| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is yheT [H]
Identifier: 93004860
GI number: 93004860
Start: 35604
End: 36656
Strand: Reverse
Name: yheT [H]
Synonym: Pcryo_0029
Alternate gene names: 93004860
Gene position: 36656-35604 (Counterclockwise)
Preceding gene: 93004861
Following gene: 93004859
Centisome position: 1.2
GC content: 44.25
Gene sequence:
>1053_bases ATGCCAACCTCAAAGTCGACAAAACCATTCGCACCTGCCCCTTTTAAACCGCCGTTTTGGCTCACCAATCCGCACTTGCA AAGTATTTTACCGAAGTTTTTTGCGCCAAAAACACCGAATTACCGACGCGTGATTAAACAAGACTCACTTTGCGAAACTG ATATCGCTTATGACTTTTATGATGCTCATCCTGTCCAAGATTTAGAAAATGGCAAACTTGAACAAACACCATTAATCGTA CTTTTTCATGGGATGGAAGGCAGCAGTGACAGTCATTATGCGCGTGCCTTGGCATATCAGATGCATGCGCAAGGCTGGCA TTTTGTCGTCGCTCACTTTCGCAGTTGCGGTGGTATTCCCGCTAATGGCAAAGTGTTTTATAACGCTGGTGACACGGGCG AGGTGCATCATATGTTAGAGAACTTGCATGAGAATTACGCCCATATCTATGGGGTTGGCGTGTCACTTGGCGGTAATGCC TTGGCAAAGTATATGGGTGAATATGGTGATGAGGCGCTATGCGACGGCGCAGCGGTAATATCTGCGCCAGTTGATATGTC ATCGGCTGCTATTACGATGCATAGCTTTTTGAGTCATCGTATCTATACCCCTTATTTACTCAATCCGATTATCAAAAAAG CCTTAGCAAATGAAATTACCGCAGACGAGATTGCTTCTATCAAAGCGGTAAAACGCATTAGCGATTTTGATAATATCTTC ACTGCGCCTAGGCATGGTTACCGCTCTAATAATGATTACTACCGCTCCTCCTCTGCCCTACCTCACTTAAGGAATGTCAC ACGCCCGCTGTTGCTTATTAGCGCCAAAGACGATCCCTTTATTGGCTTTACTGCCACGCCCAATGATGTCTCAGACAGTG TCACCATATTAGATACGGCACACGGGGGTCATATCGGCTATTTGCGTTATCGTACAAGCAATAGCAATGTAAAAACTCCA AGTAAAAAATCAAAGTTTGACATCAACTGGATACCTGAAACCGTGAGTGCCTACTTTAATCATATTGGCGTGCCATCTAA TAAAATTAGATAA
Upstream 100 bases:
>100_bases GCGTTCACTGAAAACCATTGGTTTTGACGACGACCTTGGATATGATAAGGCACTGATTTTCAAAGACGATTTTTTAACAA ACATAAAATAAGACTGAAAT
Downstream 100 bases:
>100_bases ATTATAAAATAAAAAACATCGTTTTTATCTTTAAATATTTTGAGACTGCTTTATGTATCCATTTATCCGTTACGCCAGCA CCATCGCCCATGCCGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPTSKSTKPFAPAPFKPPFWLTNPHLQSILPKFFAPKTPNYRRVIKQDSLCETDIAYDFYDAHPVQDLENGKLEQTPLIV LFHGMEGSSDSHYARALAYQMHAQGWHFVVAHFRSCGGIPANGKVFYNAGDTGEVHHMLENLHENYAHIYGVGVSLGGNA LAKYMGEYGDEALCDGAAVISAPVDMSSAAITMHSFLSHRIYTPYLLNPIIKKALANEITADEIASIKAVKRISDFDNIF TAPRHGYRSNNDYYRSSSALPHLRNVTRPLLLISAKDDPFIGFTATPNDVSDSVTILDTAHGGHIGYLRYRTSNSNVKTP SKKSKFDINWIPETVSAYFNHIGVPSNKIR
Sequences:
>Translated_350_residues MPTSKSTKPFAPAPFKPPFWLTNPHLQSILPKFFAPKTPNYRRVIKQDSLCETDIAYDFYDAHPVQDLENGKLEQTPLIV LFHGMEGSSDSHYARALAYQMHAQGWHFVVAHFRSCGGIPANGKVFYNAGDTGEVHHMLENLHENYAHIYGVGVSLGGNA LAKYMGEYGDEALCDGAAVISAPVDMSSAAITMHSFLSHRIYTPYLLNPIIKKALANEITADEIASIKAVKRISDFDNIF TAPRHGYRSNNDYYRSSSALPHLRNVTRPLLLISAKDDPFIGFTATPNDVSDSVTILDTAHGGHIGYLRYRTSNSNVKTP SKKSKFDINWIPETVSAYFNHIGVPSNKIR >Mature_349_residues PTSKSTKPFAPAPFKPPFWLTNPHLQSILPKFFAPKTPNYRRVIKQDSLCETDIAYDFYDAHPVQDLENGKLEQTPLIVL FHGMEGSSDSHYARALAYQMHAQGWHFVVAHFRSCGGIPANGKVFYNAGDTGEVHHMLENLHENYAHIYGVGVSLGGNAL AKYMGEYGDEALCDGAAVISAPVDMSSAAITMHSFLSHRIYTPYLLNPIIKKALANEITADEIASIKAVKRISDFDNIFT APRHGYRSNNDYYRSSSALPHLRNVTRPLLLISAKDDPFIGFTATPNDVSDSVTILDTAHGGHIGYLRYRTSNSNVKTPS KKSKFDINWIPETVSAYFNHIGVPSNKIR
