQPHPEDPALTTFASREDMYRLIRLCMVKDERHFDKFDRAMADYFEG VDSLDMDELLAKLTDVPKEWLDLKLDPKNLTDEQRRLLEKYGSLEELMKALEERLKEQKERHEGGSKWVGTGGTSPFGAY GDHPEGVRVGGESRKRSAAKVWEQRKYRNLDDDNQLGTRQIQMALRNLRQFARTGSADELDIHETIKRTAKKGVLDIHMQ AERRNRVKVLMLFDVGGSMDVHVEALEKLFSAAKNEFKTLEFFYFHNCLYDYVWKDNNRRHSAPMPTFELLNKYGREYRV IFVGDASMSPYELMTVGGSVEYMNNEAGIVWLKRVLAHFDKVAWLNPENPTYWQYTQTIVEIKKLFDNKMYPMTLHGVED MTNYMAR
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47565; Mature: 47565
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIKLFYTLRTYGVPVSTRELLDLNAALEQGLMMQPHPEDPALTTFASREDMYRLIRLCM CEEEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VKDERHFDKFDRAMADYFEGVDSLDMDELLAKLTDVPKEWLDLKLDPKNLTDEQRRLLEK HCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCEECCCCCCHHHHHHHHH YGSLEELMKALEERLKEQKERHEGGSKWVGTGGTSPFGAYGDHPEGVRVGGESRKRSAAK HCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHH VWEQRKYRNLDDDNQLGTRQIQMALRNLRQFARTGSADELDIHETIKRTAKKGVLDIHMQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEE AERRNRVKVLMLFDVGGSMDVHVEALEKLFSAAKNEFKTLEFFYFHNCLYDYVWKDNNRR CCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HSAPMPTFELLNKYGREYRVIFVGDASMSPYELMTVGGSVEYMNNEAGIVWLKRVLAHFD CCCCCCHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHH KVAWLNPENPTYWQYTQTIVEIKKLFDNKMYPMTLHGVEDMTNYMAR HEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCC >Mature Secondary Structure MFIKLFYTLRTYGVPVSTRELLDLNAALEQGLMMQPHPEDPALTTFASREDMYRLIRLCM CEEEEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VKDERHFDKFDRAMADYFEGVDSLDMDELLAKLTDVPKEWLDLKLDPKNLTDEQRRLLEK HCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCEECCCCCCHHHHHHHHH YGSLEELMKALEERLKEQKERHEGGSKWVGTGGTSPFGAYGDHPEGVRVGGESRKRSAAK HCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHH VWEQRKYRNLDDDNQLGTRQIQMALRNLRQFARTGSADELDIHETIKRTAKKGVLDIHMQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEE AERRNRVKVLMLFDVGGSMDVHVEALEKLFSAAKNEFKTLEFFYFHNCLYDYVWKDNNRR CCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HSAPMPTFELLNKYGREYRVIFVGDASMSPYELMTVGGSVEYMNNEAGIVWLKRVLAHFD CCCCCCHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHH KVAWLNPENPTYWQYTQTIVEIKKLFDNKMYPMTLHGVEDMTNYMAR HEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA