| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yflP [H]
Identifier: 92113577
GI number: 92113577
Start: 1645200
End: 1646189
Strand: Direct
Name: yflP [H]
Synonym: Csal_1453
Alternate gene names: 92113577
Gene position: 1645200-1646189 (Clockwise)
Preceding gene: 92113571
Following gene: 92113578
Centisome position: 44.51
GC content: 63.13
Gene sequence:
>990_bases ATGGCTTTCAAGACGCCGCTCAAACTGGTCATGGCCGCTGCGCTGACATTGGGTGCCAGCAGCGCCATGGCATTCGAACC GTCCGGCAAGGTCGAGTGCATCGCGCCCTCCGATCCGGGCGGCGGCTGGGATTTCACCTGCCGCAGCGTGGGTAACGTGA TGGAAGAGCTCGACATGGTGCCGGGCAGCGTGCAGACCCTCAACATGGCGGGGGCAGGCGGCGGTGTCGCTTACGCGCAC ACCGTCAGCAAGCGTGCCGGCGACGACCATCTGCTGGTGGCGGCCTCCACGGCGACCACCACGCGCCTGGCGCAAGGTCA GTTCCAGGGGCTGGACGCCGACATGGTCAACTGGATCGGTGCTCTCGGCGCCGACTACGGTGTGATAGCCGTCTCCAAGG ACTCGCCGTACCAGAACCTCAACGAGCTGATGGAAGCCCTGAAAGAAGACCCGCGCTCGGTGAAGTTCGCCGGTGGCAGC GCCAAGGGCGGCTGGGACCATCTCAAGGTGCTGATCGCGGCGCAGGCGGCGGATGTCGATAACCTGCCCCGGATTCCGTA TCTGTCCTACAACAACGGTGGCGAGGCCATGACTCAAGTGGTCGGCGGTCATGTCGATGCCTTCACGGGCGACATCACCG AGGCTCAGGGCTTCATGGAATCCGGCGACCTGCGTGTGCTGGCCGTGCTGGCCGATGAGCGCCTGCCCGGCGAGTTCAGC GACATCCCCACCGCCAAGGAACAGGGCATCGATGCCGTAGGCCCGAACTGGCGCGGTTTCTACATGCCGGCGGACATCTC CGACGAGGCCAAGCAGTACTGGGTCGATGCCGTCGATGAGCTCTACGCCAGCGACGAATGGAAGAAGGTCATGAAGAACA ATGGCCTGATGCCGTTCCATGTCAGCGGTGCCGAGTTCGAAGAATTCGTCCATCAGCAGATCCAGGACATTCAGTCGCTC TCCAAGGAAATCGGGCTGATCAAGCAATGA
Upstream 100 bases:
>100_bases TTTTCCGCTCAAGGGAACGATGTTCTGCCTTACAGAACTGTAAGGTAAATGTCAGGTTGCCCGCAACCCATTTCAATCTC GTGCAAGGGAGATAACAACA
Downstream 100 bases:
>100_bases CCCAACGCAACGACCGTATCTGCGGTGTGCTGCTGCTCGTCCTGGCCGTCGCGTACGGCTGGGGCGCCACACAGTTCCCG GAACCGTTCGGTGGGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAFKTPLKLVMAAALTLGASSAMAFEPSGKVECIAPSDPGGGWDFTCRSVGNVMEELDMVPGSVQTLNMAGAGGGVAYAH TVSKRAGDDHLLVAASTATTTRLAQGQFQGLDADMVNWIGALGADYGVIAVSKDSPYQNLNELMEALKEDPRSVKFAGGS AKGGWDHLKVLIAAQAADVDNLPRIPYLSYNNGGEAMTQVVGGHVDAFTGDITEAQGFMESGDLRVLAVLADERLPGEFS DIPTAKEQGIDAVGPNWRGFYMPADISDEAKQYWVDAVDELYASDEWKKVMKNNGLMPFHVSGAEFEEFVHQQIQDIQSL SKEIGLIKQ
Sequences:
>Translated_329_residues MAFKTPLKLVMAAALTLGASSAMAFEPSGKVECIAPSDPGGGWDFTCRSVGNVMEELDMVPGSVQTLNMAGAGGGVAYAH TVSKRAGDDHLLVAASTATTTRLAQGQFQGLDADMVNWIGALGADYGVIAVSKDSPYQNLNELMEALKEDPRSVKFAGGS AKGGWDHLKVLIAAQAADVDNLPRIPYLSYNNGGEAMTQVVGGHVDAFTGDITEAQGFMESGDLRVLAVLADERLPGEFS DIPTAKEQGIDAVGPNWRGFYMPADISDEAKQYWVDAVDELYASDEWKKVMKNNGLMPFHVSGAEFEEFVHQQIQDIQSL SKEIGLIKQ >Mature_328_residues AFKTPLKLVMAAALTLGASSAMAFEPSGKVECIAPSDPGGGWDFTCRSVGNVMEELDMVPGSVQTLNMAGAGGGVAYAHT VSKRAGDDHLLVAASTATTTRLAQGQFQGLDADMVNWIGALGADYGVIAVSKDSPYQNLNELMEALKEDPRSVKFAGGSA KGGWDHLKVLIAAQAADVDNLPRIPYLSYNNGGEAMTQVVGGHVDAFTGDITEAQGFMESGDLRVLAVLADERLPGEFSD IPTAKEQGIDAVGPNWRGFYMPADISDEAKQYWVDAVDELYASDEWKKVMKNNGLMPFHVSGAEFEEFVHQQIQDIQSLS KEIGLIKQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35125; Mature: 34994
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKTPLKLVMAAALTLGASSAMAFEPSGKVECIAPSDPGGGWDFTCRSVGNVMEELDMV CCCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC PGSVQTLNMAGAGGGVAYAHTVSKRAGDDHLLVAASTATTTRLAQGQFQGLDADMVNWIG CCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHCCHHCCCCHHHHHHHH ALGADYGVIAVSKDSPYQNLNELMEALKEDPRSVKFAGGSAKGGWDHLKVLIAAQAADVD HHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC NLPRIPYLSYNNGGEAMTQVVGGHVDAFTGDITEAQGFMESGDLRVLAVLADERLPGEFS CCCCCCEEEECCCHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCC DIPTAKEQGIDAVGPNWRGFYMPADISDEAKQYWVDAVDELYASDEWKKVMKNNGLMPFH CCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEE VSGAEFEEFVHQQIQDIQSLSKEIGLIKQ ECCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AFKTPLKLVMAAALTLGASSAMAFEPSGKVECIAPSDPGGGWDFTCRSVGNVMEELDMV CCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC PGSVQTLNMAGAGGGVAYAHTVSKRAGDDHLLVAASTATTTRLAQGQFQGLDADMVNWIG CCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHCCHHCCCCHHHHHHHH ALGADYGVIAVSKDSPYQNLNELMEALKEDPRSVKFAGGSAKGGWDHLKVLIAAQAADVD HHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC NLPRIPYLSYNNGGEAMTQVVGGHVDAFTGDITEAQGFMESGDLRVLAVLADERLPGEFS CCCCCCEEEECCCHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCC DIPTAKEQGIDAVGPNWRGFYMPADISDEAKQYWVDAVDELYASDEWKKVMKNNGLMPFH CCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEE VSGAEFEEFVHQQIQDIQSLSKEIGLIKQ ECCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]