| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is metI [H]
Identifier: 92114223
GI number: 92114223
Start: 2369732
End: 2370373
Strand: Direct
Name: metI [H]
Synonym: Csal_2101
Alternate gene names: 92114223
Gene position: 2369732-2370373 (Clockwise)
Preceding gene: 92114222
Following gene: 92114224
Centisome position: 64.1
GC content: 64.02
Gene sequence:
>642_bases ATGCTTGAACTGATCCTCGAGGCAACGCTCGATACGCTTTATATGGTCGCGCTGTCGGGGGCGGTGTCGGCATTGATCGG CATCCCGCTGGGGGTGCTGCTGTACGTCACTCGCCCCGGCCAGATCCTGGCGCAGCCATTCGCCCAGCGCGTGCTCGCCA TCGTGACCAACATCGGCCGCTCGATTCCCTTCATCATTCTGATGGTGGCGATCATTCCCTTCACGCGCCTGATCGTGGGC AGCTCCATCGGCACCAATGCCGCCGTGGTCCCGCTCATCATCGCCGCCATTCCCTTCGTGGCGCGCCTGGTGGAAGGCGC ATTGAACGAGATTCCTCCCGGGCTGATCGAGGCCGCGCAGGCGATGGGGGCGACGCCCTACCAGATCATCACCAAGGTCC TGCTGCCGGAAGCCAAGGGCGGCATTCTCAACGGCCTGACGATCACCGTCGTCACACTGGTCAGCTACTCGGCCATGGCC GGCGCCGTCGGCGGCGGCGGGCTGGGCGACCTGGGCATACGCTACGGCTACAACCGCTTCGATCCCCTGATCATGCTCAT CACCGTGGCGATCCTGGTGATCATGGTGCAAGGCTTCCAGAGCCTCGGCGACCACCTGGTACGCAAGGCCGACCACAAAT GA
Upstream 100 bases:
>100_bases ATCGCCGAGCTCATCGGCTCGCCCGACACGACGTCGCGGGCACTCACGCAACTCGAAGCACACGATATCAACGTGGAGGT ACTCGGCCATGTCCAGCGCG
Downstream 100 bases:
>100_bases ACACGTGGTCAGTCAGAAAACGCAAAGCTATAATAGGCGCGTCTTTTATACTCAAAAAAGCATAAATGCTTTCGGGAGCC GGCCCTCCCCGCCGGCGAGA
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MLELILEATLDTLYMVALSGAVSALIGIPLGVLLYVTRPGQILAQPFAQRVLAIVTNIGRSIPFIILMVAIIPFTRLIVG SSIGTNAAVVPLIIAAIPFVARLVEGALNEIPPGLIEAAQAMGATPYQIITKVLLPEAKGGILNGLTITVVTLVSYSAMA GAVGGGGLGDLGIRYGYNRFDPLIMLITVAILVIMVQGFQSLGDHLVRKADHK
Sequences:
>Translated_213_residues MLELILEATLDTLYMVALSGAVSALIGIPLGVLLYVTRPGQILAQPFAQRVLAIVTNIGRSIPFIILMVAIIPFTRLIVG SSIGTNAAVVPLIIAAIPFVARLVEGALNEIPPGLIEAAQAMGATPYQIITKVLLPEAKGGILNGLTITVVTLVSYSAMA GAVGGGGLGDLGIRYGYNRFDPLIMLITVAILVIMVQGFQSLGDHLVRKADHK >Mature_213_residues MLELILEATLDTLYMVALSGAVSALIGIPLGVLLYVTRPGQILAQPFAQRVLAIVTNIGRSIPFIILMVAIIPFTRLIVG SSIGTNAAVVPLIIAAIPFVARLVEGALNEIPPGLIEAAQAMGATPYQIITKVLLPEAKGGILNGLTITVVTLVSYSAMA GAVGGGGLGDLGIRYGYNRFDPLIMLITVAILVIMVQGFQSLGDHLVRKADHK
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=213, Percent_Identity=55.3990610328638, Blast_Score=191, Evalue=4e-50, Organism=Escherichia coli, GI1789033, Length=157, Percent_Identity=31.8471337579618, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 22278; Mature: 22278
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELILEATLDTLYMVALSGAVSALIGIPLGVLLYVTRPGQILAQPFAQRVLAIVTNIGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC SIPFIILMVAIIPFTRLIVGSSIGTNAAVVPLIIAAIPFVARLVEGALNEIPPGLIEAAQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AMGATPYQIITKVLLPEAKGGILNGLTITVVTLVSYSAMAGAVGGGGLGDLGIRYGYNRF HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHH DPLIMLITVAILVIMVQGFQSLGDHLVRKADHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLELILEATLDTLYMVALSGAVSALIGIPLGVLLYVTRPGQILAQPFAQRVLAIVTNIGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC SIPFIILMVAIIPFTRLIVGSSIGTNAAVVPLIIAAIPFVARLVEGALNEIPPGLIEAAQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AMGATPYQIITKVLLPEAKGGILNGLTITVVTLVSYSAMAGAVGGGGLGDLGIRYGYNRF HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHH DPLIMLITVAILVIMVQGFQSLGDHLVRKADHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]