| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92114387
Identifier: 92114387
GI number: 92114387
Start: 2547783
End: 2548430
Strand: Direct
Name: 92114387
Synonym: Csal_2266
Alternate gene names: NA
Gene position: 2547783-2548430 (Clockwise)
Preceding gene: 92114380
Following gene: 92114388
Centisome position: 68.92
GC content: 52.62
Gene sequence:
>648_bases ATGGCTGATGCCATCAGGCATCTAAGAAAAATACTCAAGCCACTCCCTCAATCGGACGACACCTTACCAGAGTTAGGCGT TATAATAAGTACCAAATTTAACATTTCCTTATGTCGCTACATTTATTTACAAACGAGATACAAGATGACAAAACTCATGC ATCGCCACCTGCCGGTACTCATCTCTCTCTCACTTACCGCCTGCGCGGGCGCACCGCAGACACAGGTGGACTATGTACCG CCCACCGTGAAGTTCGAAGGTACCTTGCCTTGCGATGACTGCAGCGGCATCGACACGACACTCGTATTGAAGCGCAACAC CGTTACCAGAGAGCCTGACGGCTTCTACCTTCACGAGGTGCGACTAGATGCACCCGGCGGCGAACGTGTCGACACAAGCT GGGGAAACTGGACGAAAAGTCGCGATATTGCCGACTTCCAACGGCGGATCTACGTACTGCAACCCGAGAACGGCACCGCC CGCGTCTACATCCCTCGTGACAATGGCGACTTGCAGCCACTGGGTTCACAAGGCAGCCCACTTACCAATGACGAAGGAGA GAGCATCTTGCTGCGTCGCATGACACCAGAACTGTCTCTATCGTCCAGCGATACGAATAACGAGAGTCTCGAAGACAGTG ACGGATAA
Upstream 100 bases:
>100_bases CCGTGACCGAAAGCAGAAGTAATAGCATTCCCCAATTGCGTATGGACGCTCTCATTGCCGTCTCATTCACTCTTTCAGCT TAGCCAGTGGAAGGCCTGCA
Downstream 100 bases:
>100_bases GCAACGACTTATGCTAAGGTAATGCATGAACTGGTTCAGCCCCTTTTGTAAGAGATGACCTACAAAACCAATAGTGCATC ACTGAAGTGCCGCTTACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVLISLSLTACAGAPQTQVDYVP PTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEVRLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTA RVYIPRDNGDLQPLGSQGSPLTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG
Sequences:
>Translated_215_residues MADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVLISLSLTACAGAPQTQVDYVP PTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEVRLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTA RVYIPRDNGDLQPLGSQGSPLTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG >Mature_214_residues ADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVLISLSLTACAGAPQTQVDYVPP TVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEVRLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTAR VYIPRDNGDLQPLGSQGSPLTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG
Specific function: Unknown
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24077; Mature: 23945
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVL CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEE ISLSLTACAGAPQTQVDYVPPTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEV EEEEEHHCCCCCCCEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEE RLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTARVYIPRDNGDLQPLGSQGSP EEECCCCCEEECCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC LTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG CCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure ADAIRHLRKILKPLPQSDDTLPELGVIISTKFNISLCRYIYLQTRYKMTKLMHRHLPVL HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEE ISLSLTACAGAPQTQVDYVPPTVKFEGTLPCDDCSGIDTTLVLKRNTVTREPDGFYLHEV EEEEEHHCCCCCCCEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEE RLDAPGGERVDTSWGNWTKSRDIADFQRRIYVLQPENGTARVYIPRDNGDLQPLGSQGSP EEECCCCCEEECCCCCCCCCCCHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC LTNDEGESILLRRMTPELSLSSSDTNNESLEDSDG CCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA