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The map label for this gene is clpV1 [H]

Identifier: 92114394

GI number: 92114394

Start: 2555012

End: 2557681

Strand: Direct

Name: clpV1 [H]

Synonym: Csal_2273

Alternate gene names: 92114394

Gene position: 2555012-2557681 (Clockwise)

Preceding gene: 92114393

Following gene: 92114395

Centisome position: 69.12

GC content: 64.72

Gene sequence:

>2670_bases
GTGAGTCTCAAATCCCTCTTCGACAAACTCAACGATCCCTGCCGCGAGGCCACTGAAGGCGCCGCCGCGCTATGCCTGGC
GGAGCGCCAGTACGACGTGGACATCGAACACCTGTTGCTCAAGCTGCTCGACAGCGACGACAACGATTTCCTGCGCATCG
CACGGCACTACGACGTGTCGCTCGATCGCCTGGCGACCCAGCTCGAGGACACGGTGTCCACCTTCAAGACCGGCAATACC
CGAACGCCTGCCCTGTCGCCACGCATCACTCGGCTGATCGAGCGTGCCTGGGTCATCGCCTCGATCGATCATGGCGAAGC
CCAGATTCGCAGCGGCCACCTGCTGCTGGCATTGCTGAAGGACGATGAACTGCGCCGCGTACTGCTCGATGGGGCCCGTG
AGCTGGAACGCATCAATGTCGACGACCTGCAGGCACACCTCGATGACCTGATCGGGGGCAGCAGCGAAGATCAGTACGTA
CGCCCGCTCGGCGAAGGAGCGAACGAGGATGGCCAGAGCGCTCGCCAGGCATCGGACGCCAGGAGCGAAGGCAGTCGCTC
CGGCAAGAGCAAGACCCCGGCGCTGGATCAATACACCATCGACCTGACCGGCAACGCCCGCGCCGGTCGCATCGACCCGG
TGCTCGGCCGCGAGGAAGAAGTGCGCCAGATGGTGGACATCCTCACCCGGCGTCGCCAGAACAACCCGATCCTCACCGGG
GAGGCCGGCGTCGGCAAGACCGCCGTGGTCGAAGGCCTGGCACTGCGCATCGTCGACGGCGATGTACCGCCACCGCTCAA
GAACGTCGAGCTGCGCACGCTCGATCTGGGGCTTCTGCAAGCCGGCGCCGGGGTCAAGGGCGAGTTCGAGAACCGGCTCA
AGAACGTGATCGAGGAAACCAGGCGCAGCCTGCACCCGATCATCCTGTTCATCGACGAGGCCCACACCCTGATCGGCAGC
GGCGGACAGGCCGGTCAGGGCGATGCCGCCAACCTGCTCAAGCCGGCGCTGGCACGCGGGGAGCTGCGCACCATCGCCGC
CACCACCTGGGCGGAATTCAAGAAGTACTTCGAGAAGGACGCCGCGCTGGCCCGTCGCTTTCAGGTCGTCAAGGTCGAGG
AACCGGCCGAACCGGTGGCCATCAACATGCTGCGCGGTCTGAACGAGCGCATGCAGGACCACCACAAGGTGACCATTCTC
GATGACGCCATCGTCCAGGCCGTACGCCTGTCGCACCGCTACATCACTGGCCGCCAGTTGCCGGACAAGGCCGTCAGCGT
GCTCGATACCGCCTGCGCGCGGGTCGCCCTGGCACAATCGTCGCAGCCGGCGGCGCTCGAAGATGCCTACCGCCGCGTCG
ACAACCTCAACAGCGAGATTGCCGTTCTCCAGCGCGAACAGCGTGAAGGCAGCGATCACGCCGAAACGCTGGCCGCGCTC
GACGAACAGCTTACCGCGACCCAGGGCGAGATAGACGACCTGCGCGCACGCTGGGAGCGCGAGCAGGAGATCGTGACGCG
CCTCAAAGCGCTGGAAGCGGAACGCGAAGCCATCGAGGCCGGCCAGCAAAGCGGCGATGTCGACGCGTTGAGCCGGCAGA
TCGGCGAGGTCCGGCGCGAACTGGCCGAGGTCCAGGGCGAGCACTCGCTGGTCCACGGCCATGTCGACGGCAACGTGATC
GCCGAGGTGATTTCCAACTGGACCGGCATTCCACTCGGCAAGATGATGCGCGACGAGATCGCCACCGTGCAGCGCCTCCC
CGAACTGCTCGGCGAGCGCGTGCTGGGCCAGGACCATGCGCTGGCCGAGATCGGCAAGCGCATCGCGATCTCGCGGGCCC
GGATGGAGGACCCCAACAAGCCGATCGGAGTCTTCCTGCTGCTCGGCCCCAGCGGCGTCGGCAAGACCGAAACCGCGCTG
TCGCTGGCCGATACTCTCTACGGTGGTGAACGTAACGTCATCACCATCAACATGTCCGAATATCAGGAGGCGCATACCGT
CTCCAGCCTCAAGGGCTCACCTCCCGGGTACGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAAGCGGTGCGCCGCAAGC
CCTACAGCGTGGTACTGCTGGATGAAGTCGAGAAAGCGCACCCGGACGTGCTGGAGCTGTTCTTCCAGGTGTTCGACAAG
GGCGTGCTGGACGACGGCGAAGGCCGCGAGATCAACTTCCGCAACACCGTGATCCTGCTCACGTCCAACGTCGGTACCGA
CGACATCATGCAGCAGTGTCTGGGCGCCGAGTCCCTGCCCGCCCCGGGTGCGATCGTCGACAGCCTGCGCGATCAGCTCA
ACGCCGTGTTCAAGCCGGCGTTTTTGGGCCGTTTGAACATCATTCCCTACTACCCGGTGCAGAAAGAGATTCTGCACAAC
ATCGTTCGGCTCAAGCTCGACCGCATCAAGCATCGCTTCGAATACAACCACCGCGCCGACTTCGACTACGATCCGGCGAT
CATCGAAGCCATCGCCGAGCGCTGCACCGACAGCGACAGCGGTGCGCGCAATATCGACAACATTCTCTCCGGCAGCCTGA
TGCCGACCATCGCCACGCAGGTACTGGACCGCATGGCCAGCGGTGAATCCATCGAACAGCTCACGGTCAGCCTCGACGCT
CAGGGGGAGTTCGCATATGCCCTGCGCTGA

Upstream 100 bases:

>100_bases
ACGTCAGCCTGGGACGCCTGGGTTGGCTCAACTCGAGTGATCGACCGGCCGTCTCCCACGGCCATGCACTCTTCGACATT
CCCTTTGATGGAGCCACGGC

Downstream 100 bases:

>100_bases
GACCGCATCTAGCGACAAAGCCAACGAGGTAGAGTCATGGCAGATTTAGCAATGCTGGACAGTTTACTGGATAGCTTCGA
TATCGATCTTTCGCAGTCGC

Product: ATPase AAA-2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 889; Mature: 888

Protein sequence:

>889_residues
MSLKSLFDKLNDPCREATEGAAALCLAERQYDVDIEHLLLKLLDSDDNDFLRIARHYDVSLDRLATQLEDTVSTFKTGNT
RTPALSPRITRLIERAWVIASIDHGEAQIRSGHLLLALLKDDELRRVLLDGARELERINVDDLQAHLDDLIGGSSEDQYV
RPLGEGANEDGQSARQASDARSEGSRSGKSKTPALDQYTIDLTGNARAGRIDPVLGREEEVRQMVDILTRRRQNNPILTG
EAGVGKTAVVEGLALRIVDGDVPPPLKNVELRTLDLGLLQAGAGVKGEFENRLKNVIEETRRSLHPIILFIDEAHTLIGS
GGQAGQGDAANLLKPALARGELRTIAATTWAEFKKYFEKDAALARRFQVVKVEEPAEPVAINMLRGLNERMQDHHKVTIL
DDAIVQAVRLSHRYITGRQLPDKAVSVLDTACARVALAQSSQPAALEDAYRRVDNLNSEIAVLQREQREGSDHAETLAAL
DEQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAGQQSGDVDALSRQIGEVRRELAEVQGEHSLVHGHVDGNVI
AEVISNWTGIPLGKMMRDEIATVQRLPELLGERVLGQDHALAEIGKRIAISRARMEDPNKPIGVFLLLGPSGVGKTETAL
SLADTLYGGERNVITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDK
GVLDDGEGREINFRNTVILLTSNVGTDDIMQQCLGAESLPAPGAIVDSLRDQLNAVFKPAFLGRLNIIPYYPVQKEILHN
IVRLKLDRIKHRFEYNHRADFDYDPAIIEAIAERCTDSDSGARNIDNILSGSLMPTIATQVLDRMASGESIEQLTVSLDA
QGEFAYALR

Sequences:

>Translated_889_residues
MSLKSLFDKLNDPCREATEGAAALCLAERQYDVDIEHLLLKLLDSDDNDFLRIARHYDVSLDRLATQLEDTVSTFKTGNT
RTPALSPRITRLIERAWVIASIDHGEAQIRSGHLLLALLKDDELRRVLLDGARELERINVDDLQAHLDDLIGGSSEDQYV
RPLGEGANEDGQSARQASDARSEGSRSGKSKTPALDQYTIDLTGNARAGRIDPVLGREEEVRQMVDILTRRRQNNPILTG
EAGVGKTAVVEGLALRIVDGDVPPPLKNVELRTLDLGLLQAGAGVKGEFENRLKNVIEETRRSLHPIILFIDEAHTLIGS
GGQAGQGDAANLLKPALARGELRTIAATTWAEFKKYFEKDAALARRFQVVKVEEPAEPVAINMLRGLNERMQDHHKVTIL
DDAIVQAVRLSHRYITGRQLPDKAVSVLDTACARVALAQSSQPAALEDAYRRVDNLNSEIAVLQREQREGSDHAETLAAL
DEQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAGQQSGDVDALSRQIGEVRRELAEVQGEHSLVHGHVDGNVI
AEVISNWTGIPLGKMMRDEIATVQRLPELLGERVLGQDHALAEIGKRIAISRARMEDPNKPIGVFLLLGPSGVGKTETAL
SLADTLYGGERNVITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDK
GVLDDGEGREINFRNTVILLTSNVGTDDIMQQCLGAESLPAPGAIVDSLRDQLNAVFKPAFLGRLNIIPYYPVQKEILHN
IVRLKLDRIKHRFEYNHRADFDYDPAIIEAIAERCTDSDSGARNIDNILSGSLMPTIATQVLDRMASGESIEQLTVSLDA
QGEFAYALR
>Mature_888_residues
SLKSLFDKLNDPCREATEGAAALCLAERQYDVDIEHLLLKLLDSDDNDFLRIARHYDVSLDRLATQLEDTVSTFKTGNTR
TPALSPRITRLIERAWVIASIDHGEAQIRSGHLLLALLKDDELRRVLLDGARELERINVDDLQAHLDDLIGGSSEDQYVR
PLGEGANEDGQSARQASDARSEGSRSGKSKTPALDQYTIDLTGNARAGRIDPVLGREEEVRQMVDILTRRRQNNPILTGE
AGVGKTAVVEGLALRIVDGDVPPPLKNVELRTLDLGLLQAGAGVKGEFENRLKNVIEETRRSLHPIILFIDEAHTLIGSG
GQAGQGDAANLLKPALARGELRTIAATTWAEFKKYFEKDAALARRFQVVKVEEPAEPVAINMLRGLNERMQDHHKVTILD
DAIVQAVRLSHRYITGRQLPDKAVSVLDTACARVALAQSSQPAALEDAYRRVDNLNSEIAVLQREQREGSDHAETLAALD
EQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAGQQSGDVDALSRQIGEVRRELAEVQGEHSLVHGHVDGNVIA
EVISNWTGIPLGKMMRDEIATVQRLPELLGERVLGQDHALAEIGKRIAISRARMEDPNKPIGVFLLLGPSGVGKTETALS
LADTLYGGERNVITINMSEYQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKG
VLDDGEGREINFRNTVILLTSNVGTDDIMQQCLGAESLPAPGAIVDSLRDQLNAVFKPAFLGRLNIIPYYPVQKEILHNI
VRLKLDRIKHRFEYNHRADFDYDPAIIEAIAERCTDSDSGARNIDNILSGSLMPTIATQVLDRMASGESIEQLTVSLDAQ
GEFAYALR

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=317, Percent_Identity=33.1230283911672, Blast_Score=156, Evalue=7e-38,
Organism=Escherichia coli, GI1788943, Length=721, Percent_Identity=41.747572815534, Blast_Score=535, Evalue=1e-153,
Organism=Escherichia coli, GI1787109, Length=439, Percent_Identity=35.7630979498861, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=694, Percent_Identity=40.3458213256484, Blast_Score=483, Evalue=1e-137,
Organism=Saccharomyces cerevisiae, GI6323002, Length=700, Percent_Identity=37.4285714285714, Blast_Score=454, Evalue=1e-128,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 97954; Mature: 97823

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00870 CLPAB_1 ; PS00871 CLPAB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKSLFDKLNDPCREATEGAAALCLAERQYDVDIEHLLLKLLDSDDNDFLRIARHYDVS
CCHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCH
LDRLATQLEDTVSTFKTGNTRTPALSPRITRLIERAWVIASIDHGEAQIRSGHLLLALLK
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHEECCCEEEEEEC
DDELRRVLLDGARELERINVDDLQAHLDDLIGGSSEDQYVRPLGEGANEDGQSARQASDA
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHH
RSEGSRSGKSKTPALDQYTIDLTGNARAGRIDPVLGREEEVRQMVDILTRRRQNNPILTG
HHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEC
EAGVGKTAVVEGLALRIVDGDVPPPLKNVELRTLDLGLLQAGAGVKGEFENRLKNVIEET
CCCCCHHHHHHCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHH
RRSLHPIILFIDEAHTLIGSGGQAGQGDAANLLKPALARGELRTIAATTWAEFKKYFEKD
HHCCCCEEEEEECHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AALARRFQVVKVEEPAEPVAINMLRGLNERMQDHHKVTILDDAIVQAVRLSHRYITGRQL
HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCC
PDKAVSVLDTACARVALAQSSQPAALEDAYRRVDNLNSEIAVLQREQREGSDHAETLAAL
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
DEQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAGQQSGDVDALSRQIGEVRRE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LAEVQGEHSLVHGHVDGNVIAEVISNWTGIPLGKMMRDEIATVQRLPELLGERVLGQDHA
HHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LAEIGKRIAISRARMEDPNKPIGVFLLLGPSGVGKTETALSLADTLYGGERNVITINMSE
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHH
YQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDK
HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCC
GVLDDGEGREINFRNTVILLTSNVGTDDIMQQCLGAESLPAPGAIVDSLRDQLNAVFKPA
CCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLGRLNIIPYYPVQKEILHNIVRLKLDRIKHRFEYNHRADFDYDPAIIEAIAERCTDSDS
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
GARNIDNILSGSLMPTIATQVLDRMASGESIEQLTVSLDAQGEFAYALR
CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCEEEECC
>Mature Secondary Structure 
SLKSLFDKLNDPCREATEGAAALCLAERQYDVDIEHLLLKLLDSDDNDFLRIARHYDVS
CHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCH
LDRLATQLEDTVSTFKTGNTRTPALSPRITRLIERAWVIASIDHGEAQIRSGHLLLALLK
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHEECCCEEEEEEC
DDELRRVLLDGARELERINVDDLQAHLDDLIGGSSEDQYVRPLGEGANEDGQSARQASDA
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHH
RSEGSRSGKSKTPALDQYTIDLTGNARAGRIDPVLGREEEVRQMVDILTRRRQNNPILTG
HHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEC
EAGVGKTAVVEGLALRIVDGDVPPPLKNVELRTLDLGLLQAGAGVKGEFENRLKNVIEET
CCCCCHHHHHHCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHH
RRSLHPIILFIDEAHTLIGSGGQAGQGDAANLLKPALARGELRTIAATTWAEFKKYFEKD
HHCCCCEEEEEECHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AALARRFQVVKVEEPAEPVAINMLRGLNERMQDHHKVTILDDAIVQAVRLSHRYITGRQL
HHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCC
PDKAVSVLDTACARVALAQSSQPAALEDAYRRVDNLNSEIAVLQREQREGSDHAETLAAL
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
DEQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAGQQSGDVDALSRQIGEVRRE
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LAEVQGEHSLVHGHVDGNVIAEVISNWTGIPLGKMMRDEIATVQRLPELLGERVLGQDHA
HHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LAEIGKRIAISRARMEDPNKPIGVFLLLGPSGVGKTETALSLADTLYGGERNVITINMSE
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHH
YQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDK
HHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCC
GVLDDGEGREINFRNTVILLTSNVGTDDIMQQCLGAESLPAPGAIVDSLRDQLNAVFKPA
CCCCCCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
FLGRLNIIPYYPVQKEILHNIVRLKLDRIKHRFEYNHRADFDYDPAIIEAIAERCTDSDS
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
GARNIDNILSGSLMPTIATQVLDRMASGESIEQLTVSLDAQGEFAYALR
CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]