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=315, Percent_Identity=25.0793650793651, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI194578891, Length=241, Percent_Identity=26.5560165975104, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI23397659, Length=289, Percent_Identity=24.2214532871972, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI23397661, Length=289, Percent_Identity=24.2214532871972, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI1789752, Length=309, Percent_Identity=35.2750809061489, Blast_Score=175, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71985405, Length=315, Percent_Identity=24.4444444444444, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17566110, Length=315, Percent_Identity=23.1746031746032, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71985413, Length=197, Percent_Identity=24.8730964467005, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323866, Length=250, Percent_Identity=24.4, Blast_Score=113, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6325162, Length=265, Percent_Identity=27.9245283018868, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6319655, Length=272, Percent_Identity=25.7352941176471, Blast_Score=102, Evalue=7e-23, Organism=Drosophila melanogaster, GI281398151, Length=321, Percent_Identity=28.6604361370716, Blast_Score=121, Evalue=9e-28, Organism=Drosophila melanogaster, GI24652003, Length=321, Percent_Identity=28.6604361370716, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24581365, Length=339, Percent_Identity=23.598820058997, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 38872; Mature: 38741
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSKSTKPFAPAPFKPPFWLTNPHLQSILPKFFAPKTPNYRRVIKQDSLCETDIAYDFY CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCEECC DAHPVQDLENGKLEQTPLIVLFHGMEGSSDSHYARALAYQMHAQGWHFVVAHFRSCGGIP CCCCCCHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC ANGKVFYNAGDTGEVHHMLENLHENYAHIYGVGVSLGGNALAKYMGEYGDEALCDGAAVI CCCEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHCCCHHHHCCCEEE SAPVDMSSAAITMHSFLSHRIYTPYLLNPIIKKALANEITADEIASIKAVKRISDFDNIF ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TAPRHGYRSNNDYYRSSSALPHLRNVTRPLLLISAKDDPFIGFTATPNDVSDSVTILDTA CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEC HGGHIGYLRYRTSNSNVKTPSKKSKFDINWIPETVSAYFNHIGVPSNKIR CCCEEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PTSKSTKPFAPAPFKPPFWLTNPHLQSILPKFFAPKTPNYRRVIKQDSLCETDIAYDFY CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHCCEECC DAHPVQDLENGKLEQTPLIVLFHGMEGSSDSHYARALAYQMHAQGWHFVVAHFRSCGGIP CCCCCCHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC ANGKVFYNAGDTGEVHHMLENLHENYAHIYGVGVSLGGNALAKYMGEYGDEALCDGAAVI CCCEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHHHCCCHHHHCCCEEE SAPVDMSSAAITMHSFLSHRIYTPYLLNPIIKKALANEITADEIASIKAVKRISDFDNIF ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH TAPRHGYRSNNDYYRSSSALPHLRNVTRPLLLISAKDDPFIGFTATPNDVSDSVTILDTA CCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEC HGGHIGYLRYRTSNSNVKTPSKKSKFDINWIPETVSAYFNHIGVPSNKIR CCCEEEEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]