| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92114686
Identifier: 92114686
GI number: 92114686
Start: 2879382
End: 2880440
Strand: Direct
Name: 92114686
Synonym: Csal_2568
Alternate gene names: NA
Gene position: 2879382-2880440 (Clockwise)
Preceding gene: 92114685
Following gene: 92114693
Centisome position: 77.89
GC content: 63.46
Gene sequence:
>1059_bases ATGTCCGATGTGCGCGATACACTCTTTCGCTACCTGACCCTGCTGCAGCTGATTCCACGCAGCCCCGGCCGCATCGCCAC TCCCGTGCTGCTGGAGAAGCTCCGCGAGCGGGGCTTCAGGGTCGATGCTCGCTCGCTGCAACGGGATCTGCGCGACAAGC TGGCACTGCATTTCCCGCTGCTCTGTGACGACTCGCACAAACCCTTCCGCTGGTATTTCGACCGCCAATTTCAAAGCCAC CTGCCGGCGCTGGACCTGCCCAGCGCGCTTACCCTGGTGCTTGCCGAAGAACACCTCAAGGGGCTGTTGCCGCCCGTGGT CGTCGACCAGTTATCGCCTCAGTTCGCCGATGCCCACCGGGTGCTGGACGACTTGAGCGACAACGGCCTGAGCCAGTGGA CACAACGTGTGCGCGCCCTTCCCAATGGCAAGGCTCTCCTGCCCGCCGCCATCGACAATGCGGTATGGCAGTGCGTGGCA CAGGCCCTGCTGGAAAACCGGGCCCTCGAGGTCTGCTATCTGTCGCGCAGCCGCGAAAGCCATAAAACGCTGACCCTGCA TCCACAAGGCCTGGTCAGCCGGTACAGCGTGACCTATGTGGTGGCGACCGTGGGGGATTACGACGATATACGCCAATTCG CGCTGCATCGCATACGTCACGCGACCATCAGCCAGTGTCCGTGGCGCGCATCGCCAGGGTTCGACCTCGACGCCTACATC GCCGACGGCGCCTTCGGCTATCGGCAGACGCCCGATGATGTCGAGCTGGTCGCCAACGTTGCCCCACACGTCGCCTGGCT ACTCTCCGAGACACCGCTGTCGAACGAGCAACACCTCGAGCCTTTGGCGCATGGCGATTGGCAACGGCTCACCGCCACCC TGCCCGACGACCAGCAGACCCTCTGGTGGCTAAAGGGAATGGGGGCCAGCGTGGAGGTCGTCAAACCCGATACCTGGCGT GAGGAAATCCGCGACGATGCACGCCGGATTCTCGCTCGTGCTTCCTGCCGCACTTCCAGGGCACTCGATACTGTCGCCGA GGAAGAAAGCTCCCTCTGA
Upstream 100 bases:
>100_bases AGCAAGCAAATTCAGTGGTACTAAACCCCATGATGCTAAACAAAGTCAGGTAATAGCCGATAACGATATGTAATTAAACG TAATCAAAGGCGAGAATGTC
Downstream 100 bases:
>100_bases TCACGCCACCTTACAGACTCGGTGACAAAAAAAACCCCGCAAGGATGCGGGGTCAATCAGAGCAGGGATGGACTATCGCT GGCTCACACCAGCCGTCGCA
Product: transcriptional regulator-like protein
Products: NA
Alternate protein names: Transcriptional Factor; Transcriptional Factor MdcH
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSDVRDTLFRYLTLLQLIPRSPGRIATPVLLEKLRERGFRVDARSLQRDLRDKLALHFPLLCDDSHKPFRWYFDRQFQSH LPALDLPSALTLVLAEEHLKGLLPPVVVDQLSPQFADAHRVLDDLSDNGLSQWTQRVRALPNGKALLPAAIDNAVWQCVA QALLENRALEVCYLSRSRESHKTLTLHPQGLVSRYSVTYVVATVGDYDDIRQFALHRIRHATISQCPWRASPGFDLDAYI ADGAFGYRQTPDDVELVANVAPHVAWLLSETPLSNEQHLEPLAHGDWQRLTATLPDDQQTLWWLKGMGASVEVVKPDTWR EEIRDDARRILARASCRTSRALDTVAEEESSL
Sequences:
>Translated_352_residues MSDVRDTLFRYLTLLQLIPRSPGRIATPVLLEKLRERGFRVDARSLQRDLRDKLALHFPLLCDDSHKPFRWYFDRQFQSH LPALDLPSALTLVLAEEHLKGLLPPVVVDQLSPQFADAHRVLDDLSDNGLSQWTQRVRALPNGKALLPAAIDNAVWQCVA QALLENRALEVCYLSRSRESHKTLTLHPQGLVSRYSVTYVVATVGDYDDIRQFALHRIRHATISQCPWRASPGFDLDAYI ADGAFGYRQTPDDVELVANVAPHVAWLLSETPLSNEQHLEPLAHGDWQRLTATLPDDQQTLWWLKGMGASVEVVKPDTWR EEIRDDARRILARASCRTSRALDTVAEEESSL >Mature_351_residues SDVRDTLFRYLTLLQLIPRSPGRIATPVLLEKLRERGFRVDARSLQRDLRDKLALHFPLLCDDSHKPFRWYFDRQFQSHL PALDLPSALTLVLAEEHLKGLLPPVVVDQLSPQFADAHRVLDDLSDNGLSQWTQRVRALPNGKALLPAAIDNAVWQCVAQ ALLENRALEVCYLSRSRESHKTLTLHPQGLVSRYSVTYVVATVGDYDDIRQFALHRIRHATISQCPWRASPGFDLDAYIA DGAFGYRQTPDDVELVANVAPHVAWLLSETPLSNEQHLEPLAHGDWQRLTATLPDDQQTLWWLKGMGASVEVVKPDTWRE EIRDDARRILARASCRTSRALDTVAEEESSL
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39959; Mature: 39828
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVRDTLFRYLTLLQLIPRSPGRIATPVLLEKLRERGFRVDARSLQRDLRDKLALHFPL CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCE LCDDSHKPFRWYFDRQFQSHLPALDLPSALTLVLAEEHLKGLLPPVVVDQLSPQFADAHR EECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH VLDDLSDNGLSQWTQRVRALPNGKALLPAAIDNAVWQCVAQALLENRALEVCYLSRSRES HHHHHCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCC HKTLTLHPQGLVSRYSVTYVVATVGDYDDIRQFALHRIRHATISQCPWRASPGFDLDAYI CCEEEECCHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE ADGAFGYRQTPDDVELVANVAPHVAWLLSETPLSNEQHLEPLAHGDWQRLTATLPDDQQT ECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCHHHHEECCCCCHHH LWWLKGMGASVEVVKPDTWREEIRDDARRILARASCRTSRALDTVAEEESSL HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDVRDTLFRYLTLLQLIPRSPGRIATPVLLEKLRERGFRVDARSLQRDLRDKLALHFPL CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCE LCDDSHKPFRWYFDRQFQSHLPALDLPSALTLVLAEEHLKGLLPPVVVDQLSPQFADAHR EECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHH VLDDLSDNGLSQWTQRVRALPNGKALLPAAIDNAVWQCVAQALLENRALEVCYLSRSRES HHHHHCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCC HKTLTLHPQGLVSRYSVTYVVATVGDYDDIRQFALHRIRHATISQCPWRASPGFDLDAYI CCEEEECCHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE ADGAFGYRQTPDDVELVANVAPHVAWLLSETPLSNEQHLEPLAHGDWQRLTATLPDDQQT ECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHCCCHHHHEECCCCCHHH LWWLKGMGASVEVVKPDTWREEIRDDARRILARASCRTSRALDTVAEEESSL HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA