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The map label for this gene is fliP [H]

Identifier: 92114088

GI number: 92114088

Start: 2221136

End: 2221885

Strand: Direct

Name: fliP [H]

Synonym: Csal_1965

Alternate gene names: 92114088

Gene position: 2221136-2221885 (Clockwise)

Preceding gene: 92114087

Following gene: 92114089

Centisome position: 60.09

GC content: 61.87

Gene sequence:

>750_bases
ATGAACGTCGCTGTCATGCTGCGTTGCGGACTCGCCGTATTGCTGCTGGCCTGGCCGGCCTTCGGTTGGGGGCAGGAAAT
TTCCGGCATCGTCAGCGAGCCCACCGGCGATGGCGGCCAGCAATGGTCGCTGAGCCTGCAGACGCTGCTGTTTCTCAGCT
CGCTGGCCTTCCTGCCGGCGCTGCTGCTGGGCATGACCTGCTTTACGCGCATCATCATCGTGCTCAGCCTGTTGCGCACC
GCGATCGGTACCCAATCGACGCCGCCCAATCAGGTGCTCCTCGGCCTGGCGCTCTTCATGACCTTCTTCATCATGTCGCC
GGTGCTGGATCGCGTGCACGAGCAGGCCTGGGTGCCCTTCTCCGAGGAGCGGATCAGCCTCGAGCAAGCCCTGGAACAGG
GCAGTCAGCCGTTCCGGGAGTTCATGTTCGGCCAGACCCGTGAAACCGATCTGGCGCTCTTCGCGCGCATGGCCGACGCC
GATGAAATGCAGGGCCCCGAAGACGTCCCGATGCGTCTGCTGATACCGGCCTTTTTGACCAGCGAGCTGAAGACGGCATT
CCAGATCGGGTTCAGCATCTTCATCCCCTTCTTGATCATCGATCTCGTGGTGGCCAGTGTCCTGATGGCACTGGGGATGA
TGATGGTGCCGCCCGCGACCATCTCGCTGCCCTTCAAGCTGATGCTGTTCGTGCTCGTCGACGGCTGGCAGTTATTGATC
GGCTCCCTGGCCGAAAGCTTCTACATGTAA

Upstream 100 bases:

>100_bases
TGGCCCAGAATATCGGAGGCCGGCCATCCGCCACCGAGGATGCCGCGTCAAGCAGCCAGCGCTCCCGGGACGAAAACGCA
CCGGACAAGGAAGCCGACCG

Downstream 100 bases:

>100_bases
ACGGCGGGCGGCCGTGTGCCGGCCACCTGCACGAGAACGACGCGAGGAGATTCCGCCATGACACCCGAGATGGTCATGGG
GTTGGCGTACCAGGGCATGA

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNVAVMLRCGLAVLLLAWPAFGWGQEISGIVSEPTGDGGQQWSLSLQTLLFLSSLAFLPALLLGMTCFTRIIIVLSLLRT
AIGTQSTPPNQVLLGLALFMTFFIMSPVLDRVHEQAWVPFSEERISLEQALEQGSQPFREFMFGQTRETDLALFARMADA
DEMQGPEDVPMRLLIPAFLTSELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI
GSLAESFYM

Sequences:

>Translated_249_residues
MNVAVMLRCGLAVLLLAWPAFGWGQEISGIVSEPTGDGGQQWSLSLQTLLFLSSLAFLPALLLGMTCFTRIIIVLSLLRT
AIGTQSTPPNQVLLGLALFMTFFIMSPVLDRVHEQAWVPFSEERISLEQALEQGSQPFREFMFGQTRETDLALFARMADA
DEMQGPEDVPMRLLIPAFLTSELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI
GSLAESFYM
>Mature_249_residues
MNVAVMLRCGLAVLLLAWPAFGWGQEISGIVSEPTGDGGQQWSLSLQTLLFLSSLAFLPALLLGMTCFTRIIIVLSLLRT
AIGTQSTPPNQVLLGLALFMTFFIMSPVLDRVHEQAWVPFSEERISLEQALEQGSQPFREFMFGQTRETDLALFARMADA
DEMQGPEDVPMRLLIPAFLTSELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI
GSLAESFYM

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=223, Percent_Identity=72.6457399103139, Blast_Score=335, Evalue=1e-93,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27530; Mature: 27530

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVAVMLRCGLAVLLLAWPAFGWGQEISGIVSEPTGDGGQQWSLSLQTLLFLSSLAFLPA
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLLGMTCFTRIIIVLSLLRTAIGTQSTPPNQVLLGLALFMTFFIMSPVLDRVHEQAWVPF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SEERISLEQALEQGSQPFREFMFGQTRETDLALFARMADADEMQGPEDVPMRLLIPAFLT
HHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHH
SELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GSLAESFYM
HHHHHHHCC
>Mature Secondary Structure
MNVAVMLRCGLAVLLLAWPAFGWGQEISGIVSEPTGDGGQQWSLSLQTLLFLSSLAFLPA
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLLGMTCFTRIIIVLSLLRTAIGTQSTPPNQVLLGLALFMTFFIMSPVLDRVHEQAWVPF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SEERISLEQALEQGSQPFREFMFGQTRETDLALFARMADADEMQGPEDVPMRLLIPAFLT
HHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHH
SELKTAFQIGFSIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GSLAESFYM
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]