| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92114908
Identifier: 92114908
GI number: 92114908
Start: 3121772
End: 3122356
Strand: Direct
Name: 92114908
Synonym: Csal_2791
Alternate gene names: NA
Gene position: 3121772-3122356 (Clockwise)
Preceding gene: 92114907
Following gene: 92114909
Centisome position: 84.45
GC content: 49.06
Gene sequence:
>585_bases TTGAATATTGGCATCTTTATTTACAATGAGGCTGAGGTGCTCGATTTTTCAGGGCCGTTTGAGGTGTTCTCCACCCCTTC GCGCTTGTGTGACGAAACCGCCCCCTTCAAGGTGTTTCTAATTTCTGAACACAATACCGTGGTGACGGCTAGAGCCGGTT ACAAAGTTCTTCCCGATTACTCTACTGAAGAACATCCGCCGCTTGACGTGCTGATCATTTCAGGTGGAGTGCATGCCTCT GAAATGAAGAACAAAGTGGTTACCGATTGGATCAAGGGGCAATCTCATTCCGTAAAAATCATTGCTACTGTTTGCACTGG CATCTTCTTCCTTGCGCAAGCTGTTCAGTCGTTGAGCTGTAAAGTCACCACCCACTGGGAGGACATTCCGGATCTCCGGA AAATGTTCAGCCGTCTCACCGTGGTAGACAGTGTCCGGTGGGTCGATGAGGGCAACATCGTTAGTTCGGGCGGCATATCT GCTGGAATAGATATGAGTCTCTATTTGGTCAGTCGTTTGCACAGCGAGGATTTGGCGGCGAAAACGGCGCATCAGATGGA GTTCGCATGGACAAGAAACACATAA
Upstream 100 bases:
>100_bases AGTTCGCTACGGCCCTGACGGGCCTCCGTCGGACAGCCTTTCCATTCCGCTCCAAGGCGGCCGTTTAAAAAAATATCGTC ATATGCTTTAGGAGAACGGA
Downstream 100 bases:
>100_bases CCAACCGCGTTAGGCGGACGGTGGCCCTCCCCTGATCAAATTCGAGGATTTTCATTATGACGATTCGGAATGCCGAGGAA CAGGATTTAGCGAGAGTCGT
Product: ThiJ/PfpI
Products: NA
Alternate protein names: ThiJ/PfpI Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; DJ-1/PfpI Family; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Regulatory Protein; AraC-Family Transcriptional Regulator; Transcriptional Regulator Arac Family; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA-Family Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator DarR; Regulatory Protein; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcription Regulator; AraC Family Regulatory Helix-Turn-Helix; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; ThiJ Family Protein; Transcription Regulator Protein Thij/Pfpi; Isonitrile Hydratase; AraC Family Transcription Regulator Protein; Inosine/Uridine-Preferring Nucleoside Hydrolase; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNIGIFIYNEAEVLDFSGPFEVFSTPSRLCDETAPFKVFLISEHNTVVTARAGYKVLPDYSTEEHPPLDVLIISGGVHAS EMKNKVVTDWIKGQSHSVKIIATVCTGIFFLAQAVQSLSCKVTTHWEDIPDLRKMFSRLTVVDSVRWVDEGNIVSSGGIS AGIDMSLYLVSRLHSEDLAAKTAHQMEFAWTRNT
Sequences:
>Translated_194_residues MNIGIFIYNEAEVLDFSGPFEVFSTPSRLCDETAPFKVFLISEHNTVVTARAGYKVLPDYSTEEHPPLDVLIISGGVHAS EMKNKVVTDWIKGQSHSVKIIATVCTGIFFLAQAVQSLSCKVTTHWEDIPDLRKMFSRLTVVDSVRWVDEGNIVSSGGIS AGIDMSLYLVSRLHSEDLAAKTAHQMEFAWTRNT >Mature_194_residues MNIGIFIYNEAEVLDFSGPFEVFSTPSRLCDETAPFKVFLISEHNTVVTARAGYKVLPDYSTEEHPPLDVLIISGGVHAS EMKNKVVTDWIKGQSHSVKIIATVCTGIFFLAQAVQSLSCKVTTHWEDIPDLRKMFSRLTVVDSVRWVDEGNIVSSGGIS AGIDMSLYLVSRLHSEDLAAKTAHQMEFAWTRNT
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21525; Mature: 21525
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGIFIYNEAEVLDFSGPFEVFSTPSRLCDETAPFKVFLISEHNTVVTARAGYKVLPDY CCEEEEEECCCEEEECCCCHHHHCCCHHHHCCCCCEEEEEEECCCEEEEECCCEEECCCC STEEHPPLDVLIISGGVHASEMKNKVVTDWIKGQSHSVKIIATVCTGIFFLAQAVQSLSC CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCEE KVTTHWEDIPDLRKMFSRLTVVDSVRWVDEGNIVSSGGISAGIDMSLYLVSRLHSEDLAA EEEECCCCCHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCHHHHHHHHHCCHHHHH KTAHQMEFAWTRNT HHHHHEEEEEECCC >Mature Secondary Structure MNIGIFIYNEAEVLDFSGPFEVFSTPSRLCDETAPFKVFLISEHNTVVTARAGYKVLPDY CCEEEEEECCCEEEECCCCHHHHCCCHHHHCCCCCEEEEEEECCCEEEEECCCEEECCCC STEEHPPLDVLIISGGVHASEMKNKVVTDWIKGQSHSVKIIATVCTGIFFLAQAVQSLSC CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCEE KVTTHWEDIPDLRKMFSRLTVVDSVRWVDEGNIVSSGGISAGIDMSLYLVSRLHSEDLAA EEEECCCCCHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCCCHHHHHHHHHCCHHHHH KTAHQMEFAWTRNT HHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA