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The map label for this gene is vanB [H]

Identifier: 92114577

GI number: 92114577

Start: 2765846

End: 2766799

Strand: Direct

Name: vanB [H]

Synonym: Csal_2459

Alternate gene names: 92114577

Gene position: 2765846-2766799 (Clockwise)

Preceding gene: 92114576

Following gene: 92114578

Centisome position: 74.82

GC content: 69.29

Gene sequence:

>954_bases
ATGACCGCGACGCCATTCGAGGTCGTGATCGACAGCCACCAGCGGCTATCGAGCGCTATCTACCAGATCGAGTTGGTCGC
CGCCGATGGCGCCGCCCTGCCGCCGGCCCCGGCGGGCGCTCATCTCGAGGTGCGCCTCCCCAATGGCCTGATACGTCACT
ATTCGCTGCTGGACGACGCGCGTCACGGCCGCTATCGCATCGGCGTGCTGCATGACCCGGCATCCCGCGGGGGATCCGCC
TTCCTGGCCGAGCAGGCAAGCGTCGGTACGCGGCTGTGCGTCTCTGCGCCCCGGGACCGCTTTCCCCTCGCCGACGACCG
GCAGCACTACCGGCTGATCGGAGGCGGGATCGGCATCACGCCGCTCGTCGCCATGGCGCGCCGACTCGTCGAGCGGGGCG
ATACGGTCGAGGTGCATTACCTGGTACGTCACCGGGACGAGGCGGCGTTCCTCGACGAACTTCGCGCGTTCCTGCCCGCA
TCACAGTTGCACCTGCACGCCTCCGCCACGCAGGGAAGGCTCGCCCCGCGTGCGCTGCTGGGCGACTACACGCCGGAGAC
CGGGGTCTATGCCTGCGGCCCCGAAGGCCTGCTGGACGCCTTGACCGACGCGGCACGGGCGTGGCCTCCGGGCGCACTGC
AAATGGAACGCTTCCGCGGCGCATCGCAAGCGCCGGCAGCGCGTACCACGCCTTGCCGGATCGAGCTCGCGCGCAGCGAC
AAGCAGTTCACGCTCGCCGAGGACGAAACCCTGCTCGACGGTCTGGCGCGCGCCGGGGCGGCGCCGGACAGCCTGTGCTG
CGAAGGCGCCTGCGGCACCTGCGGTATCCCCGTGCTCGAAGGCGAGGTCGAGCATCGCGACGTTCTTCAGTCCGATGCCG
AAAAAGCCGCCAACGACATCATTTACGTCTGCGTTTCGCGTCCCAAGGGGGAGCGCCTGGTGCTCGACCTGTAA

Upstream 100 bases:

>100_bases
CAGCGACATGATCCTCGGCCACGCGCCTCCGGCGCCCTCGGATGCACCCTTCTGGCTGCATGACGACTGGCAGCACCAGC
AACGTTGAGGAGGACATGCC

Downstream 100 bases:

>100_bases
GGTCGGCGCGAGCGCTTTCCACGCCCATTCGACAATCGCCAAGGTATGGTCATGTCTTCCTCTCTCCTGTCCACCACCCA
CGCCGACTGGCAACACCGTG

Product: ferredoxin

Products: NA

Alternate protein names: Vanillate degradation ferredoxin-like protein [H]

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MTATPFEVVIDSHQRLSSAIYQIELVAADGAALPPAPAGAHLEVRLPNGLIRHYSLLDDARHGRYRIGVLHDPASRGGSA
FLAEQASVGTRLCVSAPRDRFPLADDRQHYRLIGGGIGITPLVAMARRLVERGDTVEVHYLVRHRDEAAFLDELRAFLPA
SQLHLHASATQGRLAPRALLGDYTPETGVYACGPEGLLDALTDAARAWPPGALQMERFRGASQAPAARTTPCRIELARSD
KQFTLAEDETLLDGLARAGAAPDSLCCEGACGTCGIPVLEGEVEHRDVLQSDAEKAANDIIYVCVSRPKGERLVLDL

Sequences:

>Translated_317_residues
MTATPFEVVIDSHQRLSSAIYQIELVAADGAALPPAPAGAHLEVRLPNGLIRHYSLLDDARHGRYRIGVLHDPASRGGSA
FLAEQASVGTRLCVSAPRDRFPLADDRQHYRLIGGGIGITPLVAMARRLVERGDTVEVHYLVRHRDEAAFLDELRAFLPA
SQLHLHASATQGRLAPRALLGDYTPETGVYACGPEGLLDALTDAARAWPPGALQMERFRGASQAPAARTTPCRIELARSD
KQFTLAEDETLLDGLARAGAAPDSLCCEGACGTCGIPVLEGEVEHRDVLQSDAEKAANDIIYVCVSRPKGERLVLDL
>Mature_316_residues
TATPFEVVIDSHQRLSSAIYQIELVAADGAALPPAPAGAHLEVRLPNGLIRHYSLLDDARHGRYRIGVLHDPASRGGSAF
LAEQASVGTRLCVSAPRDRFPLADDRQHYRLIGGGIGITPLVAMARRLVERGDTVEVHYLVRHRDEAAFLDELRAFLPAS
QLHLHASATQGRLAPRALLGDYTPETGVYACGPEGLLDALTDAARAWPPGALQMERFRGASQAPAARTTPCRIELARSDK
QFTLAEDETLLDGLARAGAAPDSLCCEGACGTCGIPVLEGEVEHRDVLQSDAEKAANDIIYVCVSRPKGERLVLDL

Specific function: Unknown

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=319, Percent_Identity=39.1849529780564, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787098, Length=320, Percent_Identity=23.125, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 34090; Mature: 33959

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATPFEVVIDSHQRLSSAIYQIELVAADGAALPPAPAGAHLEVRLPNGLIRHYSLLDDA
CCCCCHHHHHCCHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHC
RHGRYRIGVLHDPASRGGSAFLAEQASVGTRLCVSAPRDRFPLADDRQHYRLIGGGIGIT
CCCCEEEEEEECCCCCCCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHH
PLVAMARRLVERGDTVEVHYLVRHRDEAAFLDELRAFLPASQLHLHASATQGRLAPRALL
HHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCHHHHH
GDYTPETGVYACGPEGLLDALTDAARAWPPGALQMERFRGASQAPAARTTPCRIELARSD
CCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCC
KQFTLAEDETLLDGLARAGAAPDSLCCEGACGTCGIPVLEGEVEHRDVLQSDAEKAANDI
CEEEECCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCE
IYVCVSRPKGERLVLDL
EEEEECCCCCCEEEEEC
>Mature Secondary Structure 
TATPFEVVIDSHQRLSSAIYQIELVAADGAALPPAPAGAHLEVRLPNGLIRHYSLLDDA
CCCCHHHHHCCHHHHHHHHEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHC
RHGRYRIGVLHDPASRGGSAFLAEQASVGTRLCVSAPRDRFPLADDRQHYRLIGGGIGIT
CCCCEEEEEEECCCCCCCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCHH
PLVAMARRLVERGDTVEVHYLVRHRDEAAFLDELRAFLPASQLHLHASATQGRLAPRALL
HHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCHHHHH
GDYTPETGVYACGPEGLLDALTDAARAWPPGALQMERFRGASQAPAARTTPCRIELARSD
CCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCC
KQFTLAEDETLLDGLARAGAAPDSLCCEGACGTCGIPVLEGEVEHRDVLQSDAEKAANDI
CEEEECCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCE
IYVCVSRPKGERLVLDL
EEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3170489 [H]