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The map label for this gene is yfjD [H]

Identifier: 92115134

GI number: 92115134

Start: 3360019

End: 3361302

Strand: Direct

Name: yfjD [H]

Synonym: Csal_3019

Alternate gene names: 92115134

Gene position: 3360019-3361302 (Clockwise)

Preceding gene: 92115133

Following gene: 92115137

Centisome position: 90.89

GC content: 63.24

Gene sequence:

>1284_bases
TTGAGCGATGACATACCCTTGGGGCTGCTGCTGACGCTGCTGCTCGTGCTCATTTGCCTATCCGCCTTCTTCTCCAGCTC
GGAAACCGGGATGATGTCGATCAACCGCTACCGCCTGTCGCATCAGGCCAATAGCGGCGAGCGCGCGGCCAAGCGCGTGC
TGCGACTGCTCAGTCGCCCCGACCGCCTCATCGGCGTCATCCTCATCGGCAACAACTTCGTCAACAATCTCGCGGCGTCG
ATTGCCACGATCATCGCCATTCACTTCTTCGGCGATGTCTCCGGGCCGGCCATCGCCACGGCGGCGTTGACCATCGTGAT
CCTGATCTTCGCCGAGGTCACGCCCAAGACCTTCGCCGCCGTCAAGCCCGAACGCATCGCGTATCCCGCGTCGGTGGCCC
TCGAACCGCTGCTCAAGCTGTTCTACCCGTTCGTGTGGCTGGTCAACGCCATTTCCAACGGTCTGCTGCGGCTGCTGGGC
ATCCGCGACATCGACGGCAGCGCCGACAACCTGACCCGCGACGAGTTGCGCACGGTGGTGCATGAAGCCGGCACCATGAT
TCCACGTCGTCACCAGACGATGCTGCTGTCGATCCTCGACCTGGAGAATGTCACCGTCAACGACATCATGGTGCCGCGTC
AGGAGATCGCCGGCATCGATCTCGACGACGACCTCGAGACGATCCTCGCCCAGATCCGCTCCAGCCAGCACACCCGGGTG
CCGGTGTACAAAGGCGACATCAACAACATCATCGGGATACTGCACCTGCGCAATGCCGCCCGTTTCCTCTCCAAGCCCGA
AGTAACCAAGGCTGCCATCGTGCAGGAGGCCCGGGAGCCCTACTTCATCCCCGAATCGACCCCGCTGCACACGCAGCTGC
TCAACTTTCAGCAGCACAAGCGGCGCATCGGCATCGTGGTCGACGAATACGGCGACGTGGAAGGACTGGCGACACTGGAA
GACATCCTCGAGGAGATCGTCGGCGAGTTCACCACCGACGAAGCCGCCACCCACCGCGAGATCCATCCGCAGGACGACGG
CAGCTACATCATCGAGGGCACGACCAACATTCGCGACATCAACAAGGTGCTCGCCTGGCAACTGCCCACCGATGGCCCCA
AGACCCTCAACGGCCTGATCCTCGAGCACCTGGAGGCCTTCCCCGACGCGCCCGCCTGCCTGCAGCTGGGCGCGATCCGC
ATGGAAATCCTGCAGATCAAGGACAACCTGATCACCTCGGCGCGGTGCTGGCAGTCCGCACGCCGTGCCAGGGCCCTGGG
CTAG

Upstream 100 bases:

>100_bases
GCTCGTCTTCCACGACGTGTGATAGCCCAGAGGTCGCCTTGACACCCCCGGGGGGAATCCCTACAAACGACGTTGGCTTT
CAAGCGAGGACCTCTCCACC

Downstream 100 bases:

>100_bases
GCCAGGGCTAAGACTCCACCCCGATCTCGGCTTCCGCTTTGGCCTTGAGCGTCGCGACACGGCGCTCCATTTCGGCGCGG
GTCGCCTGACCGGCAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSDDIPLGLLLTLLLVLICLSAFFSSSETGMMSINRYRLSHQANSGERAAKRVLRLLSRPDRLIGVILIGNNFVNNLAAS
IATIIAIHFFGDVSGPAIATAALTIVILIFAEVTPKTFAAVKPERIAYPASVALEPLLKLFYPFVWLVNAISNGLLRLLG
IRDIDGSADNLTRDELRTVVHEAGTMIPRRHQTMLLSILDLENVTVNDIMVPRQEIAGIDLDDDLETILAQIRSSQHTRV
PVYKGDINNIIGILHLRNAARFLSKPEVTKAAIVQEAREPYFIPESTPLHTQLLNFQQHKRRIGIVVDEYGDVEGLATLE
DILEEIVGEFTTDEAATHREIHPQDDGSYIIEGTTNIRDINKVLAWQLPTDGPKTLNGLILEHLEAFPDAPACLQLGAIR
MEILQIKDNLITSARCWQSARRARALG

Sequences:

>Translated_427_residues
MSDDIPLGLLLTLLLVLICLSAFFSSSETGMMSINRYRLSHQANSGERAAKRVLRLLSRPDRLIGVILIGNNFVNNLAAS
IATIIAIHFFGDVSGPAIATAALTIVILIFAEVTPKTFAAVKPERIAYPASVALEPLLKLFYPFVWLVNAISNGLLRLLG
IRDIDGSADNLTRDELRTVVHEAGTMIPRRHQTMLLSILDLENVTVNDIMVPRQEIAGIDLDDDLETILAQIRSSQHTRV
PVYKGDINNIIGILHLRNAARFLSKPEVTKAAIVQEAREPYFIPESTPLHTQLLNFQQHKRRIGIVVDEYGDVEGLATLE
DILEEIVGEFTTDEAATHREIHPQDDGSYIIEGTTNIRDINKVLAWQLPTDGPKTLNGLILEHLEAFPDAPACLQLGAIR
MEILQIKDNLITSARCWQSARRARALG
>Mature_426_residues
SDDIPLGLLLTLLLVLICLSAFFSSSETGMMSINRYRLSHQANSGERAAKRVLRLLSRPDRLIGVILIGNNFVNNLAASI
ATIIAIHFFGDVSGPAIATAALTIVILIFAEVTPKTFAAVKPERIAYPASVALEPLLKLFYPFVWLVNAISNGLLRLLGI
RDIDGSADNLTRDELRTVVHEAGTMIPRRHQTMLLSILDLENVTVNDIMVPRQEIAGIDLDDDLETILAQIRSSQHTRVP
VYKGDINNIIGILHLRNAARFLSKPEVTKAAIVQEAREPYFIPESTPLHTQLLNFQQHKRRIGIVVDEYGDVEGLATLED
ILEEIVGEFTTDEAATHREIHPQDDGSYIIEGTTNIRDINKVLAWQLPTDGPKTLNGLILEHLEAFPDAPACLQLGAIRM
EILQIKDNLITSARCWQSARRARALG

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=365, Percent_Identity=25.7534246575342, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI40068055, Length=357, Percent_Identity=24.0896358543417, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI40068053, Length=357, Percent_Identity=24.0896358543417, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI94681046, Length=350, Percent_Identity=28, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI145693175, Length=398, Percent_Identity=51.7587939698493, Blast_Score=429, Evalue=1e-121,
Organism=Escherichia coli, GI1790664, Length=439, Percent_Identity=24.373576309795, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI87082033, Length=340, Percent_Identity=27.0588235294118, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1786879, Length=249, Percent_Identity=28.9156626506024, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1788119, Length=229, Percent_Identity=26.6375545851528, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17539402, Length=359, Percent_Identity=24.7910863509749, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324512, Length=364, Percent_Identity=25, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47258; Mature: 47127

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDIPLGLLLTLLLVLICLSAFFSSSETGMMSINRYRLSHQANSGERAAKRVLRLLSRP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHCCC
DRLIGVILIGNNFVNNLAASIATIIAIHFFGDVSGPAIATAALTIVILIFAEVTPKTFAA
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
VKPERIAYPASVALEPLLKLFYPFVWLVNAISNGLLRLLGIRDIDGSADNLTRDELRTVV
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
HEAGTMIPRRHQTMLLSILDLENVTVNDIMVPRQEIAGIDLDDDLETILAQIRSSQHTRV
HHHCCCCCCHHHHHHHHHHHCCCCCHHHEECCHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PVYKGDINNIIGILHLRNAARFLSKPEVTKAAIVQEAREPYFIPESTPLHTQLLNFQQHK
CEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHH
RRIGIVVDEYGDVEGLATLEDILEEIVGEFTTDEAATHREIHPQDDGSYIIEGTTNIRDI
HHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCCHHHH
NKVLAWQLPTDGPKTLNGLILEHLEAFPDAPACLQLGAIRMEILQIKDNLITSARCWQSA
HHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRARALG
HHHHCCC
>Mature Secondary Structure 
SDDIPLGLLLTLLLVLICLSAFFSSSETGMMSINRYRLSHQANSGERAAKRVLRLLSRP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHCCC
DRLIGVILIGNNFVNNLAASIATIIAIHFFGDVSGPAIATAALTIVILIFAEVTPKTFAA
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
VKPERIAYPASVALEPLLKLFYPFVWLVNAISNGLLRLLGIRDIDGSADNLTRDELRTVV
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
HEAGTMIPRRHQTMLLSILDLENVTVNDIMVPRQEIAGIDLDDDLETILAQIRSSQHTRV
HHHCCCCCCHHHHHHHHHHHCCCCCHHHEECCHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PVYKGDINNIIGILHLRNAARFLSKPEVTKAAIVQEAREPYFIPESTPLHTQLLNFQQHK
CEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHH
RRIGIVVDEYGDVEGLATLEDILEEIVGEFTTDEAATHREIHPQDDGSYIIEGTTNIRDI
HHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEECCCCHHHH
NKVLAWQLPTDGPKTLNGLILEHLEAFPDAPACLQLGAIRMEILQIKDNLITSARCWQSA
HHHHEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRARALG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]