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The map label for this gene is fliM [H]

Identifier: 92114085

GI number: 92114085

Start: 2219115

End: 2220131

Strand: Direct

Name: fliM [H]

Synonym: Csal_1962

Alternate gene names: 92114085

Gene position: 2219115-2220131 (Clockwise)

Preceding gene: 92114084

Following gene: 92114086

Centisome position: 60.03

GC content: 60.08

Gene sequence:

>1017_bases
ATGTCCCAAGACGATCTGCTCTCGCAGGAAGAGATCGACGCCCTTCTCAAGGGCGTCAGCGGTGACGAGGATAACGCGCA
GGACGAACGGGCCTCGCGCGAGGGGAAAGTGCGTCCGTTCGACCCCGCCAAGCAGCATCGCATCATTCGCGAGCGGCTTC
ATGCGCTGGACATCATCAACGAACGTTTCGCGCGCCAGTTCCGGGTCGCGCTTTTCAACCTGATGCGGCGCAGTGCCGAC
ATCACGGTGGAAAGCGTCCGTTATCAGAGCTATAGCGAATTTTCGCGGAACCTGCCGGTCCCCACCAATCTCAACTTGAT
CACCATGAAGCCCCTGCGCGGCTCGGCGCTGGTGGTCTTTCCGCCGAGCCTGGTGTTCATGGTGGTCGACAACCTGTTCG
GCGGTGACGGCCGCTTCCTGACCAAGTCCGAGGGACGCGAGTTCACGCGAACCGAACAGCGCATCATCCATCGCATGCTC
AAGATGGCGCTGGAAGGCTACAGCGAATCGTGGAAATCGGTCTATCCACTGGACATCGAGTACACGCGTTCGGAACTGCA
GGTGAAGTTCGCCAACATCACCAACTCGCCGAACGAGATCGTCGTCAACAGCACCTTCCACGTGGAGGTCGGCAATCTCT
CGAGCGAGTTCAACATCTGCATTCCCTACTCGATGATCGAGCCGATTCGCGACATTCTCGCCAGCCCGCTGCACGACACG
CATCCCGACGAGGAGCAGCAGTGGGAAGCGCGCATGGCGCATGAAATCCGCCACTCGTCCGTGGAGTTGACCGCCGACTT
CGTCGATATCCCGCTGCGCCTGCGGGATGTGACCCAACTGTCGGTGGGCGACATCATTCCCATCGAGCTACCCGAGGCAG
TGAATGTCAGTGTCGACGGCATACCCGTGATGACGTGCGACTACGGCAGCCAGAAATCCCAGCGCGCCTTGCGCGTCAGG
CACCTCATCGAACACGGCTCGAGCCAAGTTGCAGCGAAGGATCCGAAAGATGACTGA

Upstream 100 bases:

>100_bases
CCAGATACTGGCGATGTTCGATGAACCGCTGACCGAGCCGCAGCCGTCTCTGGACGTCACCGGCGTGCTATTCTCCGAAT
TCATTGTGCAATAAGACGAT

Downstream 100 bases:

>100_bases
CCCCCAAAACCCAGACAAGAAAGGCACCGAGGACGAGTGGGCCGAGGCCATGGCGCAGCAGCAGGCCGAGGAAGGCAACG
ATGAGACCTCCGACGACGCG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSQDDLLSQEEIDALLKGVSGDEDNAQDERASREGKVRPFDPAKQHRIIRERLHALDIINERFARQFRVALFNLMRRSAD
ITVESVRYQSYSEFSRNLPVPTNLNLITMKPLRGSALVVFPPSLVFMVVDNLFGGDGRFLTKSEGREFTRTEQRIIHRML
KMALEGYSESWKSVYPLDIEYTRSELQVKFANITNSPNEIVVNSTFHVEVGNLSSEFNICIPYSMIEPIRDILASPLHDT
HPDEEQQWEARMAHEIRHSSVELTADFVDIPLRLRDVTQLSVGDIIPIELPEAVNVSVDGIPVMTCDYGSQKSQRALRVR
HLIEHGSSQVAAKDPKDD

Sequences:

>Translated_338_residues
MSQDDLLSQEEIDALLKGVSGDEDNAQDERASREGKVRPFDPAKQHRIIRERLHALDIINERFARQFRVALFNLMRRSAD
ITVESVRYQSYSEFSRNLPVPTNLNLITMKPLRGSALVVFPPSLVFMVVDNLFGGDGRFLTKSEGREFTRTEQRIIHRML
KMALEGYSESWKSVYPLDIEYTRSELQVKFANITNSPNEIVVNSTFHVEVGNLSSEFNICIPYSMIEPIRDILASPLHDT
HPDEEQQWEARMAHEIRHSSVELTADFVDIPLRLRDVTQLSVGDIIPIELPEAVNVSVDGIPVMTCDYGSQKSQRALRVR
HLIEHGSSQVAAKDPKDD
>Mature_337_residues
SQDDLLSQEEIDALLKGVSGDEDNAQDERASREGKVRPFDPAKQHRIIRERLHALDIINERFARQFRVALFNLMRRSADI
TVESVRYQSYSEFSRNLPVPTNLNLITMKPLRGSALVVFPPSLVFMVVDNLFGGDGRFLTKSEGREFTRTEQRIIHRMLK
MALEGYSESWKSVYPLDIEYTRSELQVKFANITNSPNEIVVNSTFHVEVGNLSSEFNICIPYSMIEPIRDILASPLHDTH
PDEEQQWEARMAHEIRHSSVELTADFVDIPLRLRDVTQLSVGDIIPIELPEAVNVSVDGIPVMTCDYGSQKSQRALRVRH
LIEHGSSQVAAKDPKDD

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=335, Percent_Identity=58.8059701492537, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 38515; Mature: 38384

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDDLLSQEEIDALLKGVSGDEDNAQDERASREGKVRPFDPAKQHRIIRERLHALDIIN
CCCHHCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ERFARQFRVALFNLMRRSADITVESVRYQSYSEFSRNLPVPTNLNLITMKPLRGSALVVF
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEE
PPSLVFMVVDNLFGGDGRFLTKSEGREFTRTEQRIIHRMLKMALEGYSESWKSVYPLDIE
CHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCE
YTRSELQVKFANITNSPNEIVVNSTFHVEVGNLSSEFNICIPYSMIEPIRDILASPLHDT
ECCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECHHHHHHHHHHHHCCCCCC
HPDEEQQWEARMAHEIRHSSVELTADFVDIPLRLRDVTQLSVGDIIPIELPEAVNVSVDG
CCCHHHHHHHHHHHHHHHCCCEEEEHHHHCCCEEHHHHEECCCCEEEEECCCCCEEEECC
IPVMTCDYGSQKSQRALRVRHLIEHGSSQVAAKDPKDD
EEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure 
SQDDLLSQEEIDALLKGVSGDEDNAQDERASREGKVRPFDPAKQHRIIRERLHALDIIN
CCHHCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ERFARQFRVALFNLMRRSADITVESVRYQSYSEFSRNLPVPTNLNLITMKPLRGSALVVF
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEE
PPSLVFMVVDNLFGGDGRFLTKSEGREFTRTEQRIIHRMLKMALEGYSESWKSVYPLDIE
CHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCE
YTRSELQVKFANITNSPNEIVVNSTFHVEVGNLSSEFNICIPYSMIEPIRDILASPLHDT
ECCCEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECHHHHHHHHHHHHCCCCCC
HPDEEQQWEARMAHEIRHSSVELTADFVDIPLRLRDVTQLSVGDIIPIELPEAVNVSVDG
CCCHHHHHHHHHHHHHHHCCCEEEEHHHHCCCEEHHHHEECCCCEEEEECCCCCEEEECC
IPVMTCDYGSQKSQRALRVRHLIEHGSSQVAAKDPKDD
EEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3519573; 9097040; 9278503; 2651416 [H]