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The map label for this gene is rdgC [H]

Identifier: 92114291

GI number: 92114291

Start: 2442000

End: 2442926

Strand: Direct

Name: rdgC [H]

Synonym: Csal_2169

Alternate gene names: 92114291

Gene position: 2442000-2442926 (Clockwise)

Preceding gene: 92114283

Following gene: 92114292

Centisome position: 66.06

GC content: 66.34

Gene sequence:

>927_bases
ATGTGGTTCAAGCACTTGCATCTCTATCGTCTGCACGACACGACGCCGGTCGCGCTCGATGCACTCGAAACGGCACTGGA
GGCATTCGCCTTTCGCCCGGTGTCGCCCAGCGAGGGCAAACGCCTCGGCTGGCAGTGCCCTGCGGGACGTCACGGGCAGC
AACGCGTGCATGAGATCCAAGGCCATCGCCTCCTCTCCGCCCTGCGTCAGGAGCGCCTGCTGCCCGCATCGGTGATTCGC
GAGGAAGTCGAGGAGCGTGCCGCCGAGCGCGAGGCTGCCGAAGGCCGCCCCTTGCCGCGTCGCGACCGCCAGGCGATCAA
GGAGCAGGTCGTCGAGGAGCTCCTGCCCCGCGCCTTCACCCGCAGTCAGCGCATCGACCTGTGGTGGGACACCGCCCGCG
GGCTCATCGCCATCAACTGCGCCAGCCGCACGCGTGCCGAGGAGGCCCTCGACCTGCTGCGGCAGTCGCTGGGGTCGCTC
CAGGTGACGCCGCTCACGGTGCGCCAGTTGCCATCGCGCACCATGACCACCTGGCTGGAAGACATGACGTCACGCCCCGA
AGGACTGCGCCTGGGCGATCAGGTCGAACTCAAGGATGCCGGTGACGACGGTGTCTGGCGTGCACGTGGCATCGACCTCG
ACGGCGACGAAGTGCAAAGCGTGCTGGCCGGCGGCCGCCAGGCCAGCCGTCTGGCGCTGGACATCGAAGACCAGCTGTCG
CTGGTCTTGCATGATGATCTGACGCTCAAGTCGTTACGCTTCGCCGACGCCGTGCTCGACGAAGCGTCGCAAAACGAGGA
CGATGACGACCCCATACTGCGCCTGGAAACGGACTTCGCCCTCATGGCCCACGTACTTTCTGGATTCATCGAACAACTCA
TCGACTGGCTGGGCGGTGAAGCCGACCCGGCAGCGCCGACATCATGA

Upstream 100 bases:

>100_bases
TCGACGCTCGACGCCTGATCGGCGAACGCATCCCGCCCGGGGAGGTGGCACGGGCCGCGGCGTTTCGCCATAATGAGCCC
CTTTGTGATGGAACAGGCCC

Downstream 100 bases:

>100_bases
CGCACGCATCGACTCCGCATTCCGCCCCGCACGACTTCGACGCCATCCGTCCCTATCACGACGACGAGGTCGCCAGCGTT
CTCGATCGCCTCGCCCATTG

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MWFKHLHLYRLHDTTPVALDALETALEAFAFRPVSPSEGKRLGWQCPAGRHGQQRVHEIQGHRLLSALRQERLLPASVIR
EEVEERAAEREAAEGRPLPRRDRQAIKEQVVEELLPRAFTRSQRIDLWWDTARGLIAINCASRTRAEEALDLLRQSLGSL
QVTPLTVRQLPSRTMTTWLEDMTSRPEGLRLGDQVELKDAGDDGVWRARGIDLDGDEVQSVLAGGRQASRLALDIEDQLS
LVLHDDLTLKSLRFADAVLDEASQNEDDDDPILRLETDFALMAHVLSGFIEQLIDWLGGEADPAAPTS

Sequences:

>Translated_308_residues
MWFKHLHLYRLHDTTPVALDALETALEAFAFRPVSPSEGKRLGWQCPAGRHGQQRVHEIQGHRLLSALRQERLLPASVIR
EEVEERAAEREAAEGRPLPRRDRQAIKEQVVEELLPRAFTRSQRIDLWWDTARGLIAINCASRTRAEEALDLLRQSLGSL
QVTPLTVRQLPSRTMTTWLEDMTSRPEGLRLGDQVELKDAGDDGVWRARGIDLDGDEVQSVLAGGRQASRLALDIEDQLS
LVLHDDLTLKSLRFADAVLDEASQNEDDDDPILRLETDFALMAHVLSGFIEQLIDWLGGEADPAAPTS
>Mature_308_residues
MWFKHLHLYRLHDTTPVALDALETALEAFAFRPVSPSEGKRLGWQCPAGRHGQQRVHEIQGHRLLSALRQERLLPASVIR
EEVEERAAEREAAEGRPLPRRDRQAIKEQVVEELLPRAFTRSQRIDLWWDTARGLIAINCASRTRAEEALDLLRQSLGSL
QVTPLTVRQLPSRTMTTWLEDMTSRPEGLRLGDQVELKDAGDDGVWRARGIDLDGDEVQSVLAGGRQASRLALDIEDQLS
LVLHDDLTLKSLRFADAVLDEASQNEDDDDPILRLETDFALMAHVLSGFIEQLIDWLGGEADPAAPTS

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=304, Percent_Identity=37.828947368421, Blast_Score=209, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34620; Mature: 34620

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKHLHLYRLHDTTPVALDALETALEAFAFRPVSPSEGKRLGWQCPAGRHGQQRVHEIQ
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
GHRLLSALRQERLLPASVIREEVEERAAEREAAEGRPLPRRDRQAIKEQVVEELLPRAFT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSQRIDLWWDTARGLIAINCASRTRAEEALDLLRQSLGSLQVTPLTVRQLPSRTMTTWLE
CCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCEECCCHHHHHCCCHHHHHHHH
DMTSRPEGLRLGDQVELKDAGDDGVWRARGIDLDGDEVQSVLAGGRQASRLALDIEDQLS
HHHCCCCCCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHEEEEHHHHHH
LVLHDDLTLKSLRFADAVLDEASQNEDDDDPILRLETDFALMAHVLSGFIEQLIDWLGGE
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
ADPAAPTS
CCCCCCCC
>Mature Secondary Structure
MWFKHLHLYRLHDTTPVALDALETALEAFAFRPVSPSEGKRLGWQCPAGRHGQQRVHEIQ
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
GHRLLSALRQERLLPASVIREEVEERAAEREAAEGRPLPRRDRQAIKEQVVEELLPRAFT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSQRIDLWWDTARGLIAINCASRTRAEEALDLLRQSLGSLQVTPLTVRQLPSRTMTTWLE
CCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCEECCCHHHHHCCCHHHHHHHH
DMTSRPEGLRLGDQVELKDAGDDGVWRARGIDLDGDEVQSVLAGGRQASRLALDIEDQLS
HHHCCCCCCCCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHEEEEHHHHHH
LVLHDDLTLKSLRFADAVLDEASQNEDDDDPILRLETDFALMAHVLSGFIEQLIDWLGGE
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
ADPAAPTS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA