| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is ykvO [H]
Identifier: 92114491
GI number: 92114491
Start: 2660098
End: 2660832
Strand: Direct
Name: ykvO [H]
Synonym: Csal_2371
Alternate gene names: 92114491
Gene position: 2660098-2660832 (Clockwise)
Preceding gene: 92114487
Following gene: 92114492
Centisome position: 71.96
GC content: 61.5
Gene sequence:
>735_bases ATGAGTCGGCTACACGGAAAAATTGCATTGATCACAGGCGGAGCCAGCGGCATCGGCTTGGCCTCGGCCCAACGCCTCAT CGACGAAGGCGCCTTCGTCTTCATTACCGGACGCCGCCAGGACGTCCTCGACAACGCAGCTGAGGCACTGGGATCCAACG CCCGGGCCGTCCAGGCGGATGTGACAAAGCCGGAGGATCTCGATCGCGTCTTCGACACGATCCAGAAAGCAAAGGGTCGC CTGGACGTCCTGGTGGCCAACGCAGGCGTCGGCGAATTCGCCAGCCTGGGCCAGATCACCGAGGAGCACTACGACTACAT CTTCGACATCAACGTCAAAGGCACCCTCTTCACCGTCCAGAAGGCCCTGCCCCTGATGACGAACGGCGGCTCCATCATCC TCACCGGTTCCACGGTCGGCAGCATGGGCACCCCCGCGATGAGCATCTACAGCGCCTCCAAGGCGGCTGTCCGAAACCTG GTGCGCAGTTGGGCCCATGATCTCAGGGGCACTGGCATTCGCGTAAACGTCATGTCTCCTGGCCCAACCAAAACAGACAA GCTGATGGAACTGCTCCCATCCGAAGCCCTGAGCGAAATGAATCGAACCGTACCGCTTGAGCGTCTGGGCGATCCCAAGG AAACCGCAGGCGCGGTGGCGTTCCTGGCGTCCGACGATAGCAGCTTCATGACGGGGAGCGAGGTGTTCGTTGATGGGGGC TACGCGCAGGTTTAG
Upstream 100 bases:
>100_bases CGCCATAACGGGTACTTACCAAAAGGTGCATACTTGAACATTTGTAAGCGGCTTATATACCTTGAAAGCGAATCAAGTCA ACACACACGGAGACCCAACC
Downstream 100 bases:
>100_bases ATGGCTGTCCCACAATTCCCTCGATGGAAGGAAAGAACATGAAGGCTGCATATTATGATGTTCCAGGCGGACCGGAGGTC CTGAGCTACACAGAAGTCGA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSRLHGKIALITGGASGIGLASAQRLIDEGAFVFITGRRQDVLDNAAEALGSNARAVQADVTKPEDLDRVFDTIQKAKGR LDVLVANAGVGEFASLGQITEEHYDYIFDINVKGTLFTVQKALPLMTNGGSIILTGSTVGSMGTPAMSIYSASKAAVRNL VRSWAHDLRGTGIRVNVMSPGPTKTDKLMELLPSEALSEMNRTVPLERLGDPKETAGAVAFLASDDSSFMTGSEVFVDGG YAQV
Sequences:
>Translated_244_residues MSRLHGKIALITGGASGIGLASAQRLIDEGAFVFITGRRQDVLDNAAEALGSNARAVQADVTKPEDLDRVFDTIQKAKGR LDVLVANAGVGEFASLGQITEEHYDYIFDINVKGTLFTVQKALPLMTNGGSIILTGSTVGSMGTPAMSIYSASKAAVRNL VRSWAHDLRGTGIRVNVMSPGPTKTDKLMELLPSEALSEMNRTVPLERLGDPKETAGAVAFLASDDSSFMTGSEVFVDGG YAQV >Mature_243_residues SRLHGKIALITGGASGIGLASAQRLIDEGAFVFITGRRQDVLDNAAEALGSNARAVQADVTKPEDLDRVFDTIQKAKGRL DVLVANAGVGEFASLGQITEEHYDYIFDINVKGTLFTVQKALPLMTNGGSIILTGSTVGSMGTPAMSIYSASKAAVRNLV RSWAHDLRGTGIRVNVMSPGPTKTDKLMELLPSEALSEMNRTVPLERLGDPKETAGAVAFLASDDSSFMTGSEVFVDGGY AQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=37.2950819672131, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=34.8178137651822, Blast_Score=127, Evalue=7e-30, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=34.7826086956522, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=34.156378600823, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=33.4745762711864, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=30.5555555555556, Blast_Score=110, Evalue=9e-25, Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=32.4, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=32.6612903225806, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=35.4497354497354, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=35.3591160220994, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=32.2709163346614, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI4503301, Length=246, Percent_Identity=29.6747967479675, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI223718074, Length=203, Percent_Identity=34.9753694581281, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI59889578, Length=191, Percent_Identity=32.9842931937173, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=29.2181069958848, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI209862901, Length=204, Percent_Identity=29.4117647058824, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI19923983, Length=204, Percent_Identity=29.4117647058824, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI83715985, Length=251, Percent_Identity=30.2788844621514, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI7657478, Length=208, Percent_Identity=30.2884615384615, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI4504505, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4503817, Length=216, Percent_Identity=26.3888888888889, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI31542939, Length=244, Percent_Identity=27.4590163934426, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI210032110, Length=183, Percent_Identity=28.9617486338798, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI119392083, Length=191, Percent_Identity=31.413612565445, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI109715829, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI40807363, Length=189, Percent_Identity=26.984126984127, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=34.9206349206349, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=35.3413654618474, Blast_Score=132, Evalue=1e-32, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=34.5679012345679, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=32.9218106995885, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=32.2448979591837, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=31.2, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=29.7959183673469, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=30.0411522633745, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=29.6747967479675, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=34.0782122905028, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=31.6872427983539, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787545, Length=262, Percent_Identity=30.1526717557252, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786701, Length=182, Percent_Identity=32.967032967033, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788891, Length=261, Percent_Identity=29.5019157088123, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787526, Length=238, Percent_Identity=27.3109243697479, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=26.8774703557312, Blast_Score=67, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=33.2, Blast_Score=130, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=34.6007604562738, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=31.7073170731707, Blast_Score=116, Evalue=9e-27, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=33.0612244897959, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=32.4110671936759, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=33.7078651685393, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=31.8007662835249, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=31.7164179104478, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17538486, Length=268, Percent_Identity=30.2238805970149, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=33.5907335907336, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=31.9391634980989, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=32.9365079365079, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=32.8063241106719, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=32.8301886792453, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=30.188679245283, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=30.5220883534137, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=31.0344827586207, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=31.4285714285714, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=31.0606060606061, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=31.3207547169811, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17538182, Length=249, Percent_Identity=32.5301204819277, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17551412, Length=270, Percent_Identity=31.1111111111111, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=30.3370786516854, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=30.9433962264151, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=32.0754716981132, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=30.3643724696356, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=27.3764258555133, Blast_Score=90, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=29.5019157088123, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=30.2040816326531, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17508895, Length=190, Percent_Identity=27.8947368421053, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17568967, Length=251, Percent_Identity=27.0916334661355, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17567345, Length=197, Percent_Identity=28.9340101522843, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193203117, Length=187, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193203115, Length=186, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=27.8225806451613, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71997099, Length=252, Percent_Identity=27.3809523809524, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6324126, Length=246, Percent_Identity=27.6422764227642, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323882, Length=195, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322067, Length=183, Percent_Identity=30.0546448087432, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322227, Length=236, Percent_Identity=26.271186440678, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322226, Length=185, Percent_Identity=28.6486486486486, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=36.0323886639676, Blast_Score=148, Evalue=3e-36, Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=35.6, Blast_Score=130, Evalue=7e-31, Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=34.6938775510204, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=34.8, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=34.4262295081967, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=31.6872427983539, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=31.25, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI24644337, Length=245, Percent_Identity=33.469387755102, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=29.4820717131474, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI116007236, Length=209, Percent_Identity=30.1435406698565, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI116007238, Length=191, Percent_Identity=29.3193717277487, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI116007234, Length=213, Percent_Identity=31.4553990610329, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24663911, Length=230, Percent_Identity=26.9565217391304, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI18859837, Length=252, Percent_Identity=28.1746031746032, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24641232, Length=207, Percent_Identity=28.0193236714976, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28571387, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI281364494, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640492, Length=179, Percent_Identity=28.4916201117318, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355631, Length=170, Percent_Identity=27.0588235294118, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24580925, Length=203, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI116007232, Length=196, Percent_Identity=30.6122448979592, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648944, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24641388, Length=217, Percent_Identity=30.8755760368664, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24648693, Length=203, Percent_Identity=29.5566502463054, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355889, Length=203, Percent_Identity=29.5566502463054, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281364892, Length=175, Percent_Identity=30.2857142857143, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221331218, Length=197, Percent_Identity=27.9187817258883, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24665243, Length=197, Percent_Identity=27.9187817258883, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25765; Mature: 25633
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLHGKIALITGGASGIGLASAQRLIDEGAFVFITGRRQDVLDNAAEALGSNARAVQAD CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEC VTKPEDLDRVFDTIQKAKGRLDVLVANAGVGEFASLGQITEEHYDYIFDINVKGTLFTVQ CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEHH KALPLMTNGGSIILTGSTVGSMGTPAMSIYSASKAAVRNLVRSWAHDLRGTGIRVNVMSP HHCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GPTKTDKLMELLPSEALSEMNRTVPLERLGDPKETAGAVAFLASDDSSFMTGSEVFVDGG CCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC YAQV CCCC >Mature Secondary Structure SRLHGKIALITGGASGIGLASAQRLIDEGAFVFITGRRQDVLDNAAEALGSNARAVQAD CCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEC VTKPEDLDRVFDTIQKAKGRLDVLVANAGVGEFASLGQITEEHYDYIFDINVKGTLFTVQ CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEEEHH KALPLMTNGGSIILTGSTVGSMGTPAMSIYSASKAAVRNLVRSWAHDLRGTGIRVNVMSP HHCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GPTKTDKLMELLPSEALSEMNRTVPLERLGDPKETAGAVAFLASDDSSFMTGSEVFVDGG CCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC YAQV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]