| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is uxuB [H]
Identifier: 92115095
GI number: 92115095
Start: 3317237
End: 3318694
Strand: Direct
Name: uxuB [H]
Synonym: Csal_2979
Alternate gene names: 92115095
Gene position: 3317237-3318694 (Clockwise)
Preceding gene: 92115094
Following gene: 92115096
Centisome position: 89.74
GC content: 68.31
Gene sequence:
>1458_bases ATGACACCGACATCGATACCCAGCGTCCATGCGCCAGCCGAGGTGGGCATCGTGCATCTCGGCCTGGGCGCCTTCCACCG CGCCCACCAGGCGGTCTACCTGGAGCGCAACCTGGCCCGCCACGCAGGCGGCCCGTGGGGCATCGCCAGTGCCAACCTCC GCTCCAACCGCCGCCTCGTCGAGCTGATGCGCGAACGCGGTCAGCACTATCACGTCGCCGAGTACGCCGACAGCGACACC CTGACGCTGCGGGAAATCACGGCGATCCGCGAAACCTACTATGCCGGCCCCGACGGCGAGGACCTCGACGCCCTGCTGGA GCGCATGAGCGAACCCGATGTACGCATCGTCACGCTGACCGTGACGGAGAAGGGCTACCACCTTGATCCAGCCGACGGAC GACTACGGCTCGATGCCGCGCCGATTCGCCACGATATCGCCTCGCCCGCGCGGCCCTGGACCGCCCCGGGCATGCTGGTC GAGGCGCTGGCCCGGCGCCGGGCGGCCGGTACGCCACCTTTCGCGGTACTCAGTTGCGACAACATGCCGGACAACGGCAA GCGCGTCCATCGCGCGGCAATCGAGCTGGCGCGCCATCGCGACGAGCGGCTCGCCGAATGGATCGCCGATGCCGTCGCCT TCCCCTGCAGCATGGTCGATCGCATCGTCCCGGCGATGAGCGACGATGCGTTCCAGCGCCTGAGCGCCCTCGGCATCGAC GATCCGGCAGCGGTGGTCTGCGAGGCCTTCAGCCAGTGGGTGATCGAGGACGACTTCCCGCAGGGTCGCCCCGACTGGGA GCACGACGGGGTACAGATGGTCGCCGATGTCGCGCCCTTCGAGACCATGAAGCTGCGCATGCTCAACGGCAGCCACTCGC TGCTCGCCTATCTCGGCGCGCTGGCCGGCATCGAAACGGTGGCAGAAGCCGTCGAGCGCCCTGAATTCGTCGCTCTGCTG CGCCGCTACATGCGGGATGAAGCCGCACCGACACTCGCCATGCCGGCCGGTATCGATCTCGAGGCCTATGCCGACCGCCT GATCGAACGCTTCGCCAACGACAGCCTGCATCATCGCCTGCAGCAGATCGCCATGGACGGGTCCCAGAAACTGCCCCAGC GCTGGCTCGCCGGCGCCCGAAAACAGCTCGACACCGGCGGCGAGATCGGCTGCACGGCGCTCGGCGTGGCGGCCTGGATC CGCTATACCGCCGGCAACGACCTGGCAGGCGCGCGCCACCCGGTCGACGACCCGATGGCCGACACTTTCGCCACCCTGCA TGCCGACCATCGCGGGAGCGAAGCGCTGATCGCCGCCTTTCTCGGTCTCGACAGCGTTTTTCCGCGCGACCTGGCCGACG ATGCCCGCTTTTCAGCCGCAGTGCTCGAGGCCTACCGCACACTGGACGAAGGTGGCGTCGAGAGATCGCTGACCGGCCTC GACGCACGCACACGATAG
Upstream 100 bases:
>100_bases GCCGTTTCTGATCTGCAATCTCGTGGTGCTGCTGCTGGTCGCATACATCCCCGCCCTGTCACTCTGGCTACCCAACCTGC TGCTCGGGGAGTGATCGTTC
Downstream 100 bases:
>100_bases GAGACGACCATGGAACACACCTGGCGCTGGTTCGGGCCCGACGACCCGATCACCCTCGACGAGATTCGCCAGACCGGAGC CACCGGTATCGTCACCGCCC
Product: mannitol dehydrogenase-like protein
Products: NA
Alternate protein names: Fructuronate reductase [H]
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MTPTSIPSVHAPAEVGIVHLGLGAFHRAHQAVYLERNLARHAGGPWGIASANLRSNRRLVELMRERGQHYHVAEYADSDT LTLREITAIRETYYAGPDGEDLDALLERMSEPDVRIVTLTVTEKGYHLDPADGRLRLDAAPIRHDIASPARPWTAPGMLV EALARRRAAGTPPFAVLSCDNMPDNGKRVHRAAIELARHRDERLAEWIADAVAFPCSMVDRIVPAMSDDAFQRLSALGID DPAAVVCEAFSQWVIEDDFPQGRPDWEHDGVQMVADVAPFETMKLRMLNGSHSLLAYLGALAGIETVAEAVERPEFVALL RRYMRDEAAPTLAMPAGIDLEAYADRLIERFANDSLHHRLQQIAMDGSQKLPQRWLAGARKQLDTGGEIGCTALGVAAWI RYTAGNDLAGARHPVDDPMADTFATLHADHRGSEALIAAFLGLDSVFPRDLADDARFSAAVLEAYRTLDEGGVERSLTGL DARTR
Sequences:
>Translated_485_residues MTPTSIPSVHAPAEVGIVHLGLGAFHRAHQAVYLERNLARHAGGPWGIASANLRSNRRLVELMRERGQHYHVAEYADSDT LTLREITAIRETYYAGPDGEDLDALLERMSEPDVRIVTLTVTEKGYHLDPADGRLRLDAAPIRHDIASPARPWTAPGMLV EALARRRAAGTPPFAVLSCDNMPDNGKRVHRAAIELARHRDERLAEWIADAVAFPCSMVDRIVPAMSDDAFQRLSALGID DPAAVVCEAFSQWVIEDDFPQGRPDWEHDGVQMVADVAPFETMKLRMLNGSHSLLAYLGALAGIETVAEAVERPEFVALL RRYMRDEAAPTLAMPAGIDLEAYADRLIERFANDSLHHRLQQIAMDGSQKLPQRWLAGARKQLDTGGEIGCTALGVAAWI RYTAGNDLAGARHPVDDPMADTFATLHADHRGSEALIAAFLGLDSVFPRDLADDARFSAAVLEAYRTLDEGGVERSLTGL DARTR >Mature_484_residues TPTSIPSVHAPAEVGIVHLGLGAFHRAHQAVYLERNLARHAGGPWGIASANLRSNRRLVELMRERGQHYHVAEYADSDTL TLREITAIRETYYAGPDGEDLDALLERMSEPDVRIVTLTVTEKGYHLDPADGRLRLDAAPIRHDIASPARPWTAPGMLVE ALARRRAAGTPPFAVLSCDNMPDNGKRVHRAAIELARHRDERLAEWIADAVAFPCSMVDRIVPAMSDDAFQRLSALGIDD PAAVVCEAFSQWVIEDDFPQGRPDWEHDGVQMVADVAPFETMKLRMLNGSHSLLAYLGALAGIETVAEAVERPEFVALLR RYMRDEAAPTLAMPAGIDLEAYADRLIERFANDSLHHRLQQIAMDGSQKLPQRWLAGARKQLDTGGEIGCTALGVAAWIR YTAGNDLAGARHPVDDPMADTFATLHADHRGSEALIAAFLGLDSVFPRDLADDARFSAAVLEAYRTLDEGGVERSLTGLD ARTR
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=482, Percent_Identity=47.7178423236515, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1788497, Length=477, Percent_Identity=47.1698113207547, Blast_Score=396, Evalue=1e-111, Organism=Escherichia coli, GI1787823, Length=468, Percent_Identity=43.5897435897436, Blast_Score=382, Evalue=1e-107, Organism=Escherichia coli, GI48994885, Length=371, Percent_Identity=26.6846361185984, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1790028, Length=301, Percent_Identity=27.5747508305648, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6324401, Length=463, Percent_Identity=38.0129589632829, Blast_Score=303, Evalue=3e-83, Organism=Saccharomyces cerevisiae, GI6320765, Length=463, Percent_Identity=38.0129589632829, Blast_Score=303, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.57 [H]
Molecular weight: Translated: 53201; Mature: 53069
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTSIPSVHAPAEVGIVHLGLGAFHRAHQAVYLERNLARHAGGPWGIASANLRSNRRLV CCCCCCCCCCCCHHHCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ELMRERGQHYHVAEYADSDTLTLREITAIRETYYAGPDGEDLDALLERMSEPDVRIVTLT HHHHHCCCCEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEE VTEKGYHLDPADGRLRLDAAPIRHDIASPARPWTAPGMLVEALARRRAAGTPPFAVLSCD EECCCCEECCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC NMPDNGKRVHRAAIELARHRDERLAEWIADAVAFPCSMVDRIVPAMSDDAFQRLSALGID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC DPAAVVCEAFSQWVIEDDFPQGRPDWEHDGVQMVADVAPFETMKLRMLNGSHSLLAYLGA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEEEEECCCHHHHHHHHH LAGIETVAEAVERPEFVALLRRYMRDEAAPTLAMPAGIDLEAYADRLIERFANDSLHHRL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCHHHHHHH QQIAMDGSQKLPQRWLAGARKQLDTGGEIGCTALGVAAWIRYTAGNDLAGARHPVDDPMA HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DTFATLHADHRGSEALIAAFLGLDSVFPRDLADDARFSAAVLEAYRTLDEGGVERSLTGL HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC DARTR CCCCC >Mature Secondary Structure TPTSIPSVHAPAEVGIVHLGLGAFHRAHQAVYLERNLARHAGGPWGIASANLRSNRRLV CCCCCCCCCCCHHHCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH ELMRERGQHYHVAEYADSDTLTLREITAIRETYYAGPDGEDLDALLERMSEPDVRIVTLT HHHHHCCCCEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEE VTEKGYHLDPADGRLRLDAAPIRHDIASPARPWTAPGMLVEALARRRAAGTPPFAVLSCD EECCCCEECCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC NMPDNGKRVHRAAIELARHRDERLAEWIADAVAFPCSMVDRIVPAMSDDAFQRLSALGID CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC DPAAVVCEAFSQWVIEDDFPQGRPDWEHDGVQMVADVAPFETMKLRMLNGSHSLLAYLGA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHEEEEEECCCHHHHHHHHH LAGIETVAEAVERPEFVALLRRYMRDEAAPTLAMPAGIDLEAYADRLIERFANDSLHHRL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCHHHHHHH QQIAMDGSQKLPQRWLAGARKQLDTGGEIGCTALGVAAWIRYTAGNDLAGARHPVDDPMA HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH DTFATLHADHRGSEALIAAFLGLDSVFPRDLADDARFSAAVLEAYRTLDEGGVERSLTGL HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC DARTR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]