| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is prs [H]
Identifier: 93005016
GI number: 93005016
Start: 215617
End: 216564
Strand: Reverse
Name: prs [H]
Synonym: Pcryo_0185
Alternate gene names: 93005016
Gene position: 216564-215617 (Counterclockwise)
Preceding gene: 93005017
Following gene: 93005015
Centisome position: 7.08
GC content: 47.26
Gene sequence:
>948_bases ATGCCTTATTTGGCGATTTTTACGGGCAATGCCCACCCAGAATTAGCAAAAACCGTAGCCGATCATCTCCATATACCTCT TGGTAAAGCTGACATCACGCGTTTTTCTGATGGCGAAATTGCCGTAGAAATCAAAGAGCACGTGCGTGGTAAAGACGTGT TTATCATGCAGCCTACTTGTGCACCGACCAACGACAATTTGATGGAAATCATGATGATGGCAGACGCTTTGCGTCGCTCT AGTGCTGGTCGTATTACAGCAGTCATGCCGTATTTTGGTTATGCCCGTCAAGACCGTCGCCCTCGTTCAGCTCGTGTGCC TATCTCTGCTAAAGTCGTTGCTGACATGTTGAACATCGTTAGTATCGATCGTGTGATGACCGTTGATTTGCACTCAGATC AGATTCAAGGTTTCTTTGACATCCCAGTCGATAATATCTACGGCACGCCTGTATTGCTTAACGATCTACAAAAACAAGAT TATGACAACATCATGGTTGTCTCTCCTGACGTTGGGGGCGTGGTTCGTGCACGTGCGATGGCTAAGCAGTTGGGCGATAC TGACATGGCGATTATTGATAAACGTCGTGCCCGTGCCAATGAGTCGCAAGTGATGCACATTATTGGTGACGTCCGTGACC GTGATTGTGTCATCGTTGATGATATGGTCGATACGGCTGGCACGCTATGTAAAGCTGCCGAAGCGCTTAAAGCAAATGGC GCACGCCGCGTAGTGGCTTATATCACCCACCCTGTCCTATCTGGTAATGCGCTTAAGAACATCAGTGAATCAGAATTGGA TGAGATTGTCGTTACTGATACGATTCCATTGTCTGATGCTGCCAAAGCTTGCAGCAAGATTCGTCAAGTGAGCATCGCGC CAATGTTGGCTGAAAGCTTACGCCGTATTAATAACGAAGAATCTATCAGCGCCATGTTTGACGCTTAA
Upstream 100 bases:
>100_bases TAATAGTAGTCATCAATCTTTTTCACCACTCTTTTCTGAATTTGAGCAGTTTGACACTGCTTAGCGGTCGCTGCTTGAGT CAATCAATAGGACTTCTGTC
Downstream 100 bases:
>100_bases GAGTTATCGTAGATTGAAAAAAGCGCTAAGTTTCATTACTTGGCGCTTTTTTTATTTAATGATTTTAATTAACAGTTTTG CACTGTTGTTCGTATAGGTG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPYLAIFTGNAHPELAKTVADHLHIPLGKADITRFSDGEIAVEIKEHVRGKDVFIMQPTCAPTNDNLMEIMMMADALRRS SAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIVSIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLNDLQKQD YDNIMVVSPDVGGVVRARAMAKQLGDTDMAIIDKRRARANESQVMHIIGDVRDRDCVIVDDMVDTAGTLCKAAEALKANG ARRVVAYITHPVLSGNALKNISESELDEIVVTDTIPLSDAAKACSKIRQVSIAPMLAESLRRINNEESISAMFDA
Sequences:
>Translated_315_residues MPYLAIFTGNAHPELAKTVADHLHIPLGKADITRFSDGEIAVEIKEHVRGKDVFIMQPTCAPTNDNLMEIMMMADALRRS SAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIVSIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLNDLQKQD YDNIMVVSPDVGGVVRARAMAKQLGDTDMAIIDKRRARANESQVMHIIGDVRDRDCVIVDDMVDTAGTLCKAAEALKANG ARRVVAYITHPVLSGNALKNISESELDEIVVTDTIPLSDAAKACSKIRQVSIAPMLAESLRRINNEESISAMFDA >Mature_314_residues PYLAIFTGNAHPELAKTVADHLHIPLGKADITRFSDGEIAVEIKEHVRGKDVFIMQPTCAPTNDNLMEIMMMADALRRSS AGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIVSIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLNDLQKQDY DNIMVVSPDVGGVVRARAMAKQLGDTDMAIIDKRRARANESQVMHIIGDVRDRDCVIVDDMVDTAGTLCKAAEALKANGA RRVVAYITHPVLSGNALKNISESELDEIVVTDTIPLSDAAKACSKIRQVSIAPMLAESLRRINNEESISAMFDA
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=315, Percent_Identity=47.6190476190476, Blast_Score=308, Evalue=6e-84, Organism=Homo sapiens, GI4506129, Length=315, Percent_Identity=46.3492063492063, Blast_Score=305, Evalue=3e-83, Organism=Homo sapiens, GI84875539, Length=317, Percent_Identity=45.7413249211356, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI28557709, Length=315, Percent_Identity=47.3015873015873, Blast_Score=302, Evalue=2e-82, Organism=Homo sapiens, GI4506133, Length=345, Percent_Identity=34.4927536231884, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI194018537, Length=342, Percent_Identity=35.0877192982456, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI310128524, Length=148, Percent_Identity=28.3783783783784, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310115209, Length=148, Percent_Identity=28.3783783783784, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310118259, Length=148, Percent_Identity=28.3783783783784, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310119946, Length=148, Percent_Identity=28.3783783783784, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1787458, Length=314, Percent_Identity=67.8343949044586, Blast_Score=454, Evalue=1e-129, Organism=Caenorhabditis elegans, GI25149168, Length=315, Percent_Identity=43.8095238095238, Blast_Score=289, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17554702, Length=315, Percent_Identity=43.8095238095238, Blast_Score=288, Evalue=3e-78, Organism=Caenorhabditis elegans, GI71989924, Length=315, Percent_Identity=43.8095238095238, Blast_Score=286, Evalue=8e-78, Organism=Caenorhabditis elegans, GI17554704, Length=310, Percent_Identity=43.8709677419355, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=34.0236686390533, Blast_Score=198, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6321776, Length=312, Percent_Identity=45.8333333333333, Blast_Score=276, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6319403, Length=315, Percent_Identity=43.8095238095238, Blast_Score=266, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6320946, Length=313, Percent_Identity=42.8115015974441, Blast_Score=266, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=207, Percent_Identity=38.6473429951691, Blast_Score=146, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6324511, Length=112, Percent_Identity=39.2857142857143, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355239, Length=315, Percent_Identity=45.0793650793651, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI45551540, Length=337, Percent_Identity=42.1364985163205, Blast_Score=279, Evalue=2e-75, Organism=Drosophila melanogaster, GI24651458, Length=354, Percent_Identity=35.3107344632768, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI24651456, Length=354, Percent_Identity=35.3107344632768, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI281362873, Length=354, Percent_Identity=35.3107344632768, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24651454, Length=354, Percent_Identity=35.3107344632768, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24651462, Length=373, Percent_Identity=33.7801608579088, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24651464, Length=373, Percent_Identity=33.7801608579088, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI45552010, Length=373, Percent_Identity=32.7077747989276, Blast_Score=196, Evalue=2e-50,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34589; Mature: 34458
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYLAIFTGNAHPELAKTVADHLHIPLGKADITRFSDGEIAVEIKEHVRGKDVFIMQPTC CCEEEEEECCCCHHHHHHHHHHHCCCCCCHHCCEECCCCEEEEEHHHCCCCEEEEECCCC APTNDNLMEIMMMADALRRSSAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIV CCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHCCHHHCCCCCCCCCCCHHHHHHHHHHHH SIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLNDLQKQDYDNIMVVSPDVGGVVRARAM HHCCEEEEEECHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH AKQLGDTDMAIIDKRRARANESQVMHIIGDVRDRDCVIVDDMVDTAGTLCKAAEALKANG HHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCC ARRVVAYITHPVLSGNALKNISESELDEIVVTDTIPLSDAAKACSKIRQVSIAPMLAESL CCEEEEEECCCCCCCHHHHCCCHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH RRINNEESISAMFDA HHCCCCHHHHHCCCC >Mature Secondary Structure PYLAIFTGNAHPELAKTVADHLHIPLGKADITRFSDGEIAVEIKEHVRGKDVFIMQPTC CEEEEEECCCCHHHHHHHHHHHCCCCCCHHCCEECCCCEEEEEHHHCCCCEEEEECCCC APTNDNLMEIMMMADALRRSSAGRITAVMPYFGYARQDRRPRSARVPISAKVVADMLNIV CCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHCCHHHCCCCCCCCCCCHHHHHHHHHHHH SIDRVMTVDLHSDQIQGFFDIPVDNIYGTPVLLNDLQKQDYDNIMVVSPDVGGVVRARAM HHCCEEEEEECHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH AKQLGDTDMAIIDKRRARANESQVMHIIGDVRDRDCVIVDDMVDTAGTLCKAAEALKANG HHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCC ARRVVAYITHPVLSGNALKNISESELDEIVVTDTIPLSDAAKACSKIRQVSIAPMLAESL CCEEEEEECCCCCCCHHHHCCCHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH RRINNEESISAMFDA HHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]