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The map label for this gene is 93004859

Identifier: 93004859

GI number: 93004859

Start: 35009

End: 35551

Strand: Reverse

Name: 93004859

Synonym: Pcryo_0028

Alternate gene names: NA

Gene position: 35551-35009 (Counterclockwise)

Preceding gene: 93004860

Following gene: 93004858

Centisome position: 1.16

GC content: 50.28

Gene sequence:

>543_bases
ATGTATCCATTTATCCGTTACGCCAGCACCATCGCCCATGCCGCGCTGCAAGTGAAAAAAGGCAATACTTTAACGTTCAA
AGAAACCAGTGAGATTACCTTTCGCTGCCGTCTGACAGATATTGATAATTTCTTGGAAATGAATAATGGTCGCGTGCTGA
CCCTTTATGATATGGGGCGTACCGACTTTGCAGTACGGAGCGGGCTCGGCACTCAATTGCTTAGACAGCGTTGGGGCTTG
GTCGTGGCTGGTAGTACCATCCAATATCGCAAACGTATTCGTGCTTTTGAAAAAGTCACCATGAAGACCAAAATCGTCGG
CTTCGATGAGCGCTGGATATATATTGAGCAATCGATGTGGGTAAAAGGCAAGCCTTGCTCGTCGGCACTACTACGTACAG
GCGTCACCAAAGGCGGTAAGGTCATCGAGACGGCACGAGTACTGGCAGCCTTAGACCAATCGGATTGGCAGCTACCGCCG
AGCGGCTATGTGGCAGAATGGATTGTCAGTGATGCCGACCGTCCATGGCCGCCACAATCTTAG

Upstream 100 bases:

>100_bases
AGTGCCTACTTTAATCATATTGGCGTGCCATCTAATAAAATTAGATAAATTATAAAATAAAAAACATCGTTTTTATCTTT
AAATATTTTGAGACTGCTTT

Downstream 100 bases:

>100_bases
GTTTTGCTAGGCTTACCTCAAAATAAGGACTGATTATTTAACCATTTACATCGCAGTGCTTCGTCAAAATCCACTTGTCA
TGATCAATTTTTTCATAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Acyl-CoA Thioesterase; Thioesterase; Thioesterase Family Domain-Containing Protein

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MYPFIRYASTIAHAALQVKKGNTLTFKETSEITFRCRLTDIDNFLEMNNGRVLTLYDMGRTDFAVRSGLGTQLLRQRWGL
VVAGSTIQYRKRIRAFEKVTMKTKIVGFDERWIYIEQSMWVKGKPCSSALLRTGVTKGGKVIETARVLAALDQSDWQLPP
SGYVAEWIVSDADRPWPPQS

Sequences:

>Translated_180_residues
MYPFIRYASTIAHAALQVKKGNTLTFKETSEITFRCRLTDIDNFLEMNNGRVLTLYDMGRTDFAVRSGLGTQLLRQRWGL
VVAGSTIQYRKRIRAFEKVTMKTKIVGFDERWIYIEQSMWVKGKPCSSALLRTGVTKGGKVIETARVLAALDQSDWQLPP
SGYVAEWIVSDADRPWPPQS
>Mature_180_residues
MYPFIRYASTIAHAALQVKKGNTLTFKETSEITFRCRLTDIDNFLEMNNGRVLTLYDMGRTDFAVRSGLGTQLLRQRWGL
VVAGSTIQYRKRIRAFEKVTMKTKIVGFDERWIYIEQSMWVKGKPCSSALLRTGVTKGGKVIETARVLAALDQSDWQLPP
SGYVAEWIVSDADRPWPPQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20498; Mature: 20498

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPFIRYASTIAHAALQVKKGNTLTFKETSEITFRCRLTDIDNFLEMNNGRVLTLYDMGR
CCCHHHHHHHHHHHHEEEECCCEEEEEECCCEEEEEEECCCHHHHCCCCCEEEEEEECCC
TDFAVRSGLGTQLLRQRWGLVVAGSTIQYRKRIRAFEKVTMKTKIVGFDERWIYIEQSMW
CHHHHHCCCCHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCEE
VKGKPCSSALLRTGVTKGGKVIETARVLAALDQSDWQLPPSGYVAEWIVSDADRPWPPQS
ECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCCCCCC
>Mature Secondary Structure
MYPFIRYASTIAHAALQVKKGNTLTFKETSEITFRCRLTDIDNFLEMNNGRVLTLYDMGR
CCCHHHHHHHHHHHHEEEECCCEEEEEECCCEEEEEEECCCHHHHCCCCCEEEEEEECCC
TDFAVRSGLGTQLLRQRWGLVVAGSTIQYRKRIRAFEKVTMKTKIVGFDERWIYIEQSMW
CHHHHHCCCCHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCEE
VKGKPCSSALLRTGVTKGGKVIETARVLAALDQSDWQLPPSGYVAEWIVSDADRPWPPQS
ECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA