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The map label for this gene is yraM [C]

Identifier: 92114322

GI number: 92114322

Start: 2477110

End: 2478900

Strand: Direct

Name: yraM [C]

Synonym: Csal_2200

Alternate gene names: 92114322

Gene position: 2477110-2478900 (Clockwise)

Preceding gene: 92114305

Following gene: 92114323

Centisome position: 67.01

GC content: 66.22

Gene sequence:

>1791_bases
ATGCTCATATCATTGCGCAGCCTGTTGGGGCTCGCCCTGATCGCCTCAGTCCTTGCCGGCTGCGCCGGAGGACCGGGCAC
CAGCGAGACGCAACGCCCCTCGCAAGGGCCCGGTGCCAGTGAGCTGCTTCGCCAGGCGCAGCAACAGTCCGGCACGCAGG
CGGCCCAGAGCCGGCTGCAAGCGGCCGCCATCCTATCACGCCAGGGCAACGACGAGCAGGCGCTCGACGTGGCACGCGAC
ATCGACACCTCTCAGCTGAACCGTGGCGCCCTCATCGACTGGGCACTGCTGGTCTCGGAGCTCGCTCTGCGCAAGGAAGA
CGGTCGCGGCGCGCTGGCCGCCACGCGCATTCTCGACGACGTCGACGATATTCCCCGCGACGCGCAGCAGACCCTGCGCC
ACCGCAAGGGGCTGGCCCTGACACTCGTGGGCGATTCGCGCGCCGCCGCGGAAACACTGATCGCTCTCCAGCGCGATGAC
GCTCCCTTCGATCTCAACGACGACATCTGGAAGCCGCTGTCGCGCCTCAGCGAGCGCGTGCTGGATGACATGGACACGTC
TGCCGATCCGCTCACCGAAGGCTGGGTCGCCCTCGCGCGACTCTACCGTCAAAGCGGCGGCAACGTGTCCAGACTGAGCG
AGTCGCTGCAGGACTGGCGTGCCCGTTACGCCGACCATCCCGCCGCGCGCCGTCTGCCCAGCAACTTGTCGGCACTGCGT
GAACTGCGCGGCCGCGAAGTCAAGCGCATCGCGATATTCCTGCCCCAGTCAGGCCCATTGGCCAATGTCGCCAAGGCGCT
CAAGACCGGCATTCAGGCACGCCACATGGCGGCCCTGAACCAGGGCGAACAGACGCCACAACTGACCTATTACGACAGCA
GCGAGAACGACCTGGAGTCACTCTATGCCCAGGCGACCATGGACGGCGCACAGGTCGTGCTCGGACCACTCGACAAGGAC
CTGGTCTCGCAGCTCGAGCAGCGCGACGAGGTCGCCCTGCCGACGCTGGCGCTCAACTACGGGGAGCACCCGCGCAACCG
TGCCGACAAGCTGTTCCAGTACGGGCTCTCCGCCGAGGATGAAGCCCGTCAGATCGCCGAGCGCGCCTACATGGACGGAC
ATCGCGATGCCGCCGCGCTGGTGCCCGACAACGAATGGGGCGCCCGTGTCCTCAGAGCGTTCCGTGAGGACTGGGAAGCG
CAGCAAGGCGAGCTCGACGCCGTCGTGCACTACGCACCCAAGGGCTCCGTCAGCGACGCCACCAAGCGCTTGCTCGACTC
CGGGGGCGACGACATCGACATGCTGTTCCTGCTGGCACTCCCCAGCTATGCACGTCAGGTGCCCCCCATGCTGAAGTACT
ACTATGCAGGCGATCTCCCCGTCTATGCCACGTCCCAGGTCTACGGCGGCCGCCCGCAACCTCGTGCCGACCATGACCTC
AACGGCGTCATGTTCGTGGACATTCCCTGGCTGATTCCGGACGCCTCCGTGGGCGGCGAGGAAGCCTTGCCCTTCTATGC
CGCCTATCGCGAACTCGACGCCCGAGACGATCCCAGCCTGTTGAAACTCAACGCCATGGGTGTCGATGCCTATGAACTGG
CACGTCGACTGCCGCTGATGCAGGCATTGCATTCGCTGGAAGTGTTCGGCGCCACGGGGACCCTGCAGGCCCGAGACGAC
GGTCGCATCCAGCGCACCCTGCCGTGGGCGCAGTTCCAGTCGGGCATACCGGCCCCCCTGCTGAACACCGGCTCCGGTCT
CGAGATCGGCAATGTCCAACTCGAACAATGA

Upstream 100 bases:

>100_bases
GTCGTGTCATGTCGCGAGCGCCCGCCAGACGCCGCCTGCGTCAGACAACGTCCGGAAAAGGGAACCGTCCGAGCTGTACC
GCCAATAAAGGAATGACACC

Downstream 100 bases:

>100_bases
CTCACGCCGGCGCGGCCTCGAAATGGAGCGCCGTGCCGCGGACTGGCTGGCGTCACACGGGCTGCGCCTGGTGGACGCCA
ATCAGCATGCACGTCGCGGC

Product: LppC putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MLISLRSLLGLALIASVLAGCAGGPGTSETQRPSQGPGASELLRQAQQQSGTQAAQSRLQAAAILSRQGNDEQALDVARD
IDTSQLNRGALIDWALLVSELALRKEDGRGALAATRILDDVDDIPRDAQQTLRHRKGLALTLVGDSRAAAETLIALQRDD
APFDLNDDIWKPLSRLSERVLDDMDTSADPLTEGWVALARLYRQSGGNVSRLSESLQDWRARYADHPAARRLPSNLSALR
ELRGREVKRIAIFLPQSGPLANVAKALKTGIQARHMAALNQGEQTPQLTYYDSSENDLESLYAQATMDGAQVVLGPLDKD
LVSQLEQRDEVALPTLALNYGEHPRNRADKLFQYGLSAEDEARQIAERAYMDGHRDAAALVPDNEWGARVLRAFREDWEA
QQGELDAVVHYAPKGSVSDATKRLLDSGGDDIDMLFLLALPSYARQVPPMLKYYYAGDLPVYATSQVYGGRPQPRADHDL
NGVMFVDIPWLIPDASVGGEEALPFYAAYRELDARDDPSLLKLNAMGVDAYELARRLPLMQALHSLEVFGATGTLQARDD
GRIQRTLPWAQFQSGIPAPLLNTGSGLEIGNVQLEQ

Sequences:

>Translated_596_residues
MLISLRSLLGLALIASVLAGCAGGPGTSETQRPSQGPGASELLRQAQQQSGTQAAQSRLQAAAILSRQGNDEQALDVARD
IDTSQLNRGALIDWALLVSELALRKEDGRGALAATRILDDVDDIPRDAQQTLRHRKGLALTLVGDSRAAAETLIALQRDD
APFDLNDDIWKPLSRLSERVLDDMDTSADPLTEGWVALARLYRQSGGNVSRLSESLQDWRARYADHPAARRLPSNLSALR
ELRGREVKRIAIFLPQSGPLANVAKALKTGIQARHMAALNQGEQTPQLTYYDSSENDLESLYAQATMDGAQVVLGPLDKD
LVSQLEQRDEVALPTLALNYGEHPRNRADKLFQYGLSAEDEARQIAERAYMDGHRDAAALVPDNEWGARVLRAFREDWEA
QQGELDAVVHYAPKGSVSDATKRLLDSGGDDIDMLFLLALPSYARQVPPMLKYYYAGDLPVYATSQVYGGRPQPRADHDL
NGVMFVDIPWLIPDASVGGEEALPFYAAYRELDARDDPSLLKLNAMGVDAYELARRLPLMQALHSLEVFGATGTLQARDD
GRIQRTLPWAQFQSGIPAPLLNTGSGLEIGNVQLEQ
>Mature_596_residues
MLISLRSLLGLALIASVLAGCAGGPGTSETQRPSQGPGASELLRQAQQQSGTQAAQSRLQAAAILSRQGNDEQALDVARD
IDTSQLNRGALIDWALLVSELALRKEDGRGALAATRILDDVDDIPRDAQQTLRHRKGLALTLVGDSRAAAETLIALQRDD
APFDLNDDIWKPLSRLSERVLDDMDTSADPLTEGWVALARLYRQSGGNVSRLSESLQDWRARYADHPAARRLPSNLSALR
ELRGREVKRIAIFLPQSGPLANVAKALKTGIQARHMAALNQGEQTPQLTYYDSSENDLESLYAQATMDGAQVVLGPLDKD
LVSQLEQRDEVALPTLALNYGEHPRNRADKLFQYGLSAEDEARQIAERAYMDGHRDAAALVPDNEWGARVLRAFREDWEA
QQGELDAVVHYAPKGSVSDATKRLLDSGGDDIDMLFLLALPSYARQVPPMLKYYYAGDLPVYATSQVYGGRPQPRADHDL
NGVMFVDIPWLIPDASVGGEEALPFYAAYRELDARDDPSLLKLNAMGVDAYELARRLPLMQALHSLEVFGATGTLQARDD
GRIQRTLPWAQFQSGIPAPLLNTGSGLEIGNVQLEQ

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=332, Percent_Identity=29.5180722891566, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 65196; Mature: 65196

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLRSLLGLALIASVLAGCAGGPGTSETQRPSQGPGASELLRQAQQQSGTQAAQSRLQ
CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AAAILSRQGNDEQALDVARDIDTSQLNRGALIDWALLVSELALRKEDGRGALAATRILDD
HHHHHHCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VDDIPRDAQQTLRHRKGLALTLVGDSRAAAETLIALQRDDAPFDLNDDIWKPLSRLSERV
HHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDDMDTSADPLTEGWVALARLYRQSGGNVSRLSESLQDWRARYADHPAARRLPSNLSALR
HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH
ELRGREVKRIAIFLPQSGPLANVAKALKTGIQARHMAALNQGEQTPQLTYYDSSENDLES
HHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
LYAQATMDGAQVVLGPLDKDLVSQLEQRDEVALPTLALNYGEHPRNRADKLFQYGLSAED
HHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCHHEECCCCCCCHHHHHHHHHCCCCCH
EARQIAERAYMDGHRDAAALVPDNEWGARVLRAFREDWEAQQGELDAVVHYAPKGSVSDA
HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
TKRLLDSGGDDIDMLFLLALPSYARQVPPMLKYYYAGDLPVYATSQVYGGRPQPRADHDL
HHHHHHCCCCHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCEEECCHHCCCCCCCCCCCCC
NGVMFVDIPWLIPDASVGGEEALPFYAAYRELDARDDPSLLKLNAMGVDAYELARRLPLM
CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCHHH
QALHSLEVFGATGTLQARDDGRIQRTLPWAQFQSGIPAPLLNTGSGLEIGNVQLEQ
HHHHHHHHHCCCCEEEECCCCCEECCCCHHHHHCCCCCCCCCCCCCCEECCCEECC
>Mature Secondary Structure
MLISLRSLLGLALIASVLAGCAGGPGTSETQRPSQGPGASELLRQAQQQSGTQAAQSRLQ
CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AAAILSRQGNDEQALDVARDIDTSQLNRGALIDWALLVSELALRKEDGRGALAATRILDD
HHHHHHCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VDDIPRDAQQTLRHRKGLALTLVGDSRAAAETLIALQRDDAPFDLNDDIWKPLSRLSERV
HHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDDMDTSADPLTEGWVALARLYRQSGGNVSRLSESLQDWRARYADHPAARRLPSNLSALR
HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH
ELRGREVKRIAIFLPQSGPLANVAKALKTGIQARHMAALNQGEQTPQLTYYDSSENDLES
HHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
LYAQATMDGAQVVLGPLDKDLVSQLEQRDEVALPTLALNYGEHPRNRADKLFQYGLSAED
HHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCHHEECCCCCCCHHHHHHHHHCCCCCH
EARQIAERAYMDGHRDAAALVPDNEWGARVLRAFREDWEAQQGELDAVVHYAPKGSVSDA
HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
TKRLLDSGGDDIDMLFLLALPSYARQVPPMLKYYYAGDLPVYATSQVYGGRPQPRADHDL
HHHHHHCCCCHHHHHHHHHCCHHHHHCCHHHHHHHCCCCCEEECCHHCCCCCCCCCCCCC
NGVMFVDIPWLIPDASVGGEEALPFYAAYRELDARDDPSLLKLNAMGVDAYELARRLPLM
CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCHHH
QALHSLEVFGATGTLQARDDGRIQRTLPWAQFQSGIPAPLLNTGSGLEIGNVQLEQ
HHHHHHHHHCCCCEEEECCCCCEECCCCHHHHHCCCCCCCCCCCCCCEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]