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The map label for this gene is ruvC [H]

Identifier: 93005501

GI number: 93005501

Start: 794723

End: 795307

Strand: Reverse

Name: ruvC [H]

Synonym: Pcryo_0671

Alternate gene names: 93005501

Gene position: 795307-794723 (Counterclockwise)

Preceding gene: 93005505

Following gene: 93005494

Centisome position: 25.99

GC content: 45.81

Gene sequence:

>585_bases
ATGGCAATTATTATTGGGATTGATCCAGGTTCACGCATGACCGGCTATGGCATCCTTCAACAAACGGGCGATAAGCTCAC
CTATATTGATTCAGGCACCATTCGTACAGATACCAAAGAGATGCCTGAACGCCTAAAACGTATTTTTAATGGCTTGACGC
GTATTACTCAGCATCATCTAAAATATGCAGATGAGCCTATTTATACGGCAATTGAACAAGTATTTATGGCAGAAAACCCT
GATTCAGCGCTTAAGCTTGGGCAAGCACGTGGCGCAGCCATTGCAGCGATGGTAGCCCTGGATTTGGAAGTTTCAGAATA
TACTGCACGCCAAATCAAACAAGCCGTTTGCGGCTATGGCGCAGCAGCAAAAGAGCAAGTACAAGAAATGGTGTGCCGGA
TACTGACTCTGGATTTTGTACCACAACAAGATGCGGCAGACGGTCTTGCCTGCGCCATCTGTCATGCACACTCAAGCCAT
TCAATGAACAAATTGATATTAAATAGTGCCATGCGCGGGCGCGGTGCGTCTAAGAAAAAAGGTCGCTGGCGCTTAACTGA
AGAAGATTTAGGCAATTTGCGTTAA

Upstream 100 bases:

>100_bases
AATGGCTAACATATGATGTATATGGGGATTGATTGCTATACTATCAAACTTACGGCTAATTTTTAAGCCATAAAACAAAA
TGTAAGTAAGACGGAACACT

Downstream 100 bases:

>100_bases
AACAAGCAATTAAGCAATTAAGCAATTAAGCAATTAAGCAATTAAGCAATTAAGCAATTAAGCAATTAAGCAATTAAGCA
ATTAAGCAATTAAGCATAAA

Product: Holliday junction resolvase

Products: NA

Alternate protein names: Holliday junction nuclease ruvC; Holliday junction resolvase ruvC [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAIIIGIDPGSRMTGYGILQQTGDKLTYIDSGTIRTDTKEMPERLKRIFNGLTRITQHHLKYADEPIYTAIEQVFMAENP
DSALKLGQARGAAIAAMVALDLEVSEYTARQIKQAVCGYGAAAKEQVQEMVCRILTLDFVPQQDAADGLACAICHAHSSH
SMNKLILNSAMRGRGASKKKGRWRLTEEDLGNLR

Sequences:

>Translated_194_residues
MAIIIGIDPGSRMTGYGILQQTGDKLTYIDSGTIRTDTKEMPERLKRIFNGLTRITQHHLKYADEPIYTAIEQVFMAENP
DSALKLGQARGAAIAAMVALDLEVSEYTARQIKQAVCGYGAAAKEQVQEMVCRILTLDFVPQQDAADGLACAICHAHSSH
SMNKLILNSAMRGRGASKKKGRWRLTEEDLGNLR
>Mature_193_residues
AIIIGIDPGSRMTGYGILQQTGDKLTYIDSGTIRTDTKEMPERLKRIFNGLTRITQHHLKYADEPIYTAIEQVFMAENPD
SALKLGQARGAAIAAMVALDLEVSEYTARQIKQAVCGYGAAAKEQVQEMVCRILTLDFVPQQDAADGLACAICHAHSSHS
MNKLILNSAMRGRGASKKKGRWRLTEEDLGNLR

Specific function: Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leav

COG id: COG0817

COG function: function code L; Holliday junction resolvasome, endonuclease subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvC family [H]

Homologues:

Organism=Escherichia coli, GI1788170, Length=177, Percent_Identity=55.9322033898305, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR020563
- InterPro:   IPR002176 [H]

Pfam domain/function: PF02075 RuvC [H]

EC number: =3.1.22.4 [H]

Molecular weight: Translated: 21338; Mature: 21207

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIIGIDPGSRMTGYGILQQTGDKLTYIDSGTIRTDTKEMPERLKRIFNGLTRITQHHL
CEEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KYADEPIYTAIEQVFMAENPDSALKLGQARGAAIAAMVALDLEVSEYTARQIKQAVCGYG
HHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
AAAKEQVQEMVCRILTLDFVPQQDAADGLACAICHAHSSHSMNKLILNSAMRGRGASKKK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
GRWRLTEEDLGNLR
CCEEECHHHCCCCC
>Mature Secondary Structure 
AIIIGIDPGSRMTGYGILQQTGDKLTYIDSGTIRTDTKEMPERLKRIFNGLTRITQHHL
EEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KYADEPIYTAIEQVFMAENPDSALKLGQARGAAIAAMVALDLEVSEYTARQIKQAVCGYG
HHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
AAAKEQVQEMVCRILTLDFVPQQDAADGLACAICHAHSSHSMNKLILNSAMRGRGASKKK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
GRWRLTEEDLGNLR
CCEEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA