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The map label for this gene is yoeA [H]

Identifier: 93004853

GI number: 93004853

Start: 26771

End: 28345

Strand: Reverse

Name: yoeA [H]

Synonym: Pcryo_0022

Alternate gene names: 93004853

Gene position: 28345-26771 (Counterclockwise)

Preceding gene: 93004855

Following gene: 93004851

Centisome position: 0.93

GC content: 49.59

Gene sequence:

>1575_bases
TTGAGTAAAACAGATACCTCCATTGGTAAACGGCGTGACCTCACCCAAGGCTCGATCCCGAAAACCATGCTCTTATTTGC
ATTACCAACCCTTGGGTCATCTGCATTACAGTCATTAAACGGCTCGATCAATGCTGTCTGGGTGGGTCGATTTTTGGGTG
AGGAAGCGTTAGCAGCGACAGCCAACGGCAATATCTTGATGTTTATACTGATCTCCTTCGTGTTTGGTTTCGGTATGGCG
TCTACTATTTTGATTGGTCAGGCAATGGGCAGCCGTGACAACGCTATGGTTAAGAAAACCATGGGCACGGCGCTGGGCAG
CATTATTCCGATAAGCGTAATAGTGTCGGCAGTAGGGTGGATATTTGCGCCGATGCTGCTTGAGCTGCTTGGTACGCCGG
CAAGTGCTGTAGAGCTTGCCCTAACCTATCTGCGCATGATTTTTATTGCGATGCCTGTCACACTTACGTTTACGCTGATA
ATGATGGCACTGCGTGGGACGGGCGATTCGACGACGCCGCTTTGGTTTATCATTATATCGGTCGTGATTGACCTTATTTT
GACGCCGACACTGATTTTGGGTCTAGGACCATTTCCCGAGTGGGGCATATTTGGCTCGGCTTTTGCAACAGCCGTCGCAA
ATACGCTAGCGCTTATTGGCATGTTAGCCACTATGTATCTGCGTGGCTCTGTGCTGACGCTTAAGTTGCCGGAGCTTCGC
TTTTTGCGCGCAGACCGAGACATCCTGAAGTCGATGTTTTCAAAGGGTTTGCCGATGGGTCTACAGATGATTGTTATCTC
TTCGGCAGCATTAACAATGTTATCGCTGATTAATCGCGAAGGTGTGCAGACCACAGCCGCTTATAGCGCAACCCAGCAGC
TTTGGACCTACGTGCAGATGCCAGCAATGGCGCTAAGTGCTGCGGCCAGTGCGATGGTTGCACAGAACATCGGTGCCAAT
CAATGGCACCGAATCGCAGGGATCACACGCTGGGGACTGATTTTTAATCTGACATTGACCGGTTTTATTATCATACTGCT
AACCATTTTTGATGAGACCATTCTGGGCTTGTTCCTTGGCAGTGACAGTGAAGCGGTGCCGATTGGGCGTCATATTCAGC
TAATGGCGACATGGGGTTTTATCTTTTTTGGGATAGCACAGGTTTTGTTTGGCACCATGCGTGCAAACGGTTATGTGATT
TGGCCGCTGATTGTCATGGTCATTTCGATGTATCCAGTACGTCTTGGATTTGCTTTCGGGCTTTATCCTCTACTTGGAAC
CGATGCCCTTTGGCTATCCTTTCCAGCAGGCATGGTGGCAACCGCCGTGATGGGAGCAGGACTATATTTGTACGGCGGAT
GGCGCAAAGGCAAACACTTGCCCGCAGAGGAAGCTGCGCAAAGGTCTGAGGAGTTTCGCGCGCATACAGGCACCAGTGCG
TCGTTTCGAGATCTTGTACCGACGACTGTATGGAAGCTGTCACCTTTGCGCCGTATCACAAGGTTGCATCGACGACTTCA
TAGAAGACTTCATCTTCATAGACTCCGTGTGATAAAAAAGAATAAACGACAATAG

Upstream 100 bases:

>100_bases
TTGCCGAGGGGTTACAGCTCTAATAAAGACGGTAGATGCTTTCTGGTTTATGATAAGCGCTTTTGTTTAGTCAGCCCTGC
ATAGCGCAAAAGGATAAACA

Downstream 100 bases:

>100_bases
CGTTATACATATATCTATGTATAACGCCTAGTCGGGCGGCTTTTACTCATTAGCATGGGCGAGTACATTATTCATCATAC
TTACCTACTACTGCAAATAC

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MSKTDTSIGKRRDLTQGSIPKTMLLFALPTLGSSALQSLNGSINAVWVGRFLGEEALAATANGNILMFILISFVFGFGMA
STILIGQAMGSRDNAMVKKTMGTALGSIIPISVIVSAVGWIFAPMLLELLGTPASAVELALTYLRMIFIAMPVTLTFTLI
MMALRGTGDSTTPLWFIIISVVIDLILTPTLILGLGPFPEWGIFGSAFATAVANTLALIGMLATMYLRGSVLTLKLPELR
FLRADRDILKSMFSKGLPMGLQMIVISSAALTMLSLINREGVQTTAAYSATQQLWTYVQMPAMALSAAASAMVAQNIGAN
QWHRIAGITRWGLIFNLTLTGFIIILLTIFDETILGLFLGSDSEAVPIGRHIQLMATWGFIFFGIAQVLFGTMRANGYVI
WPLIVMVISMYPVRLGFAFGLYPLLGTDALWLSFPAGMVATAVMGAGLYLYGGWRKGKHLPAEEAAQRSEEFRAHTGTSA
SFRDLVPTTVWKLSPLRRITRLHRRLHRRLHLHRLRVIKKNKRQ

Sequences:

>Translated_524_residues
MSKTDTSIGKRRDLTQGSIPKTMLLFALPTLGSSALQSLNGSINAVWVGRFLGEEALAATANGNILMFILISFVFGFGMA
STILIGQAMGSRDNAMVKKTMGTALGSIIPISVIVSAVGWIFAPMLLELLGTPASAVELALTYLRMIFIAMPVTLTFTLI
MMALRGTGDSTTPLWFIIISVVIDLILTPTLILGLGPFPEWGIFGSAFATAVANTLALIGMLATMYLRGSVLTLKLPELR
FLRADRDILKSMFSKGLPMGLQMIVISSAALTMLSLINREGVQTTAAYSATQQLWTYVQMPAMALSAAASAMVAQNIGAN
QWHRIAGITRWGLIFNLTLTGFIIILLTIFDETILGLFLGSDSEAVPIGRHIQLMATWGFIFFGIAQVLFGTMRANGYVI
WPLIVMVISMYPVRLGFAFGLYPLLGTDALWLSFPAGMVATAVMGAGLYLYGGWRKGKHLPAEEAAQRSEEFRAHTGTSA
SFRDLVPTTVWKLSPLRRITRLHRRLHRRLHLHRLRVIKKNKRQ
>Mature_523_residues
SKTDTSIGKRRDLTQGSIPKTMLLFALPTLGSSALQSLNGSINAVWVGRFLGEEALAATANGNILMFILISFVFGFGMAS
TILIGQAMGSRDNAMVKKTMGTALGSIIPISVIVSAVGWIFAPMLLELLGTPASAVELALTYLRMIFIAMPVTLTFTLIM
MALRGTGDSTTPLWFIIISVVIDLILTPTLILGLGPFPEWGIFGSAFATAVANTLALIGMLATMYLRGSVLTLKLPELRF
LRADRDILKSMFSKGLPMGLQMIVISSAALTMLSLINREGVQTTAAYSATQQLWTYVQMPAMALSAAASAMVAQNIGANQ
WHRIAGITRWGLIFNLTLTGFIIILLTIFDETILGLFLGSDSEAVPIGRHIQLMATWGFIFFGIAQVLFGTMRANGYVIW
PLIVMVISMYPVRLGFAFGLYPLLGTDALWLSFPAGMVATAVMGAGLYLYGGWRKGKHLPAEEAAQRSEEFRAHTGTSAS
FRDLVPTTVWKLSPLRRITRLHRRLHRRLHLHRLRVIKKNKRQ

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 57191; Mature: 57060

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTDTSIGKRRDLTQGSIPKTMLLFALPTLGSSALQSLNGSINAVWVGRFLGEEALAAT
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHCHHHHHCC
ANGNILMFILISFVFGFGMASTILIGQAMGSRDNAMVKKTMGTALGSIIPISVIVSAVGW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFAPMLLELLGTPASAVELALTYLRMIFIAMPVTLTFTLIMMALRGTGDSTTPLWFIIIS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VVIDLILTPTLILGLGPFPEWGIFGSAFATAVANTLALIGMLATMYLRGSVLTLKLPELR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHH
FLRADRDILKSMFSKGLPMGLQMIVISSAALTMLSLINREGVQTTAAYSATQQLWTYVQM
HHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
PAMALSAAASAMVAQNIGANQWHRIAGITRWGLIFNLTLTGFIIILLTIFDETILGLFLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDSEAVPIGRHIQLMATWGFIFFGIAQVLFGTMRANGYVIWPLIVMVISMYPVRLGFAFG
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
LYPLLGTDALWLSFPAGMVATAVMGAGLYLYGGWRKGKHLPAEEAAQRSEEFRAHTGTSA
HHHHHCCCHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
SFRDLVPTTVWKLSPLRRITRLHRRLHRRLHLHRLRVIKKNKRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKTDTSIGKRRDLTQGSIPKTMLLFALPTLGSSALQSLNGSINAVWVGRFLGEEALAAT
CCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHCHHHHHCC
ANGNILMFILISFVFGFGMASTILIGQAMGSRDNAMVKKTMGTALGSIIPISVIVSAVGW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFAPMLLELLGTPASAVELALTYLRMIFIAMPVTLTFTLIMMALRGTGDSTTPLWFIIIS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VVIDLILTPTLILGLGPFPEWGIFGSAFATAVANTLALIGMLATMYLRGSVLTLKLPELR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHH
FLRADRDILKSMFSKGLPMGLQMIVISSAALTMLSLINREGVQTTAAYSATQQLWTYVQM
HHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
PAMALSAAASAMVAQNIGANQWHRIAGITRWGLIFNLTLTGFIIILLTIFDETILGLFLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDSEAVPIGRHIQLMATWGFIFFGIAQVLFGTMRANGYVIWPLIVMVISMYPVRLGFAFG
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
LYPLLGTDALWLSFPAGMVATAVMGAGLYLYGGWRKGKHLPAEEAAQRSEEFRAHTGTSA
HHHHHCCCHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC
SFRDLVPTTVWKLSPLRRITRLHRRLHRRLHLHRLRVIKKNKRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]