| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92113530
Identifier: 92113530
GI number: 92113530
Start: 1592258
End: 1593160
Strand: Direct
Name: 92113530
Synonym: Csal_1404
Alternate gene names: NA
Gene position: 1592258-1593160 (Clockwise)
Preceding gene: 92113529
Following gene: 92113531
Centisome position: 43.07
GC content: 44.3
Gene sequence:
>903_bases GTGTTTATGCCTGTTTATGACCAAAAAGAATTTTCCATTGACTTTTTTTCGGGGATGGTTGGTAGCGATGCTGATGGAGG TGTAGATATATTCTCCACCTTCTCAGAGATCTGTGACCTCGAAGAAAGGCCTTCTTATCATCTTGGATCATTCGAGTATC AACTTAGATCTATGAGTAAGGCTGGAGGTACGATTAAAGGAGTCCTTGCGAAATTCAGAACTTCTGACCTTCCTCATGCT GGAAGTCCGGCAGGAGAGGAAAGAGAGCTGGAGCTTGAAGCACAAGAAGGCTTGATAGAAAAAAACCACTTCCTTGTAAA GAAAGATAAATGTGTGGTCGTTTTTCAGAGAAATGGTCATGCTGCCAGGATCGGGCGCCTTAGTGAATATATCTCAAGTT ATTTAGGCGAGACGGTTATTTTTAACCCAATTCTTCAGCCCGATGCTGTAGAGCGTATGCTGGATGATAACTTAGAACCC GTTACTATTGAGTTGTCATACGCACCACCCACTAACCCAGACTATTTTCCTGAGGATGACTGGGGGGAGCGATTTGCTAA GCTTGCTGACTTGGGGAATAGCTCTAGAATAAGAGTGAACTTAAGCGCCGACAGAAGATCTGCTGATCGGGATAAACATA CTCTCTGGCCAGGCTTGAAAAAAGCAGCAGAATCGATAGTTAAAACACGCAATGCTTCTGTTGCTCGTGTTAAATTAACA GATGGTGAGCACGATTATCCGATAGACCTTATTGCGGATAGGCTGACTGACACCCAGCTTGTTGAAATGAGAGGTAGGTA TCCAGTGCTCGACTCAATGTTTGCTGCTTTAGCGAATAGCTACGGCTCCTTGAGAGATGACATCAATGAAATTTTTGGAC AGCCGGATCGCCGCGTTTCTTAG
Upstream 100 bases:
>100_bases CAAGAATAGATGCACGAAGTGAAGATTTGTATATTTTGAGCTTCATTTAAGAATCTGTTGTTTTTTAATTATAAATTAAT ATAAGGCTTGATAGTGCGAG
Downstream 100 bases:
>100_bases TGTTTTGTTATCCGCTTATTTTGGTTACAAAACCTATTGTAGCTTAAGCGGGTATGAAGATTTAAGACTGTCTGCCAGTG TTTTTTCGACACTGGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MFMPVYDQKEFSIDFFSGMVGSDADGGVDIFSTFSEICDLEERPSYHLGSFEYQLRSMSKAGGTIKGVLAKFRTSDLPHA GSPAGEERELELEAQEGLIEKNHFLVKKDKCVVVFQRNGHAARIGRLSEYISSYLGETVIFNPILQPDAVERMLDDNLEP VTIELSYAPPTNPDYFPEDDWGERFAKLADLGNSSRIRVNLSADRRSADRDKHTLWPGLKKAAESIVKTRNASVARVKLT DGEHDYPIDLIADRLTDTQLVEMRGRYPVLDSMFAALANSYGSLRDDINEIFGQPDRRVS
Sequences:
>Translated_300_residues MFMPVYDQKEFSIDFFSGMVGSDADGGVDIFSTFSEICDLEERPSYHLGSFEYQLRSMSKAGGTIKGVLAKFRTSDLPHA GSPAGEERELELEAQEGLIEKNHFLVKKDKCVVVFQRNGHAARIGRLSEYISSYLGETVIFNPILQPDAVERMLDDNLEP VTIELSYAPPTNPDYFPEDDWGERFAKLADLGNSSRIRVNLSADRRSADRDKHTLWPGLKKAAESIVKTRNASVARVKLT DGEHDYPIDLIADRLTDTQLVEMRGRYPVLDSMFAALANSYGSLRDDINEIFGQPDRRVS >Mature_300_residues MFMPVYDQKEFSIDFFSGMVGSDADGGVDIFSTFSEICDLEERPSYHLGSFEYQLRSMSKAGGTIKGVLAKFRTSDLPHA GSPAGEERELELEAQEGLIEKNHFLVKKDKCVVVFQRNGHAARIGRLSEYISSYLGETVIFNPILQPDAVERMLDDNLEP VTIELSYAPPTNPDYFPEDDWGERFAKLADLGNSSRIRVNLSADRRSADRDKHTLWPGLKKAAESIVKTRNASVARVKLT DGEHDYPIDLIADRLTDTQLVEMRGRYPVLDSMFAALANSYGSLRDDINEIFGQPDRRVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33681; Mature: 33681
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMPVYDQKEFSIDFFSGMVGSDADGGVDIFSTFSEICDLEERPSYHLGSFEYQLRSMSK CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AGGTIKGVLAKFRTSDLPHAGSPAGEERELELEAQEGLIEKNHFLVKKDKCVVVFQRNGH CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCHHCCCEEEECCCEEEEEECCCC AARIGRLSEYISSYLGETVIFNPILQPDAVERMLDDNLEPVTIELSYAPPTNPDYFPEDD HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCH WGERFAKLADLGNSSRIRVNLSADRRSADRDKHTLWPGLKKAAESIVKTRNASVARVKLT HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCEEEEEEC DGEHDYPIDLIADRLTDTQLVEMRGRYPVLDSMFAALANSYGSLRDDINEIFGQPDRRVS CCCCCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFMPVYDQKEFSIDFFSGMVGSDADGGVDIFSTFSEICDLEERPSYHLGSFEYQLRSMSK CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AGGTIKGVLAKFRTSDLPHAGSPAGEERELELEAQEGLIEKNHFLVKKDKCVVVFQRNGH CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCHHCCCEEEECCCEEEEEECCCC AARIGRLSEYISSYLGETVIFNPILQPDAVERMLDDNLEPVTIELSYAPPTNPDYFPEDD HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCH WGERFAKLADLGNSSRIRVNLSADRRSADRDKHTLWPGLKKAAESIVKTRNASVARVKLT HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCEEEEEEC DGEHDYPIDLIADRLTDTQLVEMRGRYPVLDSMFAALANSYGSLRDDINEIFGQPDRRVS CCCCCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA