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The map label for this gene is 92114389

Identifier: 92114389

GI number: 92114389

Start: 2549491

End: 2550024

Strand: Direct

Name: 92114389

Synonym: Csal_2268

Alternate gene names: NA

Gene position: 2549491-2550024 (Clockwise)

Preceding gene: 92114388

Following gene: 92114390

Centisome position: 68.97

GC content: 59.74

Gene sequence:

>534_bases
ATGGCCAAGAACGAAAGCACCCAGCACAAACTTTCCCGCGTGAGGGCACCCCGTGTGCACCTGACCTATGACGTCGAGAT
CGGCGACAGCATCGAGAAGAAGGAGCTGCCGTTCGTGGTCGGTGTCATGGGCGACTATTCGGGCAACCCGCTCGAGCCGC
TGCCGCGCCTGAAGGACCGCAAGTTCGTCAACATCGACCGTGACAACTTCGACAGCGTCATGAAGGGCATCAAGCCGCGA
CTGAGCTATCGCGTCGACAACACGCTCGCCAACGACGGCTCGCAGCTTCCGGTGGAGCTCAACTTCAAGCGAATGGAAGA
TTTCGAGCCCCAGGAGGTCGTGCGCCAGGTCGAGCCGTTGCGCAAGCTGCTCGAGGTTCGCAACAAGCTGGCAGACCTGC
GCAACAAGATGGGCGGCAACGACAAGCTCGAAGAACTGTTGATGGACGTTCTTCAGAACACCGACAAGCTGCAGACCCTG
GGCGAAGAGCTGGGTCGGGAAGCGGCTGCGAAACCGCAGGACGAAAAGGAATAA

Upstream 100 bases:

>100_bases
GTGAACGATTGATGCGAGCGCTTCGAGAAGCGACGTCCCGCTGACAGACACGAGTACTCGACTCCACCACGCTCTCACTA
TATCGAAAGAGGATCTTTGC

Downstream 100 bases:

>100_bases
CGGGGGTTCTCATGGCCGACAATCAGACCGACAAGACATCTCAGACCGACAGCCAGGAAGTTTTCGCACCGGAAACATCA
CTGCTGGACAGCATCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAKNESTQHKLSRVRAPRVHLTYDVEIGDSIEKKELPFVVGVMGDYSGNPLEPLPRLKDRKFVNIDRDNFDSVMKGIKPR
LSYRVDNTLANDGSQLPVELNFKRMEDFEPQEVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTDKLQTL
GEELGREAAAKPQDEKE

Sequences:

>Translated_177_residues
MAKNESTQHKLSRVRAPRVHLTYDVEIGDSIEKKELPFVVGVMGDYSGNPLEPLPRLKDRKFVNIDRDNFDSVMKGIKPR
LSYRVDNTLANDGSQLPVELNFKRMEDFEPQEVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTDKLQTL
GEELGREAAAKPQDEKE
>Mature_176_residues
AKNESTQHKLSRVRAPRVHLTYDVEIGDSIEKKELPFVVGVMGDYSGNPLEPLPRLKDRKFVNIDRDNFDSVMKGIKPRL
SYRVDNTLANDGSQLPVELNFKRMEDFEPQEVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTDKLQTLG
EELGREAAAKPQDEKE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20328; Mature: 20197

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNESTQHKLSRVRAPRVHLTYDVEIGDSIEKKELPFVVGVMGDYSGNPLEPLPRLKDR
CCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC
KFVNIDRDNFDSVMKGIKPRLSYRVDNTLANDGSQLPVELNFKRMEDFEPQEVVRQVEPL
CEEECCCCCHHHHHHCCCHHHHHHHCCHHHCCCCCCCEEECHHHCCCCCHHHHHHHHHHH
RKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTDKLQTLGEELGREAAAKPQDEKE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKNESTQHKLSRVRAPRVHLTYDVEIGDSIEKKELPFVVGVMGDYSGNPLEPLPRLKDR
CCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC
KFVNIDRDNFDSVMKGIKPRLSYRVDNTLANDGSQLPVELNFKRMEDFEPQEVVRQVEPL
CEEECCCCCHHHHHHCCCHHHHHHHCCHHHCCCCCCCEEECHHHCCCCCHHHHHHHHHHH
RKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTDKLQTLGEELGREAAAKPQDEKE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA