| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is ybeZ [H]
Identifier: 92114456
GI number: 92114456
Start: 2625319
End: 2626413
Strand: Direct
Name: ybeZ [H]
Synonym: Csal_2335
Alternate gene names: 92114456
Gene position: 2625319-2626413 (Clockwise)
Preceding gene: 92114455
Following gene: 92114457
Centisome position: 71.02
GC content: 65.11
Gene sequence:
>1095_bases ATGGATCCCCTCGAGTTGAGCCAGAACACTTCGCAGGCACATCGCATCCTCACCCTGACGCTCGAACCCAACGACCCCAT GCGCCTGGCCAGTCTGTGCGGGCAGCAGGACGAACACCTCAAGCTCGTCGAGACCCGCCTGGGCGTGACGCTGCGCAATC GCGGCAACACCTTTCAACTCGCGGGGCCGGGGTCGAGCGTCAAGGCCGCGGCCAACGTCGTCGAGCACCTCTACCGTGAG ACGGAAGCCAGCGAGCTGACACCCGATACCGTGCACCTGTTCCTGCAGGAATCCGGCCTCGAAGCGCTGGAGGAGGAAGA GGAAACCATCGACGAAGGCGGTGTCCTGCTGCGTACGCCACGCGCGCTGATCAAGCCGCGTGGCAACAACCAGCAGACCT ATGTCGCCAGCATTCGCGATCACGACATCAACTTCGGGATCGGACCGGCGGGGACCGGCAAGACCTACCTGGCGGTCGCG GCGGCGGTCGAGGCGCTCAACCAGCAGCAGGTGCGGCGCATCCTGCTGGTCCGTCCGGCGGTGGAAGCCGGCGAGCGACT GGGTTTCTTGCCGGGGGACCTGGCACAGAAGATCGACCCCTACCTGCGCCCGCTGTACGACGCCCTCTATGAAATGCTGG GCTTCGAGCAGGTCGGCAAGCTGATCGAGCGCCAGGTGATCGAGGTCGCTCCGCTGGCCTACATGCGCGGTCGCACGCTC AACAATGCCTTCATCATTCTCGACGAGAGCCAGAACACCACGCGCGAGCAGATGAAGATGTTCCTGACGCGTATCGGGTT CGGCTCCACCGCGGTGATTACCGGCGACATCACGCAGGTCGACCTGCCGCGCGGCAACCAGTCGGGGCTGATTCAGGTCC TCGACGTGCTCAAGGACACCCCGGGAATCGGCGTCACCCACTTCGTGGCCAAGGACGTGGTCCGCCACCCGCTGGTACAG CGCATCATCGAGGCCTACGATGCCTTCGAGAGCGCCGAGGAAGAACAGGAACGCACTCGCCGCGAGCGCCGCGCCCAGGC CAAGCGCGAAGAGAACGACGCGCGACGCGACAACGACGAGCCGACCAACGCATGA
Upstream 100 bases:
>100_bases GCGCGCTACTGACGTGCCATTCACCGCTCGGTGAAACCTTGCGCAAGATCATTGCCCCGGCGTTGTCCGGGGCGCTAAGC TGAATTCACACTTCCAACCC
Downstream 100 bases:
>100_bases CGCCCGACATCGATCGTCAGGTCGCCCTCGAGACGGCGACGGAACTTCTCCCCACCCAGGCCGATCTCGAGGCCTGGGTG GGGGCCGTGCTGGCGCGTCA
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDPLELSQNTSQAHRILTLTLEPNDPMRLASLCGQQDEHLKLVETRLGVTLRNRGNTFQLAGPGSSVKAAANVVEHLYRE TEASELTPDTVHLFLQESGLEALEEEEETIDEGGVLLRTPRALIKPRGNNQQTYVASIRDHDINFGIGPAGTGKTYLAVA AAVEALNQQQVRRILLVRPAVEAGERLGFLPGDLAQKIDPYLRPLYDALYEMLGFEQVGKLIERQVIEVAPLAYMRGRTL NNAFIILDESQNTTREQMKMFLTRIGFGSTAVITGDITQVDLPRGNQSGLIQVLDVLKDTPGIGVTHFVAKDVVRHPLVQ RIIEAYDAFESAEEEQERTRRERRAQAKREENDARRDNDEPTNA
Sequences:
>Translated_364_residues MDPLELSQNTSQAHRILTLTLEPNDPMRLASLCGQQDEHLKLVETRLGVTLRNRGNTFQLAGPGSSVKAAANVVEHLYRE TEASELTPDTVHLFLQESGLEALEEEEETIDEGGVLLRTPRALIKPRGNNQQTYVASIRDHDINFGIGPAGTGKTYLAVA AAVEALNQQQVRRILLVRPAVEAGERLGFLPGDLAQKIDPYLRPLYDALYEMLGFEQVGKLIERQVIEVAPLAYMRGRTL NNAFIILDESQNTTREQMKMFLTRIGFGSTAVITGDITQVDLPRGNQSGLIQVLDVLKDTPGIGVTHFVAKDVVRHPLVQ RIIEAYDAFESAEEEQERTRRERRAQAKREENDARRDNDEPTNA >Mature_364_residues MDPLELSQNTSQAHRILTLTLEPNDPMRLASLCGQQDEHLKLVETRLGVTLRNRGNTFQLAGPGSSVKAAANVVEHLYRE TEASELTPDTVHLFLQESGLEALEEEEETIDEGGVLLRTPRALIKPRGNNQQTYVASIRDHDINFGIGPAGTGKTYLAVA AAVEALNQQQVRRILLVRPAVEAGERLGFLPGDLAQKIDPYLRPLYDALYEMLGFEQVGKLIERQVIEVAPLAYMRGRTL NNAFIILDESQNTTREQMKMFLTRIGFGSTAVITGDITQVDLPRGNQSGLIQVLDVLKDTPGIGVTHFVAKDVVRHPLVQ RIIEAYDAFESAEEEQERTRRERRAQAKREENDARRDNDEPTNA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=344, Percent_Identity=58.7209302325581, Blast_Score=378, Evalue=1e-106, Organism=Escherichia coli, GI1787257, Length=240, Percent_Identity=43.3333333333333, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 40597; Mature: 40597
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLELSQNTSQAHRILTLTLEPNDPMRLASLCGQQDEHLKLVETRLGVTLRNRGNTFQL CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCEEEECCCCEEEE AGPGSSVKAAANVVEHLYRETEASELTPDTVHLFLQESGLEALEEEEETIDEGGVLLRTP ECCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECC RALIKPRGNNQQTYVASIRDHDINFGIGPAGTGKTYLAVAAAVEALNQQQVRRILLVRPA HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH VEAGERLGFLPGDLAQKIDPYLRPLYDALYEMLGFEQVGKLIERQVIEVAPLAYMRGRTL HHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC NNAFIILDESQNTTREQMKMFLTRIGFGSTAVITGDITQVDLPRGNQSGLIQVLDVLKDT CCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCC PGIGVTHFVAKDVVRHPLVQRIIEAYDAFESAEEEQERTRRERRAQAKREENDARRDNDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTNA CCCC >Mature Secondary Structure MDPLELSQNTSQAHRILTLTLEPNDPMRLASLCGQQDEHLKLVETRLGVTLRNRGNTFQL CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCEEEECCCCEEEE AGPGSSVKAAANVVEHLYRETEASELTPDTVHLFLQESGLEALEEEEETIDEGGVLLRTP ECCCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECC RALIKPRGNNQQTYVASIRDHDINFGIGPAGTGKTYLAVAAAVEALNQQQVRRILLVRPA HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH VEAGERLGFLPGDLAQKIDPYLRPLYDALYEMLGFEQVGKLIERQVIEVAPLAYMRGRTL HHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC NNAFIILDESQNTTREQMKMFLTRIGFGSTAVITGDITQVDLPRGNQSGLIQVLDVLKDT CCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHCC PGIGVTHFVAKDVVRHPLVQRIIEAYDAFESAEEEQERTRRERRAQAKREENDARRDNDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTNA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]