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The map label for this gene is ligD

Identifier: 92119328

GI number:

Start: 4284719

End: 4287421

Strand: Direct

Name: ligD

Synonym: Nham_3907

Alternate gene names: NA

Gene position: NA

Preceding gene: 92119324

Following gene: 92119330

Centisome position: NA

GC content: NA

Gene sequence:

>2703_bases
ATGGTCAAAAAACTGCTGGTAAAATACCGCGCCAAACGCGATTTTTCGAAGACGGCTGAGCCCAGCGGAAACCTAAAGGT
CAAGCCCTCGAAGAGCCTTCGCTTCGTCATTCAGAAGCACGCAGCATCGCATCTCCATTACGACCTGAGGCTCGAACTCG
ACGGCGTCTTCAAATCTTGGGCGGTCACCAAGGGGCCGTCGCTGGATCCTCACGACAAGCGGCTTGCGGTTGAAGTCGAG
GATCATCCCCTGGACTACGGCGACTTCGAAGGCACCATTCCGAAGGGCCAGTACGGCGGCGGCACGGTCATGGTTTGGGA
TCGCGGCTATTGGGAATGCGACGACCCGGAGCGGGCATACCAGAAGGGCAAGCTGGACTTTACCCTGGAGGGTGAAAAAC
TTCACGGCGGCTGGATTCTAACTCGGATGCGAAAGCGAGAGGGCGAGAAGCGGACCAACTGGCTCCTGATCAAACATCGG
GATGAATTCGCTCGGGAAGGGAAGAAGAATAGGATCTTGCAAGAGGACACGTCGGTAGCCTCGAGCCGGTCGATGGACCA
GATCACGGCCGGCAAGGGCAAGGGTCCGAAGCCTTTTGTTGCGGCGAAGAGGTCAAGAGCACCTGCAAAGGCGGAATGGA
AACCGCACCGCGCCTCAGCCCGAGCATCGACGCCCAGAAAGAGATCTGCTCCCGACAGGTCCCGGGCCGGGCGTTCACCC
GAAAAGAAAGCCGGCGAGAAAGGCAACGCGATTGCCGATCGAAGCATGCCGCCCTTCATCGCGCCCCAGTTATGCTCTTT
GGTCGAGCGCCCCCCCTCCGGCAGCGATTGGATCCACGAAATCAAGTTCGACGGCTACCGCATCCAGATGCGGGTCGAGA
ACAGCGACGTCTCCTTGAAGACTCGCAAGGGCCTGGATTGGACGCCGAAGTTCGGCGCGATTGCGAAGGCCGCGGACGCA
CTGCCCGATTGCATCGTGGACGGGGAAATCGTTGCCCTCGACCATCGAGGTTCGCCGGATTTCGCGGGCTTGCAGGCCGC
CCTGTCGGATGGAAAGAGCGACGACCTCATCTTTTTCGCCTTCGATCTTTTGTTTCTGAAGGGCGATGACCTACGCCGGC
AAAGTCTTGCCGACCGCAAGCAGGCCTTGAAGAAACTTATCGAGAAGACATACGGTAAGGACCAGGTCCAGGCCGAAATC
CGGTACGTCGAGCATTTCGAGAGCGGTGGCGAAGCTGTGCTCAAATCGGCCTGCAGGATGTCGCTCGAGGGCATCGTCTC
GAAGCAAACTGCCGCTCGTTACGTGTCCGGGCGAACAGAGTCCTGGTCCAAAGCCAAGTGTCGCGCCGGGCATGAAGTGG
TCATCGGCGGCTGGAAAAGCAATGGTAACCAGTTCAAATCGTTGATGGCCGGCATATATCGGGGTGATCACCTCGTATAC
GTCGGTAACGTCGGGACCGGTTACAGTGCCGAGAAAGTCGCGCGCCTGATGCCGAGGCTTAAGGCCGCCGCTTCGGCGAC
AAACCCGTTCGTCGGCAATAATGCGCCTCGCAAGAAAGCCGGAATGCATTGGTTGAAGCCCGAATTGGTGGCCGAAATCG
AGTTCGCCGGATTCACCGGTGCCGGCATGATCCGGCAAGCGGCCTTCAAGGGCCTTCGCCAGGACAAGCCCGCCTCGGAG
GTCGAAGCCGAGACGCCGGCGCCAGCTGACAGCGCCGGCATCGCAAAGCCTGCACCGGCGCTGCGGACCAAGTCCTCCGC
GAGCCTCCCTTCCGCTGCAAAGGGCGGTATTGTCATGGGGGTGCCCCTGAGCCGGCCGGATAAGATCCTATGGCCCGATG
ATGGGCAAGGACCGATCACCAAACTCGACCTCGCCCTGTATTACGAAAGCGTGGGCGCTCGGATGATGGAGCATCTCAAG
GGCCGTCCATGCTCGATAATACGAGCCCCGGACGGTATCGAAGGACAGCGCTTCTTTCAGCGCCATTCGATGAAGGGCGG
CTCCAGCCTGCTTGAGGAGGTCACCGTCTCCGGCGATCGAAAACCCTATGTGCAAATCGACCGGATCGAGGGTCTGGCCG
CCGTGGCGCAGAGTGCCGGTGTGGAGTTGCATCCATGGAACAACCAGCCCGGCGACCCCGCCCTTCCCGGCCGGCTTGTT
TTCGATCTCGACCCGGCGCCGGATGTGGACTTCGCGGTCGTGATCGACGCCGCCAAGGAAATGCGCGACCGCCTCTCCCA
GCTTGGCCTCGTGTCGTTCTGCAAGACCACCGGCGGCAAAGGCTTGCATGTCGTTACGCCGCTCGCGCGCCCGAAAAAAG
GACAACGACTGGACTGGGCCGCAGCGAAGCAGTTCGCCCGCGACGTGTGCAGCCAAATGGCACGCGAAAGTCCGGACCGA
TACCTCATCAACATGAGCAAGGCGAAGCGAACGGGAAAGATATTTCTCGACTATTTGCGGAACGATCAATTCTCGACCGC
GGTGGCGCCACTCTCTCCCCGGGCGCGCGCCCATGCGCCGGTCTCAATGCCGATCACGTGGGCCAAGGTCAAACCTGGCC
TCGATCCCATGCAATACACCATCCGCACCGTGCCCCAGCTTCTCAAGAAGTCGAAGGCGTGGTTCGAATACTGCGAAAGT
GAACGCCCGCTTTTGGACCCGATCGCTAAACTGGCAAGACGGTCGACAAAGCTGGCAGCTTGA

Upstream 100 bases:

>100_bases
TTCCAATAGGCACGAGGCGCCATTTGATCCTCCGTGATAGGTGGAACTTTAACCGAACCGGAAACTTTCAGTTCCGCGGG
GGATTCGAGCGAGGTGCCTC

Downstream 100 bases:

>100_bases
CGCTTTTCTTTCGAACGCCGCGCGCGCCTGTCAAAGCGTCCTCCGTTTGAAAGGGCGCGGAACTTCCGCGTTAACGATCC
GCCCGACCTCGCCCTCGCGC

Product: ATP-dependent DNA ligase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>900_residues
MVKKLLVKYRAKRDFSKTAEPSGNLKVKPSKSLRFVIQKHAASHLHYDLRLELDGVFKSWAVTKGPSLDPHDKRLAVEVE
DHPLDYGDFEGTIPKGQYGGGTVMVWDRGYWECDDPERAYQKGKLDFTLEGEKLHGGWILTRMRKREGEKRTNWLLIKHR
DEFAREGKKNRILQEDTSVASSRSMDQITAGKGKGPKPFVAAKRSRAPAKAEWKPHRASARASTPRKRSAPDRSRAGRSP
EKKAGEKGNAIADRSMPPFIAPQLCSLVERPPSGSDWIHEIKFDGYRIQMRVENSDVSLKTRKGLDWTPKFGAIAKAADA
LPDCIVDGEIVALDHRGSPDFAGLQAALSDGKSDDLIFFAFDLLFLKGDDLRRQSLADRKQALKKLIEKTYGKDQVQAEI
RYVEHFESGGEAVLKSACRMSLEGIVSKQTAARYVSGRTESWSKAKCRAGHEVVIGGWKSNGNQFKSLMAGIYRGDHLVY
VGNVGTGYSAEKVARLMPRLKAAASATNPFVGNNAPRKKAGMHWLKPELVAEIEFAGFTGAGMIRQAAFKGLRQDKPASE
VEAETPAPADSAGIAKPAPALRTKSSASLPSAAKGGIVMGVPLSRPDKILWPDDGQGPITKLDLALYYESVGARMMEHLK
GRPCSIIRAPDGIEGQRFFQRHSMKGGSSLLEEVTVSGDRKPYVQIDRIEGLAAVAQSAGVELHPWNNQPGDPALPGRLV
FDLDPAPDVDFAVVIDAAKEMRDRLSQLGLVSFCKTTGGKGLHVVTPLARPKKGQRLDWAAAKQFARDVCSQMARESPDR
YLINMSKAKRTGKIFLDYLRNDQFSTAVAPLSPRARAHAPVSMPITWAKVKPGLDPMQYTIRTVPQLLKKSKAWFEYCES
ERPLLDPIAKLARRSTKLAA

Sequences:
NA

Specific function: NA

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA