| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92114451
Identifier: 92114451
GI number: 92114451
Start: 2620219
End: 2621379
Strand: Direct
Name: 92114451
Synonym: Csal_2330
Alternate gene names: NA
Gene position: 2620219-2621379 (Clockwise)
Preceding gene: 92114450
Following gene: 92114452
Centisome position: 70.88
GC content: 69.68
Gene sequence:
>1161_bases ATGAGTCTCCCCATGCCCATTGCCTGGATCGCCCTCGCCGAGCTGTTCGGCACCGCCCTGTGGTTCACGCCCAATGCGGT GATCGGCGATCTGGAACGCGAATGGGCACTGGCCGCCCCCGACCTGGGGTGGCTGACCGGCGCCGTTCAGGTCGGTTTCT TCGTGGGCACGTTGATGATCGGTCTCAGCGGCATCGCCGACCGCCGCGATGCGAGCCGCCTGTTCGCCGCCTGCTGTCTG CTGGGTGCCCTCAGCAATGCCGCACTGCCCTGGGCCGGCGGCCTGTGGCCGGCGGTGGCACTGCGTCTGATCACCGGCAT GGCGCTGGCCGGCATCTACCCGGTGGGCATGAAACTCATGGTCGGCTGGGCGCCGCAGCGTGCCGGGCTGGGGCTGGCAT GGCTGGTGGGCATGCTGGTCGTCGGCACGGCACTGCCGCACTTGCTGGCCGGCGTCTCGCTCGGCGGCAACTGGCGCGGT GCGCTATGGAGCGCCTCGCTGCTGGCGCTTGTCGCGGGCGGGCTGGTGTGGCGCCTCGGCGAGGCGCCAGGCGTACGCAA GACGTCCCGGGACACGCCCCGCTGGGCGGGTCCCAGCGCCTTTCGCATCGCCGGGTTCCGGCACGCGGCAAGTGCTTACT TCGGTCACATGTGGGAGCTGTATACCCTGTGGGTCTTGATACCGCTATTGCTGGCCACGGCGCTTCCCGAGCTGACCAAG ACGCAACTGGCCTTCGGCAGTTTCGCGTTGATCGCCATCGGCGGACCGGGCTGCTGGCTGGGGGGCTGGCTGAGCCTGCG CCTGGGCAGCCGCCGCATCGCCCAGATCGGACTCGTCGGCTCGGCGGCCTGCTGCCTGCTCTATCCCTGGCTGGGCCTGC ATGGCGGACGTTGGGTCGCCCTGTTCCTGGGCCTCTGGAGCCTGTTCGCGGTCATCGATTCCCCGCACTTCTCGGCACTT TCGGCACGGGCCTGTCCGCCCTCTCTGGTCGGCAGCGCCCTGACCCTGCAAAACGCCATCGGCTTTGCGATATCGGCAGG TTCGCTGGCGTGGCTGCTGCCCGCCTGGTCATCGCTCGGCCCGTGGGTGGCCTGGCTGATGCTGCCCGGCCCGCTGCTGG GCCTGTGGGCATTGGCTCGAAAGGACGTCGCGAGCGGCTGA
Upstream 100 bases:
>100_bases CCGCGCCGGCGGCCTTGAGGTCCTTCGGTCGTCCCGGCCTCGACCATGGTGCCATCGACAGCTTCCGCGACGACTGGCAC AACGACGACTCCCCCTCGAC
Downstream 100 bases:
>100_bases GGGGGCCGCTATACTCGCCCAGACACCGTTGACACGGATTTCTCACTCCCAGATCAGGATACATGTCGAATATGCATCGG ACCCGTCGCATGGGGCACCT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; MFS Transporter; Transporter MSF Familly N_term Fragment; Facilitator Superfamily Permease; MFS Superfamily Transporter
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSLPMPIAWIALAELFGTALWFTPNAVIGDLEREWALAAPDLGWLTGAVQVGFFVGTLMIGLSGIADRRDASRLFAACCL LGALSNAALPWAGGLWPAVALRLITGMALAGIYPVGMKLMVGWAPQRAGLGLAWLVGMLVVGTALPHLLAGVSLGGNWRG ALWSASLLALVAGGLVWRLGEAPGVRKTSRDTPRWAGPSAFRIAGFRHAASAYFGHMWELYTLWVLIPLLLATALPELTK TQLAFGSFALIAIGGPGCWLGGWLSLRLGSRRIAQIGLVGSAACCLLYPWLGLHGGRWVALFLGLWSLFAVIDSPHFSAL SARACPPSLVGSALTLQNAIGFAISAGSLAWLLPAWSSLGPWVAWLMLPGPLLGLWALARKDVASG
Sequences:
>Translated_386_residues MSLPMPIAWIALAELFGTALWFTPNAVIGDLEREWALAAPDLGWLTGAVQVGFFVGTLMIGLSGIADRRDASRLFAACCL LGALSNAALPWAGGLWPAVALRLITGMALAGIYPVGMKLMVGWAPQRAGLGLAWLVGMLVVGTALPHLLAGVSLGGNWRG ALWSASLLALVAGGLVWRLGEAPGVRKTSRDTPRWAGPSAFRIAGFRHAASAYFGHMWELYTLWVLIPLLLATALPELTK TQLAFGSFALIAIGGPGCWLGGWLSLRLGSRRIAQIGLVGSAACCLLYPWLGLHGGRWVALFLGLWSLFAVIDSPHFSAL SARACPPSLVGSALTLQNAIGFAISAGSLAWLLPAWSSLGPWVAWLMLPGPLLGLWALARKDVASG >Mature_385_residues SLPMPIAWIALAELFGTALWFTPNAVIGDLEREWALAAPDLGWLTGAVQVGFFVGTLMIGLSGIADRRDASRLFAACCLL GALSNAALPWAGGLWPAVALRLITGMALAGIYPVGMKLMVGWAPQRAGLGLAWLVGMLVVGTALPHLLAGVSLGGNWRGA LWSASLLALVAGGLVWRLGEAPGVRKTSRDTPRWAGPSAFRIAGFRHAASAYFGHMWELYTLWVLIPLLLATALPELTKT QLAFGSFALIAIGGPGCWLGGWLSLRLGSRRIAQIGLVGSAACCLLYPWLGLHGGRWVALFLGLWSLFAVIDSPHFSALS ARACPPSLVGSALTLQNAIGFAISAGSLAWLLPAWSSLGPWVAWLMLPGPLLGLWALARKDVASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40613; Mature: 40481
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPMPIAWIALAELFGTALWFTPNAVIGDLEREWALAAPDLGWLTGAVQVGFFVGTLMI CCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GLSGIADRRDASRLFAACCLLGALSNAALPWAGGLWPAVALRLITGMALAGIYPVGMKLM HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE VGWAPQRAGLGLAWLVGMLVVGTALPHLLAGVSLGGNWRGALWSASLLALVAGGLVWRLG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECC EAPGVRKTSRDTPRWAGPSAFRIAGFRHAASAYFGHMWELYTLWVLIPLLLATALPELTK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TQLAFGSFALIAIGGPGCWLGGWLSLRLGSRRIAQIGLVGSAACCLLYPWLGLHGGRWVA HHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH LFLGLWSLFAVIDSPHFSALSARACPPSLVGSALTLQNAIGFAISAGSLAWLLPAWSSLG HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH PWVAWLMLPGPLLGLWALARKDVASG HHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLPMPIAWIALAELFGTALWFTPNAVIGDLEREWALAAPDLGWLTGAVQVGFFVGTLMI CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GLSGIADRRDASRLFAACCLLGALSNAALPWAGGLWPAVALRLITGMALAGIYPVGMKLM HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE VGWAPQRAGLGLAWLVGMLVVGTALPHLLAGVSLGGNWRGALWSASLLALVAGGLVWRLG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECC EAPGVRKTSRDTPRWAGPSAFRIAGFRHAASAYFGHMWELYTLWVLIPLLLATALPELTK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TQLAFGSFALIAIGGPGCWLGGWLSLRLGSRRIAQIGLVGSAACCLLYPWLGLHGGRWVA HHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH LFLGLWSLFAVIDSPHFSALSARACPPSLVGSALTLQNAIGFAISAGSLAWLLPAWSSLG HHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH PWVAWLMLPGPLLGLWALARKDVASG HHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA