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The map label for this gene is nudL [H]

Identifier: 92114760

GI number: 92114760

Start: 2952275

End: 2952898

Strand: Direct

Name: nudL [H]

Synonym: Csal_2642

Alternate gene names: 92114760

Gene position: 2952275-2952898 (Clockwise)

Preceding gene: 92114758

Following gene: 92114761

Centisome position: 79.86

GC content: 66.99

Gene sequence:

>624_bases
ATGTTAGAGAAACTCCGCAAACGCCTGCAAGCGCATCACCCGCAATGCCTGAGTGTCGGCATGCCTCGGGCGGCGGTGCT
GTTGCCGATCGTCGCGCGCGAGGAGCCGACCTTGCTGCTGACGCGGCGTGCCGGACATCTCGCCCAGCACGGCGGCCAGG
TGGCCTTTCCCGGCGGCAAGGTCGAACCCGAGGATGCCGACCTGTGGGCCACGGCCCTGCGCGAGGCACGCGAGGAAATT
CAGCTGCCGCCATCACGGGTCGAGCCGCTGGGGCGGCTGAGCGATGTCATCTCGCGCCATGGCTTGTGCGTGACGCCGTT
CGTCGGGCTGATTCCGCCGAACTTGCCCTTGCAGCCGGACGGCAATGAACTCGACGCCATCTTCGAGGTGCCGCTGACCT
GGCTGCTCCAGGATCAGCGCAGCCATACCGATGCCATCCACCACGGCGAGCGGGTCTATTACGTGCCCAGCTATGCCTAT
CAGGACTATGTCATCTGGGGGCTCTCGGCCATGATGCTGGTCGAACTCCTGGCGGTCGGCTTCGCGCGACCGATCAGCCT
CGACCATGCGCCACCCGGCCGGCCCGTGCGCCATCTGGCGCCTCGCCCCACGTCACTGCCCTGA

Upstream 100 bases:

>100_bases
AAGAATGAATCGGCGATCGTCATGTCTCGCCTGTCGCGGCCGCATTGCGTAGACTCGACGTAATATCGCCTTCGTCACCT
ACGCCGCCATCGACCGCCTC

Downstream 100 bases:

>100_bases
GCCACTCACGAGTCCATCGCGCATGTCACGCCATACCGCCGCCGACTACCTCGATATCGCCGCCCTCCCCGCGCTGATGG
AGGCACTGGTCACGCAAGGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLEKLRKRLQAHHPQCLSVGMPRAAVLLPIVAREEPTLLLTRRAGHLAQHGGQVAFPGGKVEPEDADLWATALREAREEI
QLPPSRVEPLGRLSDVISRHGLCVTPFVGLIPPNLPLQPDGNELDAIFEVPLTWLLQDQRSHTDAIHHGERVYYVPSYAY
QDYVIWGLSAMMLVELLAVGFARPISLDHAPPGRPVRHLAPRPTSLP

Sequences:

>Translated_207_residues
MLEKLRKRLQAHHPQCLSVGMPRAAVLLPIVAREEPTLLLTRRAGHLAQHGGQVAFPGGKVEPEDADLWATALREAREEI
QLPPSRVEPLGRLSDVISRHGLCVTPFVGLIPPNLPLQPDGNELDAIFEVPLTWLLQDQRSHTDAIHHGERVYYVPSYAY
QDYVIWGLSAMMLVELLAVGFARPISLDHAPPGRPVRHLAPRPTSLP
>Mature_207_residues
MLEKLRKRLQAHHPQCLSVGMPRAAVLLPIVAREEPTLLLTRRAGHLAQHGGQVAFPGGKVEPEDADLWATALREAREEI
QLPPSRVEPLGRLSDVISRHGLCVTPFVGLIPPNLPLQPDGNELDAIFEVPLTWLLQDQRSHTDAIHHGERVYYVPSYAY
QDYVIWGLSAMMLVELLAVGFARPISLDHAPPGRPVRHLAPRPTSLP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=118, Percent_Identity=44.9152542372881, Blast_Score=89, Evalue=2e-18,
Organism=Escherichia coli, GI1788115, Length=177, Percent_Identity=44.6327683615819, Blast_Score=115, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17536993, Length=175, Percent_Identity=31.4285714285714, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17510677, Length=160, Percent_Identity=31.875, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI18859683, Length=154, Percent_Identity=31.1688311688312, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22980; Mature: 22980

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKLRKRLQAHHPQCLSVGMPRAAVLLPIVAREEPTLLLTRRAGHLAQHGGQVAFPGGK
CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHCCCEEECCCCC
VEPEDADLWATALREAREEIQLPPSRVEPLGRLSDVISRHGLCVTPFVGLIPPNLPLQPD
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCCCCCCC
GNELDAIFEVPLTWLLQDQRSHTDAIHHGERVYYVPSYAYQDYVIWGLSAMMLVELLAVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
FARPISLDHAPPGRPVRHLAPRPTSLP
CCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MLEKLRKRLQAHHPQCLSVGMPRAAVLLPIVAREEPTLLLTRRAGHLAQHGGQVAFPGGK
CHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHCCCEEECCCCC
VEPEDADLWATALREAREEIQLPPSRVEPLGRLSDVISRHGLCVTPFVGLIPPNLPLQPD
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCCCCCCC
GNELDAIFEVPLTWLLQDQRSHTDAIHHGERVYYVPSYAYQDYVIWGLSAMMLVELLAVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
FARPISLDHAPPGRPVRHLAPRPTSLP
CCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA