| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92115249
Identifier: 92115249
GI number: 92115249
Start: 3490499
End: 3491356
Strand: Direct
Name: 92115249
Synonym: Csal_3134
Alternate gene names: NA
Gene position: 3490499-3491356 (Clockwise)
Preceding gene: 92115248
Following gene: 92115250
Centisome position: 94.42
GC content: 68.07
Gene sequence:
>858_bases ATGGCTCAGACCGTGCTTTTGGCGTGTGACCTGTCCGCCGACAACCGTGCCGCCTTCGCGCGCGCCATCAAACTGGCGCA TGCCAGCGGCAGCCGCCTGGACATTCTGCATGTCCTCGACCCCTATCTGCCGCGCCAGACCCTGCGCGACCTGGAGCGCG AGGTCGTCGACGAGCTCGAGCGTCAGCTGACCGACATCCGCGAAGACTATGCCCTGCCGGCGCCCGAGACGCTGATACAG ACGGTGACCGGCGCTCCCTATGCCGAGATCATCCGCGAGGCACATGACCGGGACGCCACCATGATCGTGCTCGGCACCCA CCGCAAACGCGGTCAGCATGCGCTGGTGGGGGGCACGACCCTCGCGCGGGTCTTGAGCCGCGCGCCCTGCCCGGTGCTCA CCGTGAGCCACAGCCCCGAACAGGCCTGGCAGGACGTGCTGGTTCCGGTGGACTTCTCGCTGGCCAGCCGCCACACCTTG CGCGACGTCCTGACGCATTTCTCCGAGGCACGCCTGACGCTATTGCATGCCTGGCACCTGCCGGGTGATGAGGAAATGGG CTCCGACAGCGGCTACGCACGCTGGCGGGAGCGCGAGCTCGCCGCGCGGCGCATACGCCTGGAAGCGGAAATCGACAAAC TGATGGAAGAGGTCGGCGACGTGCCCGAACTCGAGCTGGTCCTCGAGCAGGGCGAGCCCGGCGAGGTGTTGATCGACTAC CTGCGCCGTCAGCCCCCCGACCTGCTGGCACTGGGGCACCAGGACCTGGCGCTGTTCGGCCGCCATCACCCGGCGCCCCT GATCGAGCGCTTGCTCGCCGACGTGCATGTGGACATGATGGTGTGCCGCGCCTGGTAG
Upstream 100 bases:
>100_bases GTGATGCCCCAGGCTGCGGTGACATACTTGCGCATTGCCGTCAGCTCAGCGTGGTGTGGCGAACACCCGCATACCGTCTT CTCGCAGGGAGGGACGTACC
Downstream 100 bases:
>100_bases CGCGAATCTTCACCCCTCGCGTCCACAAGGATCTTGCACATGCGAGCCGTCATCCAACGTGTCCGTCACGCCGGCGTCGA TGTCGACGCCCGAACCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Usp Universal Stress Protein; Universal Stress Family Protein; Universal Stress Protein Usp; Universal Stress Family; Uspa Domain-Containing Protein; Universal Stress Protein UspA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MAQTVLLACDLSADNRAAFARAIKLAHASGSRLDILHVLDPYLPRQTLRDLEREVVDELERQLTDIREDYALPAPETLIQ TVTGAPYAEIIREAHDRDATMIVLGTHRKRGQHALVGGTTLARVLSRAPCPVLTVSHSPEQAWQDVLVPVDFSLASRHTL RDVLTHFSEARLTLLHAWHLPGDEEMGSDSGYARWRERELAARRIRLEAEIDKLMEEVGDVPELELVLEQGEPGEVLIDY LRRQPPDLLALGHQDLALFGRHHPAPLIERLLADVHVDMMVCRAW
Sequences:
>Translated_285_residues MAQTVLLACDLSADNRAAFARAIKLAHASGSRLDILHVLDPYLPRQTLRDLEREVVDELERQLTDIREDYALPAPETLIQ TVTGAPYAEIIREAHDRDATMIVLGTHRKRGQHALVGGTTLARVLSRAPCPVLTVSHSPEQAWQDVLVPVDFSLASRHTL RDVLTHFSEARLTLLHAWHLPGDEEMGSDSGYARWRERELAARRIRLEAEIDKLMEEVGDVPELELVLEQGEPGEVLIDY LRRQPPDLLALGHQDLALFGRHHPAPLIERLLADVHVDMMVCRAW >Mature_284_residues AQTVLLACDLSADNRAAFARAIKLAHASGSRLDILHVLDPYLPRQTLRDLEREVVDELERQLTDIREDYALPAPETLIQT VTGAPYAEIIREAHDRDATMIVLGTHRKRGQHALVGGTTLARVLSRAPCPVLTVSHSPEQAWQDVLVPVDFSLASRHTLR DVLTHFSEARLTLLHAWHLPGDEEMGSDSGYARWRERELAARRIRLEAEIDKLMEEVGDVPELELVLEQGEPGEVLIDYL RRQPPDLLALGHQDLALFGRHHPAPLIERLLADVHVDMMVCRAW
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32090; Mature: 31959
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTVLLACDLSADNRAAFARAIKLAHASGSRLDILHVLDPYLPRQTLRDLEREVVDELE CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHH RQLTDIREDYALPAPETLIQTVTGAPYAEIIREAHDRDATMIVLGTHRKRGQHALVGGTT HHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEECHHH LARVLSRAPCPVLTVSHSPEQAWQDVLVPVDFSLASRHTLRDVLTHFSEARLTLLHAWHL HHHHHHCCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECC PGDEEMGSDSGYARWRERELAARRIRLEAEIDKLMEEVGDVPELELVLEQGEPGEVLIDY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECCCCCHHHHHHH LRRQPPDLLALGHQDLALFGRHHPAPLIERLLADVHVDMMVCRAW HHCCCCHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQTVLLACDLSADNRAAFARAIKLAHASGSRLDILHVLDPYLPRQTLRDLEREVVDELE CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHH RQLTDIREDYALPAPETLIQTVTGAPYAEIIREAHDRDATMIVLGTHRKRGQHALVGGTT HHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEECHHH LARVLSRAPCPVLTVSHSPEQAWQDVLVPVDFSLASRHTLRDVLTHFSEARLTLLHAWHL HHHHHHCCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECC PGDEEMGSDSGYARWRERELAARRIRLEAEIDKLMEEVGDVPELELVLEQGEPGEVLIDY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECCCCCHHHHHHH LRRQPPDLLALGHQDLALFGRHHPAPLIERLLADVHVDMMVCRAW HHCCCCHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA