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The map label for this gene is dadA

Identifier: 92113444

GI number: 92113444

Start: 1501756

End: 1503015

Strand: Direct

Name: dadA

Synonym: Csal_1318

Alternate gene names: 92113444

Gene position: 1501756-1503015 (Clockwise)

Preceding gene: 92113443

Following gene: 92113445

Centisome position: 40.62

GC content: 64.68

Gene sequence:

>1260_bases
ATGCAGGTACTCATTCTCGGTAGTGGCGTCGTCGGGGTCACCAGCGCCTATTACCTGGCGACCCAGGGGCACGAGGTCAC
GGTGGTGGATCGTCGCGAGGCCCCCGCCATGGAAACCAGCTACGGCAATGCCGGTCAGGTGTCGTTCGGGTTTTCCTCCC
CCTGGGCGGCGCCCGGCATCCCGCGCAAGGCACTCAAGTGGATGTTCCAGGAGCATGCACCGCTGAAGATTCAGCCCAAG
CGCGACCCTGCCATGGCACGCTTCATGATGGCGATGTTCAACAACTGCACGCCCGAGCGCTATGCCGTCAACAAGGAGCG
CATGGTGCGTGTCGCCGAGTACAGCCGCCAATGCATCGATGCACTGCGCCGCGATACGGGAATTCGCTACGAGGATCGCC
AGCGCGGTCTGCTGCAGCTTTTCCGGCATGAATCGCAGGTCGAGGCGGCTGGCAAGGACATGCGGGTGTTGAGTGAATGC
GGCGTGCGTCACCGGCTGCTGGGTGCCGAGGAACTGGTGACGGCCGAACCGGCACTGGCGCGCGTGCCGGGCAAGTTCGT
GGGCGGGCTGCACTTGCCCGACGATCAGACCGGCGATTGCCACTTGTTCACGCAACGCCTGGCCGAGCATTGTCGCGAGC
ACCTGGGGGTCACGTTCCGCTTCGGTGTGGATGTTCAGCGTATCGAACGCCAGGCCGGGCGCGTGGAGCGCGTGGTCACG
TCGGCGGGCTCTCTTCGAGCGGATGCCTATGTGGTGTGCCTGGGCAGCTTCTCGCCGCTGCTGGTCAAGGACCTGGATAT
CCGCTTGCCGATTTATCCGGTCAAGGGGTATAGCCTGACGCTGCCGGTGACCGACGATGGGGGCGCGCCTCAATCCACGG
TCATGGACGAGACCTTCAAGGTCGCGATCTCGCGTTTCGACGACCGGATACGTGTCGGTGGTACCGCCGAGTTGGCCTCC
TACGATCTGAGCCTGCTGGAAAAGCGGCGTGCGACCATCAGCATGGTGGTGCGCGATGTCTTTCCTGAAGGCGGCGACGC
GGCCAAGGCCGAGTTCTGGACCGGGCTGCGCCCGATGACCCCGGATTCGACGCCGATCATCGGCGCCACGCGTTACGACA
ACCTCTGGCTCAACACCGGTCATGGCACTCTCGGTTGGACGATGAGCTGCGGCAGTGCCCATCTGCTCGCCGATTTGATG
GCCGGGCGTCGGCCCGCCATCGACCCCATCGGACTGGACGTCTCCCGCTACGCCGCGTGA

Upstream 100 bases:

>100_bases
CATCAAGCATGTGATAGCGTCAATACAAAATATTCCACTGGTTTTCTCGTCTTATACTGGCGCTTCTTTTCAGTGCGTTC
AGTACAGAGGCGAGGCATCC

Downstream 100 bases:

>100_bases
TTTCGTCGACAGGGGAATCCCTGCGGGCTTCGCTTGTCCAATACTGGCATTCGTCCCGGTTCCTGCTGTGAGCCGGGATG
CCATGAAAGCGGAAAGCGAC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MQVLILGSGVVGVTSAYYLATQGHEVTVVDRREAPAMETSYGNAGQVSFGFSSPWAAPGIPRKALKWMFQEHAPLKIQPK
RDPAMARFMMAMFNNCTPERYAVNKERMVRVAEYSRQCIDALRRDTGIRYEDRQRGLLQLFRHESQVEAAGKDMRVLSEC
GVRHRLLGAEELVTAEPALARVPGKFVGGLHLPDDQTGDCHLFTQRLAEHCREHLGVTFRFGVDVQRIERQAGRVERVVT
SAGSLRADAYVVCLGSFSPLLVKDLDIRLPIYPVKGYSLTLPVTDDGGAPQSTVMDETFKVAISRFDDRIRVGGTAELAS
YDLSLLEKRRATISMVVRDVFPEGGDAAKAEFWTGLRPMTPDSTPIIGATRYDNLWLNTGHGTLGWTMSCGSAHLLADLM
AGRRPAIDPIGLDVSRYAA

Sequences:

>Translated_419_residues
MQVLILGSGVVGVTSAYYLATQGHEVTVVDRREAPAMETSYGNAGQVSFGFSSPWAAPGIPRKALKWMFQEHAPLKIQPK
RDPAMARFMMAMFNNCTPERYAVNKERMVRVAEYSRQCIDALRRDTGIRYEDRQRGLLQLFRHESQVEAAGKDMRVLSEC
GVRHRLLGAEELVTAEPALARVPGKFVGGLHLPDDQTGDCHLFTQRLAEHCREHLGVTFRFGVDVQRIERQAGRVERVVT
SAGSLRADAYVVCLGSFSPLLVKDLDIRLPIYPVKGYSLTLPVTDDGGAPQSTVMDETFKVAISRFDDRIRVGGTAELAS
YDLSLLEKRRATISMVVRDVFPEGGDAAKAEFWTGLRPMTPDSTPIIGATRYDNLWLNTGHGTLGWTMSCGSAHLLADLM
AGRRPAIDPIGLDVSRYAA
>Mature_419_residues
MQVLILGSGVVGVTSAYYLATQGHEVTVVDRREAPAMETSYGNAGQVSFGFSSPWAAPGIPRKALKWMFQEHAPLKIQPK
RDPAMARFMMAMFNNCTPERYAVNKERMVRVAEYSRQCIDALRRDTGIRYEDRQRGLLQLFRHESQVEAAGKDMRVLSEC
GVRHRLLGAEELVTAEPALARVPGKFVGGLHLPDDQTGDCHLFTQRLAEHCREHLGVTFRFGVDVQRIERQAGRVERVVT
SAGSLRADAYVVCLGSFSPLLVKDLDIRLPIYPVKGYSLTLPVTDDGGAPQSTVMDETFKVAISRFDDRIRVGGTAELAS
YDLSLLEKRRATISMVVRDVFPEGGDAAKAEFWTGLRPMTPDSTPIIGATRYDNLWLNTGHGTLGWTMSCGSAHLLADLM
AGRRPAIDPIGLDVSRYAA

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=418, Percent_Identity=54.5454545454545, Blast_Score=476, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_CHRSD (Q1QXY5)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_573372.1
- ProteinModelPortal:   Q1QXY5
- STRING:   Q1QXY5
- GeneID:   4027772
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_1318
- NMPDR:   fig|290398.4.peg.1308
- eggNOG:   COG0665
- HOGENOM:   HBG729204
- OMA:   LEHAGGQ
- ProtClustDB:   PRK00711
- BioCyc:   CSAL290398:CSAL_1318-MONOMER
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 46287; Mature: 46287

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLILGSGVVGVTSAYYLATQGHEVTVVDRREAPAMETSYGNAGQVSFGFSSPWAAPGI
CEEEEEECCHHHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC
PRKALKWMFQEHAPLKIQPKRDPAMARFMMAMFNNCTPERYAVNKERMVRVAEYSRQCID
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH
ALRRDTGIRYEDRQRGLLQLFRHESQVEAAGKDMRVLSECGVRHRLLGAEELVTAEPALA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHCCHHHHHCCCCHHH
RVPGKFVGGLHLPDDQTGDCHLFTQRLAEHCREHLGVTFRFGVDVQRIERQAGRVERVVT
HCCHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
SAGSLRADAYVVCLGSFSPLLVKDLDIRLPIYPVKGYSLTLPVTDDGGAPQSTVMDETFK
CCCCCCCCEEEEEECCCCCEEEECCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHH
VAISRFDDRIRVGGTAELASYDLSLLEKRRATISMVVRDVFPEGGDAAKAEFWTGLRPMT
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC
PDSTPIIGATRYDNLWLNTGHGTLGWTMSCGSAHLLADLMAGRRPAIDPIGLDVSRYAA
CCCCCEEEEEECCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MQVLILGSGVVGVTSAYYLATQGHEVTVVDRREAPAMETSYGNAGQVSFGFSSPWAAPGI
CEEEEEECCHHHHHHEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC
PRKALKWMFQEHAPLKIQPKRDPAMARFMMAMFNNCTPERYAVNKERMVRVAEYSRQCID
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH
ALRRDTGIRYEDRQRGLLQLFRHESQVEAAGKDMRVLSECGVRHRLLGAEELVTAEPALA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHCCHHHHHCCCCHHH
RVPGKFVGGLHLPDDQTGDCHLFTQRLAEHCREHLGVTFRFGVDVQRIERQAGRVERVVT
HCCHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH
SAGSLRADAYVVCLGSFSPLLVKDLDIRLPIYPVKGYSLTLPVTDDGGAPQSTVMDETFK
CCCCCCCCEEEEEECCCCCEEEECCCEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHH
VAISRFDDRIRVGGTAELASYDLSLLEKRRATISMVVRDVFPEGGDAAKAEFWTGLRPMT
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC
PDSTPIIGATRYDNLWLNTGHGTLGWTMSCGSAHLLADLMAGRRPAIDPIGLDVSRYAA
CCCCCEEEEEECCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA