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The map label for this gene is yjbI [H]

Identifier: 92113452

GI number: 92113452

Start: 1514588

End: 1515007

Strand: Direct

Name: yjbI [H]

Synonym: Csal_1326

Alternate gene names: 92113452

Gene position: 1514588-1515007 (Clockwise)

Preceding gene: 92113451

Following gene: 92113454

Centisome position: 40.97

GC content: 67.38

Gene sequence:

>420_bases
ATGAAACCTCATGACGAATCCCGTCAGTCGCGCGTCTTCGGCGTCGGTGACAGCACGCTGCGCGCCGTGGGCGGGGAGGC
GGCGGTACGCGAGCTGGTGGATCGCTTCTATGATGCCATGGAGCGCCTGCCCGAGGCGCGGGGGATTCGCGCCCTGCACC
CCGCCGATCTCGACGAGTCCCGCGACAAGCTGACGACGTTTCTGATCGGCTGGATGGGCGGTCCGAGCCGTTATCGCGAG
CGTTTCGGGCCGATCGCCATCCCCGCGGCGCATCGTCACCTGGATATCGGCCCCGAGGAGCGCGATGCCTGGCTGGCCTG
CATGGCGACGGCGCTGGAGGAAATCGGTGCGGCGGATGATCTCAAGCGCTACTTGCTGACCCAGCTGCGTCATCCTGCCG
AGATGTGCCGCCGCCGTTGA

Upstream 100 bases:

>100_bases
CACGTCATGGTGCGCGACGGCCAGGTTACTGCGCCCGAAGCACTCGGCCGTGCGCCCGGCGAGGCCAGCCTGTTCGGCAT
TCACGTGACGGAGCCGGCCG

Downstream 100 bases:

>100_bases
GGGCGGCGGGCCTTTTCATGATCACTCTCATGACGACTTTCATGACCCCTCTCATGACGATGCATCGGCCTGGGCGTCGA
GCTCGGCGCGCCAGGCCTGC

Product: globin

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKPHDESRQSRVFGVGDSTLRAVGGEAAVRELVDRFYDAMERLPEARGIRALHPADLDESRDKLTTFLIGWMGGPSRYRE
RFGPIAIPAAHRHLDIGPEERDAWLACMATALEEIGAADDLKRYLLTQLRHPAEMCRRR

Sequences:

>Translated_139_residues
MKPHDESRQSRVFGVGDSTLRAVGGEAAVRELVDRFYDAMERLPEARGIRALHPADLDESRDKLTTFLIGWMGGPSRYRE
RFGPIAIPAAHRHLDIGPEERDAWLACMATALEEIGAADDLKRYLLTQLRHPAEMCRRR
>Mature_139_residues
MKPHDESRQSRVFGVGDSTLRAVGGEAAVRELVDRFYDAMERLPEARGIRALHPADLDESRDKLTTFLIGWMGGPSRYRE
RFGPIAIPAAHRHLDIGPEERDAWLACMATALEEIGAADDLKRYLLTQLRHPAEMCRRR

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15753; Mature: 15753

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS01213 GLOBIN_FAM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPHDESRQSRVFGVGDSTLRAVGGEAAVRELVDRFYDAMERLPEARGIRALHPADLDES
CCCCCCCHHCCEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCHH
RDKLTTFLIGWMGGPSRYRERFGPIAIPAAHRHLDIGPEERDAWLACMATALEEIGAADD
HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
LKRYLLTQLRHPAEMCRRR
HHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MKPHDESRQSRVFGVGDSTLRAVGGEAAVRELVDRFYDAMERLPEARGIRALHPADLDES
CCCCCCCHHCCEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCHH
RDKLTTFLIGWMGGPSRYRERFGPIAIPAAHRHLDIGPEERDAWLACMATALEEIGAADD
HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
LKRYLLTQLRHPAEMCRRR
HHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]