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The map label for this gene is ycgA [H]

Identifier: 93005596

GI number: 93005596

Start: 902083

End: 903516

Strand: Reverse

Name: ycgA [H]

Synonym: Pcryo_0766

Alternate gene names: 93005596

Gene position: 903516-902083 (Counterclockwise)

Preceding gene: 93005597

Following gene: 93005592

Centisome position: 29.53

GC content: 41.98

Gene sequence:

>1434_bases
ATGTCAGACAATGAAATTGATAATGTAGAGTTAGTAAGCAGGCAGAAAAAAAAATTCGAGATGCCGCATATTTATGTCAT
CTTATTTGTGTTTAGTGCCATTGCAGCTATCCTTACACACTTTGTACCTTCCGGTAAATATGATCGTGTCCTTGGGCCAG
AAGGTAGAACCACCATTGATGCCACGTCCTACCATCTCATAGAACAAACTCCAGTTGGCGTCACCGATTTTTTAACTGCT
GTGCCTAGAGGTCTTATCGATGCAGGTGAAGTTGTGTTCTTCACATTCATTATCGGTGGTATGTTCATGGTACTCAGAAG
AACAGGAATTATCGAAGTAGCTGTTGATAAATTAGCACGAAAATTTGCAAATAACGGCTTACTATTAATAGCAGTATTGA
CAACAACCTTTGCTTTTATTGCCACACTAATTGGTACACCGGAATTATCATTAGTTTACATCCCAGTCATTATGCCCTTA
ATCATTGCCTTAGGATATGACTCGATAACGGCTGCTGCCATTGCCTTATGTGGGACCGGGGCTGGTTTTAGTGCTGGTGT
ACTTAATCCAATTAATACGGGGCTGGGACAAAAATTATCCGGACTACCAGTATTCTCAGGAATGGGCTTACGTTCAATCG
TATTTGTTCTAGCAGTTACTACCGTTATTTTCTTTGTTATAAGATATGCAAAGAAAGTTAAGAACAATCCATCCAAAAGT
TATGTCTATGAAGAGGACAGTGAAAAGAGAATAGAGTTTAATCAAATTGTCGGCGGTACTGCTCTTACTATGTCACCTCG
TCAAAAGCTAGCTGCCTATGCAATGCTTATTCTATCTGCAGTACTAGTATACGGAGTACTTAAGCAAGGCTGGTTCATGG
TAGAGATGTCCGGACTATTTGTCATCATGGGCATTGTAGTTGGAATGATAGCGGGTCTTAAGCTTACTGAGATATGCGAT
GGGTTTAACCAAGGCTTTAAAGATGTATTGATGGGAGCGTTTATCGTCGGTTTAGCTCGTGCAGTTGCTGTAGTCTTAGA
AGATGGCAACGTCATGGACACACTTGTACACTCTTTAGGGCTACTAGTTGGAGACCTACCTCCTGAATTGGCAGCTGTTG
GCATGTACTTTGTTCAAACAGCAATCAACTTCGTGATCTCTTCTGGTAGTGGACAGGCTCTTGTTACGATGCCTATCATG
GCACCACTCGCTGATCTCGTTGGAGTAACCAGACAAACCGCCGTTCTAGCCTATCAACTTGGCGATGGCTTTACCCATGT
TCTTTTCCCTACCAGTGGTTATTTTATGGCAGCACTAGTTATTGCTGGGGTACCCTATCAAAAATGGTTACGCTTTTTCT
TACCTATTTTTGCAGTTTGGGCTATGATTGCCATTGGCTCGCTAATCGTTGCGCAACTGATTGGGTGGTCGTAA

Upstream 100 bases:

>100_bases
GCAGGATTAGCACCAAGATGAGCACTTTCTATAATACTATTTTGTTTACAACAGACAGGTAAGTCATATTCTCTAAAACG
GATTATTTGGAGTTAATAAA

Downstream 100 bases:

>100_bases
CTGATAATCAAATAGTATTATTTACAAATAAGAGGGGTAGATGTTTATGATATCTACCCCTCTTATTTATATTTAAGGAT
TACAATCCAAGCACTTGTTT

Product: C4-dicarboxylate anaerobic carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MSDNEIDNVELVSRQKKKFEMPHIYVILFVFSAIAAILTHFVPSGKYDRVLGPEGRTTIDATSYHLIEQTPVGVTDFLTA
VPRGLIDAGEVVFFTFIIGGMFMVLRRTGIIEVAVDKLARKFANNGLLLIAVLTTTFAFIATLIGTPELSLVYIPVIMPL
IIALGYDSITAAAIALCGTGAGFSAGVLNPINTGLGQKLSGLPVFSGMGLRSIVFVLAVTTVIFFVIRYAKKVKNNPSKS
YVYEEDSEKRIEFNQIVGGTALTMSPRQKLAAYAMLILSAVLVYGVLKQGWFMVEMSGLFVIMGIVVGMIAGLKLTEICD
GFNQGFKDVLMGAFIVGLARAVAVVLEDGNVMDTLVHSLGLLVGDLPPELAAVGMYFVQTAINFVISSGSGQALVTMPIM
APLADLVGVTRQTAVLAYQLGDGFTHVLFPTSGYFMAALVIAGVPYQKWLRFFLPIFAVWAMIAIGSLIVAQLIGWS

Sequences:

>Translated_477_residues
MSDNEIDNVELVSRQKKKFEMPHIYVILFVFSAIAAILTHFVPSGKYDRVLGPEGRTTIDATSYHLIEQTPVGVTDFLTA
VPRGLIDAGEVVFFTFIIGGMFMVLRRTGIIEVAVDKLARKFANNGLLLIAVLTTTFAFIATLIGTPELSLVYIPVIMPL
IIALGYDSITAAAIALCGTGAGFSAGVLNPINTGLGQKLSGLPVFSGMGLRSIVFVLAVTTVIFFVIRYAKKVKNNPSKS
YVYEEDSEKRIEFNQIVGGTALTMSPRQKLAAYAMLILSAVLVYGVLKQGWFMVEMSGLFVIMGIVVGMIAGLKLTEICD
GFNQGFKDVLMGAFIVGLARAVAVVLEDGNVMDTLVHSLGLLVGDLPPELAAVGMYFVQTAINFVISSGSGQALVTMPIM
APLADLVGVTRQTAVLAYQLGDGFTHVLFPTSGYFMAALVIAGVPYQKWLRFFLPIFAVWAMIAIGSLIVAQLIGWS
>Mature_476_residues
SDNEIDNVELVSRQKKKFEMPHIYVILFVFSAIAAILTHFVPSGKYDRVLGPEGRTTIDATSYHLIEQTPVGVTDFLTAV
PRGLIDAGEVVFFTFIIGGMFMVLRRTGIIEVAVDKLARKFANNGLLLIAVLTTTFAFIATLIGTPELSLVYIPVIMPLI
IALGYDSITAAAIALCGTGAGFSAGVLNPINTGLGQKLSGLPVFSGMGLRSIVFVLAVTTVIFFVIRYAKKVKNNPSKSY
VYEEDSEKRIEFNQIVGGTALTMSPRQKLAAYAMLILSAVLVYGVLKQGWFMVEMSGLFVIMGIVVGMIAGLKLTEICDG
FNQGFKDVLMGAFIVGLARAVAVVLEDGNVMDTLVHSLGLLVGDLPPELAAVGMYFVQTAINFVISSGSGQALVTMPIMA
PLADLVGVTRQTAVLAYQLGDGFTHVLFPTSGYFMAALVIAGVPYQKWLRFFLPIFAVWAMIAIGSLIVAQLIGWS

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=508, Percent_Identity=31.2992125984252, Blast_Score=235, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51281; Mature: 51149

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNEIDNVELVSRQKKKFEMPHIYVILFVFSAIAAILTHFVPSGKYDRVLGPEGRTTID
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEC
ATSYHLIEQTPVGVTDFLTAVPRGLIDAGEVVFFTFIIGGMFMVLRRTGIIEVAVDKLAR
CCCEEEHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KFANNGLLLIAVLTTTFAFIATLIGTPELSLVYIPVIMPLIIALGYDSITAAAIALCGTG
HHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
AGFSAGVLNPINTGLGQKLSGLPVFSGMGLRSIVFVLAVTTVIFFVIRYAKKVKNNPSKS
CCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YVYEEDSEKRIEFNQIVGGTALTMSPRQKLAAYAMLILSAVLVYGVLKQGWFMVEMSGLF
CCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHH
VIMGIVVGMIAGLKLTEICDGFNQGFKDVLMGAFIVGLARAVAVVLEDGNVMDTLVHSLG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLVGDLPPELAAVGMYFVQTAINFVISSGSGQALVTMPIMAPLADLVGVTRQTAVLAYQL
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEC
GDGFTHVLFPTSGYFMAALVIAGVPYQKWLRFFLPIFAVWAMIAIGSLIVAQLIGWS
CCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDNEIDNVELVSRQKKKFEMPHIYVILFVFSAIAAILTHFVPSGKYDRVLGPEGRTTID
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEC
ATSYHLIEQTPVGVTDFLTAVPRGLIDAGEVVFFTFIIGGMFMVLRRTGIIEVAVDKLAR
CCCEEEHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KFANNGLLLIAVLTTTFAFIATLIGTPELSLVYIPVIMPLIIALGYDSITAAAIALCGTG
HHCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
AGFSAGVLNPINTGLGQKLSGLPVFSGMGLRSIVFVLAVTTVIFFVIRYAKKVKNNPSKS
CCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YVYEEDSEKRIEFNQIVGGTALTMSPRQKLAAYAMLILSAVLVYGVLKQGWFMVEMSGLF
CCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHH
VIMGIVVGMIAGLKLTEICDGFNQGFKDVLMGAFIVGLARAVAVVLEDGNVMDTLVHSLG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLVGDLPPELAAVGMYFVQTAINFVISSGSGQALVTMPIMAPLADLVGVTRQTAVLAYQL
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHEEEEC
GDGFTHVLFPTSGYFMAALVIAGVPYQKWLRFFLPIFAVWAMIAIGSLIVAQLIGWS
CCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]