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The map label for this gene is ynfA [C]

Identifier: 92114864

GI number: 92114864

Start: 3078993

End: 3079313

Strand: Direct

Name: ynfA [C]

Synonym: Csal_2746

Alternate gene names: 92114864

Gene position: 3078993-3079313 (Clockwise)

Preceding gene: 92114863

Following gene: 92114865

Centisome position: 83.29

GC content: 70.09

Gene sequence:

>321_bases
ATGCTGACCACGACGCTGCTGTTCATCGCCACCGCCATGGCCGAGATCATCGGCTGCTACCTCCCCTGGCTGTGGCTGCG
CCAGCAAGGCTCGCCCTGGCTGCTGGTACCCGCCGCCGCCAGCCTGACGCTGTTCGTCTGGCTGCTGAGCCTGCATCCCG
CGGCCAGCGGGCGTGTCTACGCCGCTTATGGCGGGGTCTACGTGGTCTGCGCGCTCGTCTGGCTATGGGGCGTGGATGGC
GAGGCCCTGCGGCCCACCGACTGGATCGGCGCCGCGCTCGCGCTGACCGGCATGGGCGTCATCGCCAGCGGGTGGCGATA
A

Upstream 100 bases:

>100_bases
TCACCGCCGGCCTGAACATCGCCGTCGACGCCATCGCCCGCCGTTACCGGCCTCGCGAGACCTCCTCCCATTGCGACCGC
CGTGTACCCGGAGACGCCGC

Downstream 100 bases:

>100_bases
CGAAACACCGTTCAACCTTACGTTTTACTGCGTTTCTCTACGGGCGAACCTGCTAGCTTCTGATGAAGCGAGGCGCACCC
CGAGACAGGGCGACCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MLTTTLLFIATAMAEIIGCYLPWLWLRQQGSPWLLVPAAASLTLFVWLLSLHPAASGRVYAAYGGVYVVCALVWLWGVDG
EALRPTDWIGAALALTGMGVIASGWR

Sequences:

>Translated_106_residues
MLTTTLLFIATAMAEIIGCYLPWLWLRQQGSPWLLVPAAASLTLFVWLLSLHPAASGRVYAAYGGVYVVCALVWLWGVDG
EALRPTDWIGAALALTGMGVIASGWR
>Mature_106_residues
MLTTTLLFIATAMAEIIGCYLPWLWLRQQGSPWLLVPAAASLTLFVWLLSLHPAASGRVYAAYGGVYVVCALVWLWGVDG
EALRPTDWIGAALALTGMGVIASGWR

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=105, Percent_Identity=67.6190476190476, Blast_Score=138, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2746_CHRSD (Q1QTW5)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_574792.1
- STRING:   Q1QTW5
- GeneID:   4028798
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_2746
- NMPDR:   fig|290398.4.peg.1451
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   MAILWLW
- BioCyc:   CSAL290398:CSAL_2746-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11450; Mature: 11450

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ab062d8)-; HASH(0x1b02c264)-; HASH(0x1a42a0f0)-; HASH(0x1b5397fc)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTTLLFIATAMAEIIGCYLPWLWLRQQGSPWLLVPAAASLTLFVWLLSLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVVCALVWLWGVDGEALRPTDWIGAALALTGMGVIASGWR
EECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCH
>Mature Secondary Structure
MLTTTLLFIATAMAEIIGCYLPWLWLRQQGSPWLLVPAAASLTLFVWLLSLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVVCALVWLWGVDGEALRPTDWIGAALALTGMGVIASGWR
EECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA