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The map label for this gene is rdgB [H]

Identifier: 92115422

GI number: 92115422

Start: 3684398

End: 3685003

Strand: Direct

Name: rdgB [H]

Synonym: Csal_3307

Alternate gene names: 92115422

Gene position: 3684398-3685003 (Clockwise)

Preceding gene: 92115420

Following gene: 92115423

Centisome position: 99.67

GC content: 66.5

Gene sequence:

>606_bases
ATGGCGGATCAAGACACGCTGGTGTTGGCCAGCGGCAACACCGGCAAGCTGCGTGAATTCCAGAGCCTGCTGGCCCCGCT
AGGCCTCGAGGTGCGTCCGCAGCGTGACTTCGCTGTCACCGAGGTCGAGGAAACCGGCCTGACCTTCGTCGAGAATGCCC
TGCTCAAGGCGCGCGAAGCGTCTCGAGTGAGTGGTTTGCCCGCCTTGGCCGACGATTCGGGACTCGAGGTTGATGCCTTG
CAGGGCGCGCCGGGGATTCGATCGGCCCGCTTCGCGGGTGAGCCCTCCGATGATGCCGCCAACAATCGCAAGCTGCTGGA
GGCGCTCAAGGACGTTCCGGAAGGCCAGCGCGGCGCCCGCTTCTGGTGCGTGCTGGTGTATCTGCGGCATGCCGAGGACC
CGGTCCCGCGCATCGTGCAATGTGCCTGGGAAGGCGAAGTATTGGCATATCCGCGCGGCGAGGGCGGGTTCGGTTACGAC
TCGCTGTTCTGGGTGCCCGAGCGCGCCATGACCGCCGCAGAGTTGTCCGCCGAGGACAAGAACCGACTCAGCCATCGCGG
CAGGGCCATGCAGGCCCTGCTGGCGCAGCTCTCCGCGCCCTCATGA

Upstream 100 bases:

>100_bases
AGTTATTGTTTTTTATGTGTTATTAATTAGCGCCCGAGATGGTTTCCCGACCGGTGGGTTACTCGTAGAATGAGCGTCCG
AGTGATAAGGAGAAAGCATG

Downstream 100 bases:

>100_bases
GCATGCCGCTGCCGCCACTGTCCCTGTATGTGCATGTGCCCTGGTGCGTGCGCAAATGTCCGTATTGCGATTTCAACTCC
CATGGCATGGACCCGGACCG

Product: Ham1-like protein

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MADQDTLVLASGNTGKLREFQSLLAPLGLEVRPQRDFAVTEVEETGLTFVENALLKAREASRVSGLPALADDSGLEVDAL
QGAPGIRSARFAGEPSDDAANNRKLLEALKDVPEGQRGARFWCVLVYLRHAEDPVPRIVQCAWEGEVLAYPRGEGGFGYD
SLFWVPERAMTAAELSAEDKNRLSHRGRAMQALLAQLSAPS

Sequences:

>Translated_201_residues
MADQDTLVLASGNTGKLREFQSLLAPLGLEVRPQRDFAVTEVEETGLTFVENALLKAREASRVSGLPALADDSGLEVDAL
QGAPGIRSARFAGEPSDDAANNRKLLEALKDVPEGQRGARFWCVLVYLRHAEDPVPRIVQCAWEGEVLAYPRGEGGFGYD
SLFWVPERAMTAAELSAEDKNRLSHRGRAMQALLAQLSAPS
>Mature_200_residues
ADQDTLVLASGNTGKLREFQSLLAPLGLEVRPQRDFAVTEVEETGLTFVENALLKAREASRVSGLPALADDSGLEVDALQ
GAPGIRSARFAGEPSDDAANNRKLLEALKDVPEGQRGARFWCVLVYLRHAEDPVPRIVQCAWEGEVLAYPRGEGGFGYDS
LFWVPERAMTAAELSAEDKNRLSHRGRAMQALLAQLSAPS

Specific function: Hydrolyzes O6 atom-containing purine bases deoxyinosine triphosphate (dITP) and xanthosine triphosphate (XTP) as well as 2'-deoxy-N-6-hydroxylaminopurine triposphate (dHAPTP) to nucleotide monophosphate and pyrophosphate. Probably excludes non- standard p

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Escherichia coli, GI1789324, Length=191, Percent_Identity=58.1151832460733, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 21804; Mature: 21673

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQDTLVLASGNTGKLREFQSLLAPLGLEVRPQRDFAVTEVEETGLTFVENALLKAREA
CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHH
SRVSGLPALADDSGLEVDALQGAPGIRSARFAGEPSDDAANNRKLLEALKDVPEGQRGAR
HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
FWCVLVYLRHAEDPVPRIVQCAWEGEVLAYPRGEGGFGYDSLFWVPERAMTAAELSAEDK
HHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHCCHHH
NRLSHRGRAMQALLAQLSAPS
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADQDTLVLASGNTGKLREFQSLLAPLGLEVRPQRDFAVTEVEETGLTFVENALLKAREA
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHH
SRVSGLPALADDSGLEVDALQGAPGIRSARFAGEPSDDAANNRKLLEALKDVPEGQRGAR
HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
FWCVLVYLRHAEDPVPRIVQCAWEGEVLAYPRGEGGFGYDSLFWVPERAMTAAELSAEDK
HHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHCCHHH
NRLSHRGRAMQALLAQLSAPS
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]