Click here to switch to the map view.

The map label for this gene is fliH [H]

Identifier: 92114080

GI number: 92114080

Start: 2214392

End: 2215150

Strand: Direct

Name: fliH [H]

Synonym: Csal_1957

Alternate gene names: 92114080

Gene position: 2214392-2215150 (Clockwise)

Preceding gene: 92114079

Following gene: 92114081

Centisome position: 59.9

GC content: 67.59

Gene sequence:

>759_bases
ATGTCTGACAAGCCGCTATCCGATGCCGTCATCCATACGCCCGACGAACAGCGCTGGCGCCCCTGGCGCATGGACGAACT
GCCGCGCGAAGACGCCGGGGCCGGCGGCAAGATCGACAGCGCGCGACTCTTCGAGCAGCGCCGTCGTCAGCAGCGTCAGC
GTCTCGCCGAGGAACGCGAAGCATTGCGTCGCAAGACGCGGGAAAGCGCGCATCAGGAAGGCTACGCAGCCGGCTACGAG
GAAGGACGTCAAGCCGGCTACGAACAAGGGTTGCAGGAAGGACGCGAGGCCGGCGAGCAAGAAGCACGCCGACAGCTCGA
CGCGGCCCTGGCGCCACTGGGACGACTGGCCGAGGACTTCCGCACATCGCTGGACGCCCTGGACACCATGCTCGCCGATC
AGCTCGTCGAGCTGGCCATGCTCACCGGCCGGCATCTCGCCGGCGAGGCACTGACCGCAACGCCTGAGCAGGTCGTTACC
CTCGTGCGCCAATTGCTCCACGAAGAGCCGGTGCTGAATGGTCCCACCCAGCTGTGGATGCATCCCGAGGACCTGGTCCT
GGTGACCGAGCATGTGGGCAACGAGCTCGAAGCCGCCGGCTGGACCCTGCACGAAGACGCCGACCTTCAGCGCGGCGGCT
GCCGGGCGGAAAGCGCCACCGGCGGTCTCGATGCCACGCTCGAAACGCGCTGGCAGGCGGCCCTCGATCAGCGCCGCAAG
CGCCATGTCAGCCAACCCCAGGAGACGTCGGATGACTGA

Upstream 100 bases:

>100_bases
CGCGTGTCGCAGGTGGAGGCCGAGCAGAAAGCGGTTCTCCAGATCGTTCGCCGCCTTGCCGACAACGGCGAGATCGTGCT
GAGCGGAGGCGACGACAGTT

Downstream 100 bases:

>100_bases
GACGCCGCTTGCCGACATGCCCGACGAGACCTCTCACACTGCTCAATGGCAGCGCGCCCTGGGCAAGGTCTCGGAGCGCA
TCGAGGGGCTCGAATCGCGA

Product: flagellar assembly protein FliH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSDKPLSDAVIHTPDEQRWRPWRMDELPREDAGAGGKIDSARLFEQRRRQQRQRLAEEREALRRKTRESAHQEGYAAGYE
EGRQAGYEQGLQEGREAGEQEARRQLDAALAPLGRLAEDFRTSLDALDTMLADQLVELAMLTGRHLAGEALTATPEQVVT
LVRQLLHEEPVLNGPTQLWMHPEDLVLVTEHVGNELEAAGWTLHEDADLQRGGCRAESATGGLDATLETRWQAALDQRRK
RHVSQPQETSDD

Sequences:

>Translated_252_residues
MSDKPLSDAVIHTPDEQRWRPWRMDELPREDAGAGGKIDSARLFEQRRRQQRQRLAEEREALRRKTRESAHQEGYAAGYE
EGRQAGYEQGLQEGREAGEQEARRQLDAALAPLGRLAEDFRTSLDALDTMLADQLVELAMLTGRHLAGEALTATPEQVVT
LVRQLLHEEPVLNGPTQLWMHPEDLVLVTEHVGNELEAAGWTLHEDADLQRGGCRAESATGGLDATLETRWQAALDQRRK
RHVSQPQETSDD
>Mature_251_residues
SDKPLSDAVIHTPDEQRWRPWRMDELPREDAGAGGKIDSARLFEQRRRQQRQRLAEEREALRRKTRESAHQEGYAAGYEE
GRQAGYEQGLQEGREAGEQEARRQLDAALAPLGRLAEDFRTSLDALDTMLADQLVELAMLTGRHLAGEALTATPEQVVTL
VRQLLHEEPVLNGPTQLWMHPEDLVLVTEHVGNELEAAGWTLHEDADLQRGGCRAESATGGLDATLETRWQAALDQRRKR
HVSQPQETSDD

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=166, Percent_Identity=39.7590361445783, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 28395; Mature: 28264

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKPLSDAVIHTPDEQRWRPWRMDELPREDAGAGGKIDSARLFEQRRRQQRQRLAEERE
CCCCCCCCCEEECCCHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALRRKTRESAHQEGYAAGYEEGRQAGYEQGLQEGREAGEQEARRQLDAALAPLGRLAEDF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTSLDALDTMLADQLVELAMLTGRHLAGEALTATPEQVVTLVRQLLHEEPVLNGPTQLWM
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHHEEE
HPEDLVLVTEHVGNELEAAGWTLHEDADLQRGGCRAESATGGLDATLETRWQAALDQRRK
CCCHHEEEHHHHCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RHVSQPQETSDD
HHCCCCCCCCCC
>Mature Secondary Structure 
SDKPLSDAVIHTPDEQRWRPWRMDELPREDAGAGGKIDSARLFEQRRRQQRQRLAEERE
CCCCCCCCEEECCCHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALRRKTRESAHQEGYAAGYEEGRQAGYEQGLQEGREAGEQEARRQLDAALAPLGRLAEDF
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTSLDALDTMLADQLVELAMLTGRHLAGEALTATPEQVVTLVRQLLHEEPVLNGPTQLWM
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHHEEE
HPEDLVLVTEHVGNELEAAGWTLHEDADLQRGGCRAESATGGLDATLETRWQAALDQRRK
CCCHHEEEHHHHCCHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RHVSQPQETSDD
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]